Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 6.2e-70 267.3 133 100.0
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 6.9e-69 263.8 133 97.7
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 6.7e-64 247.3 133 91.0
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 2.4e-61 238.8 133 88.0
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 2.4e-53 212.2 135 77.8
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 5.5e-50 201.1 135 74.1
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-48 196.8 136 73.5
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 5.1e-48 194.5 135 72.6
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 6.7e-48 194.1 135 71.1
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 6.7e-48 194.1 135 69.6
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 8.8e-48 193.7 135 70.4
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 1.4e-45 186.4 135 69.6
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 7.0e-45 184.1 135 69.6
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 9.1e-45 183.7 135 69.6
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 1.3e-43 179.9 133 64.7
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 1.4e-42 176.4 135 63.7
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-42 175.6 137 69.3
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 3.2e-42 175.3 132 65.2
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 5.5e-42 174.5 135 65.9
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 9.4e-42 173.7 135 63.0
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 4.7e-41 171.4 135 65.9
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.0e-39 166.0 129 67.4
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.0e-39 166.0 129 67.4
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 3.3e-39 165.2 135 61.5
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-39 165.2 138 61.6
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.3e-39 165.2 129 67.4
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.7e-38 162.9 129 66.7
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 2.2e-38 162.5 132 62.9
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 1.1e-37 160.2 135 58.5
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-37 159.8 136 61.8
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 5.3e-37 157.9 135 58.5
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 4.5e-36 154.8 138 60.1
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 1.0e-35 153.7 135 58.5
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 2.9e-35 152.1 135 60.0
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 1.5e-34 149.8 135 59.3
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 1.9e-34 149.4 134 59.0
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 5.5e-34 147.9 135 58.5
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 5.5e-34 147.9 135 58.5
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 5.5e-34 147.9 135 58.5
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.4e-34 147.1 137 58.4
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-33 146.7 138 58.7
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.1e-33 146.0 135 55.6
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 3.6e-33 145.2 128 53.9
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 2.3e-32 142.5 136 54.4
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 2.3e-32 142.5 136 54.4
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 8.8e-32 140.6 132 54.5
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 1.2e-31 140.2 136 55.9
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 3.4e-31 138.7 137 53.3
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 9.7e-31 137.1 136 57.4
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 1.3e-30 136.7 137 52.6
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 1.3e-30 136.7 137 52.6
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.3e-30 136.7 135 56.3
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 6.3e-30 134.4 109 62.4
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 6.3e-30 134.4 102 62.7
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 1.4e-29 133.3 131 53.4
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.4e-29 132.5 137 55.5
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 3.1e-29 132.1 133 49.6
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 3.1e-29 132.1 137 54.7
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 7.0e-29 131.0 137 54.0
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 9.1e-29 130.6 95 65.3
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.1e-29 130.6 130 55.4
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-28 129.4 133 54.1
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.5e-28 128.6 103 66.0
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 4.5e-28 128.3 133 53.4
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 5.9e-28 127.9 124 54.8
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 1.0e-27 127.1 137 50.4
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 1.3e-27 126.7 135 48.9
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.7e-27 126.3 135 52.6
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.9e-27 125.6 128 51.6
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 3.8e-27 125.2 139 49.6
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.5e-26 122.5 112 56.2
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 7.2e-26 120.9 108 57.4
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 4.7e-25 118.2 135 52.6
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.6e-23 112.5 82 68.3
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 5.7e-23 111.3 88 63.6
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 7.5e-23 110.9 140 46.4
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.3e-22 110.2 87 64.4
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 1.4e-21 106.7 76 69.7
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 5.4e-21 104.8 126 46.0
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 2.7e-20 102.4 125 44.8
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 2.9e-19 99.0 125 47.2
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 1.5e-18 96.7 134 43.3
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 3.6e-17 92.0 141 42.6
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 8.0e-17 90.9 135 40.0
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 8.0e-17 90.9 135 40.0
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 2.3e-16 89.4 146 42.5
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 2.3e-16 89.4 121 43.0
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 3.0e-16 89.0 138 39.9
Carub.0007s3757 Capsella rubella HOM05D007540 ORTHO05D009531 8.9e-16 87.4 88 53.4
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 2.4e-13 79.3 145 33.8
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 2.4e-13 79.3 145 33.8
SalBow1G0974 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.7e-12 75.9 64 56.2
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.6e-09 66.6 59 62.7
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 3.6e-09 65.5 56 62.5
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 5.2e-08 61.6 34 79.4
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 5.2e-08 61.6 117 32.5
AL3G46820 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 2.6e-07 59.3 80 38.8
PSO675G5260 Papaver somniferum HOM05D015201 ORTHO05D303909 2.2e-06 56.2 63 46.0
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 6.4e-06 54.7 59 54.2


User provided reference genes

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