Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s3098 Capsella rubella HOM05D000192 ORTHO05D000123 2.6e-47 191.8 104 100.0
AL3G49890 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 6.9e-24 114.0 147 53.7
Carub.0003s3099 Capsella rubella HOM05D000192 ORTHO05D000123 2.6e-23 112.1 147 53.7
Carub.0003s3100 Capsella rubella HOM05D000192 ORTHO05D000123 2.6e-23 112.1 147 50.3
CARHR293360 Cardamine hirsuta HOM05D000192 ORTHO05D000123 4.5e-23 111.3 147 51.7
Sp3g30380 Schrenkiella parvula HOM05D000192 ORTHO05D000123 1.0e-22 110.2 108 63.9
Sp3g30370 Schrenkiella parvula HOM05D000192 ORTHO05D000123 1.7e-22 109.4 147 51.0
A07p04030 Brassica napus HOM05D000192 ORTHO05D000123 3.8e-22 108.2 147 53.7
BolC7t41063H Brassica oleracea HOM05D000192 ORTHO05D000123 3.8e-22 108.2 147 53.7
BraA07t28194Z Brassica rapa HOM05D000192 ORTHO05D000123 3.8e-22 108.2 147 53.7
CARHR293380 Cardamine hirsuta HOM05D000192 ORTHO05D000123 5.0e-22 107.8 147 52.4
C03p57870 Brassica napus HOM05D000192 ORTHO05D000123 6.5e-22 107.5 147 50.3
BcaC01g02962 Brassica carinata HOM05D000192 ORTHO05D000123 1.4e-21 106.3 147 50.3
BolC3t18059H Brassica oleracea HOM05D000192 ORTHO05D000123 1.4e-21 106.3 147 50.3
BraA03t13749Z Brassica rapa HOM05D000192 ORTHO05D000123 1.9e-21 105.9 147 51.7
A03p46250 Brassica napus HOM05D000192 ORTHO05D000123 5.5e-21 104.4 147 51.7
Carub.0003s3101 Capsella rubella HOM05D000192 ORTHO05D000123 5.5e-21 104.4 147 49.0
BcaB08g34690 Brassica carinata HOM05D000192 ORTHO05D000123 7.2e-21 104.0 147 49.0
CARHR107390 Cardamine hirsuta HOM05D000192 ORTHO05D000123 7.2e-21 104.0 147 49.7
Sp7g32980 Schrenkiella parvula HOM05D000192 ORTHO05D000123 7.2e-21 104.0 146 52.1
Thhalv10023068m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 9.3e-21 103.6 143 52.4
CARHR293370 Cardamine hirsuta HOM05D000192 ORTHO05D000123 1.6e-20 102.8 147 49.7
AL3G49920 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 2.1e-20 102.4 147 49.7
Carub.0003s3102 Capsella rubella HOM05D000192 ORTHO05D000123 2.1e-20 102.4 147 49.7
BcaC06g36219 Brassica carinata HOM05D000192 ORTHO05D000123 2.7e-20 102.1 147 51.7
C07p06420 Brassica napus HOM05D000192 ORTHO05D000123 2.7e-20 102.1 147 51.7
AT2G17080 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 3.5e-20 101.7 147 49.7
AT2G17070 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 4.6e-20 101.3 147 49.0
BcaB03g16447 Brassica carinata HOM05D000192 ORTHO05D000123 4.6e-20 101.3 147 52.4
BcaNung04608 Brassica carinata HOM05D000192 ORTHO05D000123 6.1e-20 100.9 147 48.3
Aa31LG8G14390 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.0e-19 100.1 145 49.7
Aa31sc739G40 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.0e-19 100.1 143 51.0
BcaNung02383 Brassica carinata HOM05D000192 ORTHO05D000123 1.0e-19 100.1 147 48.3
C07p61040 Brassica napus HOM05D000192 ORTHO05D000123 1.0e-19 100.1 147 48.3
BolC7t46529H Brassica oleracea HOM05D000192 ORTHO05D000123 1.0e-19 100.1 147 48.3
Thhalv10027348m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 1.0e-19 100.1 147 49.7
Sp3g30360 Schrenkiella parvula HOM05D000192 ORTHO05D000123 1.0e-19 100.1 143 47.6
A03p63460 Brassica napus HOM05D000192 ORTHO05D000123 1.8e-19 99.4 147 48.3
Aa31LG2G14690 Aethionema arabicum HOM05D000192 ORTHO05D000123 3.0e-19 98.6 143 49.7
Aa31LG8G14330 Aethionema arabicum HOM05D000192 ORTHO05D000123 3.0e-19 98.6 145 50.3
Thhalv10022833m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 3.0e-19 98.6 143 49.7
Sp7g32970 Schrenkiella parvula HOM05D000192 ORTHO05D000123 3.0e-19 98.6 147 49.0
BolC7t41065H Brassica oleracea HOM05D000192 ORTHO05D000123 3.9e-19 98.2 143 48.3
Thhalv10022962m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 3.9e-19 98.2 147 46.9
Aa31LG8G14370 Aethionema arabicum HOM05D000192 ORTHO05D000123 6.7e-19 97.4 141 48.2
Aa31LG8G14360 Aethionema arabicum HOM05D000192 ORTHO05D000123 8.7e-19 97.1 144 50.0
Aa31sc1096G10 Aethionema arabicum HOM05D000192 ORTHO05D000123 8.7e-19 97.1 145 50.3
BcaC06g36218 Brassica carinata HOM05D000192 ORTHO05D000123 8.7e-19 97.1 145 47.6
C07p06430 Brassica napus HOM05D000192 ORTHO05D000123 8.7e-19 97.1 145 47.6
BolC3t20790H Brassica oleracea HOM05D000192 ORTHO05D000123 8.7e-19 97.1 106 58.5
BcaB03g16446 Brassica carinata HOM05D000192 ORTHO05D000123 1.1e-18 96.7 143 49.0
A07p04040 Brassica napus HOM05D000192 ORTHO05D000123 1.1e-18 96.7 143 47.6
BraA07t28195Z Brassica rapa HOM05D000192 ORTHO05D000123 1.1e-18 96.7 143 47.6
Aa31LG8G14290 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.9e-18 95.9 147 48.3
Aa31LG8G14320 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.9e-18 95.9 146 50.7
BcaC01g00833 Brassica carinata HOM05D000192 ORTHO05D000123 1.9e-18 95.9 144 49.3
C03p84960 Brassica napus HOM05D000192 ORTHO05D000123 1.9e-18 95.9 144 49.3
BolC3t20788H Brassica oleracea HOM05D000192 ORTHO05D000123 1.9e-18 95.9 144 49.3
BraA03t15417Z Brassica rapa HOM05D000192 ORTHO05D000123 1.9e-18 95.9 155 45.2
AL3G49930 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 3.3e-18 95.1 144 48.6
BcaB03g11780 Brassica carinata HOM05D000192 ORTHO05D000123 3.3e-18 95.1 147 46.3
BcaB08g34694 Brassica carinata HOM05D000192 ORTHO05D000123 3.3e-18 95.1 147 49.0
Thhalv10027560m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 3.3e-18 95.1 147 48.3
Aa31LG8G14310 Aethionema arabicum HOM05D000192 ORTHO05D000123 4.3e-18 94.7 145 49.0
Carub.0007s0518 Capsella rubella HOM05D000192 ORTHO05D000123 4.3e-18 94.7 147 48.3
A08p16280 Brassica napus HOM05D000192 ORTHO05D000123 5.7e-18 94.4 144 48.6
BraA08t33598Z Brassica rapa HOM05D000192 ORTHO05D000123 5.7e-18 94.4 144 48.6
BcaNung04607 Brassica carinata HOM05D000192 ORTHO05D000123 7.4e-18 94.0 146 47.9
CARHR243430 Cardamine hirsuta HOM05D000192 ORTHO05D000123 7.4e-18 94.0 146 45.9
Carub.0007s0510 Capsella rubella HOM05D000192 ORTHO05D000123 9.7e-18 93.6 145 47.6
Thhalv10026047m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 1.3e-17 93.2 147 46.9
Aa31sc1096G40 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.6e-17 92.8 142 48.6
AT4G35200 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 1.6e-17 92.8 147 45.6
BcaC01g02952 Brassica carinata HOM05D000192 ORTHO05D000123 2.2e-17 92.4 144 47.2
BolC3t18068H Brassica oleracea HOM05D000192 ORTHO05D000123 2.2e-17 92.4 144 47.2
CARHR243410 Cardamine hirsuta HOM05D000192 ORTHO05D000123 2.2e-17 92.4 147 46.9
C03p57950 Brassica napus HOM05D000192 ORTHO05D000123 4.8e-17 91.3 144 47.9
Aa31LG8G14350 Aethionema arabicum HOM05D000192 ORTHO05D000123 6.3e-17 90.9 146 46.6
Carub.0007s0519 Capsella rubella HOM05D000192 ORTHO05D000123 6.3e-17 90.9 145 45.5
AT4G35210 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 1.1e-16 90.1 144 45.8
BcaB03g11779 Brassica carinata HOM05D000192 ORTHO05D000123 1.1e-16 90.1 145 47.6
C03p84970 Brassica napus HOM05D000192 ORTHO05D000123 1.4e-16 89.7 146 44.5
BcaB08g34691 Brassica carinata HOM05D000192 ORTHO05D000123 2.4e-16 89.0 143 44.8
A08p16290 Brassica napus HOM05D000192 ORTHO05D000123 2.4e-16 89.0 147 44.9
BraA08t33599Z Brassica rapa HOM05D000192 ORTHO05D000123 2.4e-16 89.0 147 44.9
A03p46260 Brassica napus HOM05D000192 ORTHO05D000123 9.0e-16 87.0 144 45.1
BraA03t13750Z Brassica rapa HOM05D000192 ORTHO05D000123 9.0e-16 87.0 144 45.1
C03p57880 Brassica napus HOM05D000192 ORTHO05D000123 2.0e-15 85.9 144 44.4
BolC3t18060H Brassica oleracea HOM05D000192 ORTHO05D000123 2.0e-15 85.9 144 44.4
BcaC01g02961 Brassica carinata HOM05D000192 ORTHO05D000123 1.0e-14 83.6 144 43.8
THA.LOC104819669 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 3.8e-14 81.6 150 45.3
THA.LOC104819667 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 2.5e-13 79.0 150 44.7
THA.LOC104819674 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 2.5e-13 79.0 150 44.7
THA.LOC104819672 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 5.5e-13 77.8 150 42.0
BcaNung02385 Brassica carinata HOM05D000192 ORTHO05D000123 3.6e-12 75.1 44 86.4
C07p61050 Brassica napus HOM05D000192 ORTHO05D000123 3.6e-12 75.1 44 86.4
BolC7t46530H Brassica oleracea HOM05D000192 ORTHO05D000123 3.6e-12 75.1 44 86.4
THA.LOC104819678 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 1.0e-11 73.6 150 43.3
THA.LOC104819677 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 2.3e-11 72.4 150 42.7
THA.LOC104819671 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 8.8e-11 70.5 150 42.0
Thhalv10023198m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 1.5e-10 69.7 127 45.7
C03p84980 Brassica napus HOM05D000192 ORTHO05D000123 5.7e-10 67.8 46 73.9
THA.LOC104807391 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 1.3e-09 66.6 159 36.5
BcaC01g00834 Brassica carinata HOM05D000192 ORTHO05D000123 8.2e-09 63.9 132 41.7
Aa31LG2G14610 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.1e-08 63.5 44 72.7
THA.LOC104819668 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 5.3e-08 61.2 155 35.5
THA.LOC104819670 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 9.1e-08 60.5 155 35.5
THA.LOC109116890 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 1.3e-06 56.6 155 34.2
Aa31LG2G14630 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.7e-06 56.2 57 63.2


User provided reference genes

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