Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s3027 Capsella rubella HOM05D002721 ORTHO05D002919 3.0e-35 151.4 79 100.0
Carub.0002s1555 Capsella rubella HOM05D002721 ORTHO05D002919 5.6e-18 94.0 72 75.0
CARHR061780 Cardamine hirsuta HOM05D002721 ORTHO05D002919 8.1e-17 90.1 72 70.8
AT1G68910 Arabidopsis thaliana HOM05D002721 ORTHO05D002919 1.8e-16 89.0 72 70.8
AL2G27940 Arabidopsis lyrata HOM05D002721 ORTHO05D002919 5.3e-16 87.4 72 70.8
Thhalv10018242m.g Eutrema salsugineum HOM05D002721 ORTHO05D002919 3.4e-15 84.7 72 69.4
A02p15490 Brassica napus HOM05D002721 ORTHO05D002919 2.9e-14 81.6 72 68.1
Sp5g24050 Schrenkiella parvula HOM05D002721 ORTHO05D002919 2.9e-14 81.6 72 68.1
C02p25600 Brassica napus HOM05D002721 ORTHO05D002919 3.8e-14 81.3 71 69.0
BolC2t08623H Brassica oleracea HOM05D002721 ORTHO05D002919 3.8e-14 81.3 71 69.0
Aa31sc12G170 Aethionema arabicum HOM05D002721 ORTHO05D002919 4.2e-13 77.8 72 63.9
BcaB03g15864 Brassica carinata HOM05D002721 ORTHO05D002919 4.2e-13 77.8 72 63.9
BraA02t06610Z Brassica rapa HOM05D002721 ORTHO05D002919 7.1e-13 77.0 71 64.8
Sp5g20040 Schrenkiella parvula HOM05D002721 ORTHO05D002919 3.0e-11 71.6 73 60.3
BcaC08g46345 Brassica carinata HOM05D002721 ORTHO05D002919 5.1e-11 70.9 72 59.7
C06p40920 Brassica napus HOM05D002721 ORTHO05D002919 5.1e-11 70.9 72 59.7
BolC6t39341H Brassica oleracea HOM05D002721 ORTHO05D002919 5.1e-11 70.9 72 59.7
A07p35320 Brassica napus HOM05D002721 ORTHO05D002919 1.1e-10 69.7 72 58.3
BraA07t31125Z Brassica rapa HOM05D002721 ORTHO05D002919 1.1e-10 69.7 72 58.3
BolC6t39336H Brassica oleracea HOM05D002721 ORTHO05D002919 1.6e-09 65.9 58 63.8
BcaC08g46344 Brassica carinata HOM05D002721 ORTHO05D002919 2.8e-09 65.1 58 62.1
Duzib251G0850 Durio zibethinus HOM05D002721 ORTHO05D002919 6.4e-06 53.9 72 44.4
Cpa.g.sc570.3 Carica papaya HOM05D002721 ORTHO05D002919 8.4e-06 53.5 83 42.2


User provided reference genes

Program Settings