Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s2644 Capsella rubella HOM05D008968 ORTHO05D012182 5.4e-43 177.2 84 100.0
CARHR044690 Cardamine hirsuta HOM05D008968 ORTHO05D012182 1.1e-14 83.2 80 50.0
Carub.0001s4359 Capsella rubella HOM05D008968 ORTHO05D012182 2.0e-13 79.0 81 43.2
CARHR034210 Cardamine hirsuta HOM05D008968 ORTHO05D017410 2.6e-13 78.6 80 50.0
AL1G63090 Arabidopsis lyrata HOM05D008968 ORTHO05D012182 3.4e-13 78.2 80 48.8
Carub.0003s2791 Capsella rubella HOM05D008968 ORTHO05D012182 7.6e-13 77.0 84 54.8
BolC2t07076H Brassica oleracea HOM05D008968 ORTHO05D027951 9.9e-13 76.6 82 51.2
BcaC08g43601 Brassica carinata HOM05D008968 ORTHO05D017410 1.7e-12 75.9 80 50.0
C06p09990 Brassica napus HOM05D008968 ORTHO05D017410 1.7e-12 75.9 82 48.8
BolC6t36072H Brassica oleracea HOM05D008968 ORTHO05D017410 1.7e-12 75.9 82 48.8
A06p00450 Brassica napus HOM05D008968 ORTHO05D017410 2.2e-12 75.5 80 50.0
BraA06t23259Z Brassica rapa HOM05D008968 ORTHO05D017410 2.2e-12 75.5 80 50.0
BcaB04g16993 Brassica carinata HOM05D008968 ORTHO05D012182 3.8e-12 74.7 80 48.8
BcaB07g33237 Brassica carinata HOM05D008968 ORTHO05D012182 6.4e-12 73.9 80 46.2
BcaB06g28097 Brassica carinata HOM05D008968 ORTHO05D012182 1.1e-11 73.2 80 46.2
A06p00390 Brassica napus HOM05D008968 ORTHO05D012182 1.1e-11 73.2 80 46.2
Carub.0001s4360 Capsella rubella HOM05D008968 ORTHO05D012182 1.1e-11 73.2 81 46.9
AL1G50280 Arabidopsis lyrata HOM05D008968 ORTHO05D017410 1.4e-11 72.8 80 52.5
BolC6t36084H Brassica oleracea HOM05D008968 ORTHO05D012182 1.4e-11 72.8 80 46.2
Thhalv10012111m.g Eutrema salsugineum HOM05D008968 ORTHO05D012182 1.9e-11 72.4 80 45.0
BNapus_Darmor_BZH_scaffold_38p01330 Brassica napus HOM05D008968 ORTHO05D027951 2.4e-11 72.0 86 51.2
C02p10450 Brassica napus HOM05D008968 ORTHO05D027951 2.4e-11 72.0 86 51.2
BraA02t05597Z Brassica rapa HOM05D008968 ORTHO05D027951 2.4e-11 72.0 86 51.2
Sp1g40760 Schrenkiella parvula HOM05D008968 ORTHO05D012182 4.1e-11 71.2 80 46.2
A08p00960 Brassica napus HOM05D008968 ORTHO05D012182 5.4e-11 70.9 80 45.0
BraA08t32151Z Brassica rapa HOM05D008968 ORTHO05D012182 5.4e-11 70.9 80 45.0
Carub.0001s3304 Capsella rubella HOM05D008968 ORTHO05D017410 9.2e-11 70.1 81 44.4
BcaC08g43607 Brassica carinata HOM05D008968 ORTHO05D012182 1.2e-10 69.7 80 45.0
C06p10100 Brassica napus HOM05D008968 ORTHO05D012182 1.2e-10 69.7 80 45.0
AT1G35435 Arabidopsis thaliana HOM05D008968 ORTHO05D017410 3.0e-09 65.1 80 45.0
A08p01010 Brassica napus HOM05D008968 ORTHO05D012182 1.1e-08 63.2 80 46.2
Carub.0003s2874 Capsella rubella HOM05D008968 ORTHO05D012182 1.5e-08 62.8 49 57.1
C03p92230 Brassica napus HOM05D008968 ORTHO05D012182 4.3e-08 61.2 67 50.7
BcaC01g01460 Brassica carinata HOM05D008968 ORTHO05D012182 9.6e-08 60.1 80 45.0
BcaC01g01464 Brassica carinata HOM05D008968 ORTHO05D012182 9.6e-08 60.1 80 45.0
C03p92250 Brassica napus HOM05D008968 ORTHO05D012182 9.6e-08 60.1 80 45.0
BraA08t32153Z Brassica rapa HOM05D008968 ORTHO05D012182 2.1e-07 58.9 67 49.3


User provided reference genes

Program Settings