Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s2489 Capsella rubella HOM05D000050 ORTHO05D009634 2.0e-127 459.1 240 100.0
AL3G40050 Arabidopsis lyrata HOM05D000050 ORTHO05D009634 1.2e-74 283.9 239 70.3
AT3G24515 Arabidopsis thaliana HOM05D000050 ORTHO05D009634 7.5e-74 281.2 237 67.9
Thhalv10002966m.g Eutrema salsugineum HOM05D000050 ORTHO05D009634 2.7e-47 193.0 250 52.8
BolC3t17653H Brassica oleracea HOM05D000050 ORTHO05D009634 1.5e-45 187.2 259 54.4
C03p53970 Brassica napus HOM05D000050 ORTHO05D009634 7.4e-45 184.9 254 54.7
BcaC01g03305 Brassica carinata HOM05D000050 ORTHO05D009634 1.3e-44 184.1 256 54.7
C03p53880 Brassica napus HOM05D000050 ORTHO05D009634 1.1e-43 181.0 254 54.3
CARHR100640 Cardamine hirsuta HOM05D000050 ORTHO05D009634 2.0e-42 176.8 247 52.6
A03p43750 Brassica napus HOM05D000050 ORTHO05D009634 2.4e-40 169.9 258 50.4
BraA03t13510Z Brassica rapa HOM05D000050 ORTHO05D009634 2.4e-40 169.9 258 50.4
BolC3t17649H Brassica oleracea HOM05D000050 ORTHO05D009634 3.7e-36 156.0 258 46.9
A03p43730 Brassica napus HOM05D000050 ORTHO05D009634 4.6e-31 139.0 164 57.9
BraA03t13508Z Brassica rapa HOM05D000050 ORTHO05D009634 4.6e-31 139.0 164 57.9
C03p53950 Brassica napus HOM05D000050 ORTHO05D009634 1.4e-24 117.5 169 53.8
C03p53840 Brassica napus HOM05D000050 ORTHO05D009634 4.2e-16 89.4 173 46.8
THA.LOC104821637 Tarenaya hassleriana HOM05D000050 ORTHO05D009634 2.5e-08 63.5 304 31.2


User provided reference genes

Program Settings