Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s2029 Capsella rubella HOM05D010457 ORTHO05D002434 9.2e-62 240.0 114 100.0
CARHR095990 Cardamine hirsuta HOM05D003074 ORTHO05D002434 2.1e-34 149.1 114 71.1
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 9.6e-27 123.6 114 58.8
BcaC05g28318 Brassica carinata HOM05D010457 ORTHO05D002434 2.1e-26 122.5 120 58.3
C05p44000 Brassica napus HOM05D010457 ORTHO05D002434 2.1e-26 122.5 120 58.3
BolC5t33118H Brassica oleracea HOM05D010457 ORTHO05D002434 2.1e-26 122.5 120 58.3
BraA05t21736Z Brassica rapa HOM05D010457 ORTHO05D002434 2.4e-25 119.0 119 58.8
A05p28590 Brassica napus HOM05D010457 ORTHO05D002434 1.2e-24 116.7 119 56.3
BcaB06g26099 Brassica carinata HOM05D010457 ORTHO05D002434 7.1e-22 107.5 123 53.7
BcaC01g03566 Brassica carinata HOM05D010457 ORTHO05D002434 1.6e-21 106.3 118 55.1
BolC3t17394H Brassica oleracea HOM05D010457 ORTHO05D002434 1.6e-21 106.3 118 55.1
BcaB04g20658 Brassica carinata HOM05D010457 ORTHO05D002434 2.3e-20 102.4 124 50.0
C01p43750 Brassica napus HOM05D010457 ORTHO05D002434 2.3e-20 102.4 121 52.1
C03p51080 Brassica napus HOM05D010457 ORTHO05D002434 2.3e-20 102.4 118 53.4
BolC1t04334H Brassica oleracea HOM05D010457 ORTHO05D002434 2.3e-20 102.4 121 52.1
BcaC09g48988 Brassica carinata HOM05D010457 ORTHO05D002434 3.9e-20 101.7 121 51.2
Aa31LG8G7150 Aethionema arabicum HOM05D010457 ORTHO05D002434 1.1e-19 100.1 112 52.7
AL3G34060 Arabidopsis lyrata HOM05D010457 ORTHO05D002434 7.3e-19 97.4 115 48.7
Sp3g18370 Schrenkiella parvula HOM05D010457 ORTHO05D002434 9.6e-19 97.1 124 47.6
AT3G20340 Arabidopsis thaliana HOM05D010457 ORTHO05D002434 2.1e-18 95.9 115 50.4
BraA01t03531Z Brassica rapa HOM05D010457 ORTHO05D002434 9.0e-17 90.5 120 45.8
A01p34340 Brassica napus HOM05D010457 ORTHO05D002434 1.5e-16 89.7 122 45.1
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 2.4e-14 82.4 126 38.1
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.1e-12 74.7 123 37.4
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 6.7e-12 74.3 111 36.0
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.1e-11 73.6 112 37.5
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 1.1e-11 73.6 134 36.6
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 1.1e-11 73.6 129 34.9
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.1e-11 73.6 117 37.6
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.9e-11 72.8 125 34.4
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 2.5e-11 72.4 125 35.2
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 2.5e-11 72.4 122 36.1
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.6e-11 71.2 122 36.1
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 5.6e-11 71.2 122 36.1
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 5.6e-11 71.2 128 36.7
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 7.4e-11 70.9 117 35.9
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 7.4e-11 70.9 124 38.7
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 1.3e-10 70.1 111 40.5
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 1.3e-10 70.1 111 40.5
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.3e-10 70.1 122 36.9
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.3e-10 70.1 117 37.6
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.6e-10 69.7 128 35.9
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 2.1e-10 69.3 123 34.1
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 4.8e-10 68.2 120 32.5
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.8e-10 68.2 120 34.2
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 4.8e-10 68.2 132 34.8
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 6.2e-10 67.8 117 35.9
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 6.2e-10 67.8 119 38.7
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 1.1e-09 67.0 111 33.3
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 1.1e-09 67.0 112 34.8
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 2.4e-09 65.9 111 35.1
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.1e-09 65.5 127 31.5
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.1e-09 65.5 124 32.3
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.0e-09 65.1 120 35.8
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 5.3e-09 64.7 129 33.3
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 5.3e-09 64.7 125 32.8
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 9.0e-09 63.9 133 33.8
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 9.0e-09 63.9 119 36.1
Eucgr.E04065 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.5e-08 63.2 126 31.0
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 2.0e-08 62.8 116 33.6
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 2.0e-08 62.8 138 29.7
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 2.0e-08 62.8 139 30.9
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 2.0e-08 62.8 138 29.7
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 2.6e-08 62.4 112 33.0
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 2.6e-08 62.4 127 33.1
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 4.5e-08 61.6 129 37.2
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 4.5e-08 61.6 115 33.9
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 7.6e-08 60.8 120 34.2
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 7.6e-08 60.8 123 31.7
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.3e-07 60.1 116 33.6
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.7e-07 59.7 144 33.3
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.7e-07 59.7 125 31.2
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 2.2e-07 59.3 113 31.9
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 2.9e-07 58.9 115 33.0
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 2.9e-07 58.9 134 29.9
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.9e-07 58.9 122 33.6
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 2.9e-07 58.9 111 33.3
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 2.9e-07 58.9 112 31.2
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 4.9e-07 58.2 117 33.3
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 6.4e-07 57.8 142 31.0
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 8.4e-07 57.4 125 32.0
Aqoxy1G02175 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 8.4e-07 57.4 88 38.6
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 8.4e-07 57.4 115 33.0
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 1.1e-06 57.0 120 31.7
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 1.1e-06 57.0 126 33.3
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.1e-06 57.0 118 33.9
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.1e-06 57.0 125 33.6
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.4e-06 56.6 116 30.2
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 1.4e-06 56.6 119 31.9
Gohir.D10G012900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.9e-06 56.2 118 33.1
Gorai.011G014600 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.9e-06 56.2 118 33.1
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.9e-06 56.2 117 32.5
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 1.9e-06 56.2 116 33.6
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 2.4e-06 55.8 129 30.2
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 2.4e-06 55.8 111 33.3
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 2.4e-06 55.8 118 33.9
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.2e-06 55.5 125 32.8
Lj6g0015217 Lotus japonicus HOM05D003074 ORTHO05D002434 3.2e-06 55.5 114 36.0
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 3.2e-06 55.5 112 33.0
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 4.2e-06 55.1 115 28.7
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 4.2e-06 55.1 129 30.2
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 4.2e-06 55.1 122 32.0
Aqoxy1G02177 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 5.5e-06 54.7 81 34.6
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 5.5e-06 54.7 117 32.5
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 5.5e-06 54.7 120 30.8
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 7.1e-06 54.3 118 33.9
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 7.1e-06 54.3 112 33.0
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 7.1e-06 54.3 113 33.6
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 9.3e-06 53.9 119 29.4
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 9.3e-06 53.9 118 34.7
Sabra16G0289700 Salix brachista HOM05D003074 ORTHO05D002434 9.3e-06 53.9 117 34.2


User provided reference genes

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