Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 5.7e-151 537.7 305 100.0
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 2.9e-102 375.9 306 76.1
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 6.4e-102 374.8 304 77.6
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 2.3e-96 356.3 305 67.5
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.7e-94 350.1 308 67.9
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 6.2e-89 331.6 303 67.3
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 3.8e-86 322.4 304 71.7
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 5.4e-85 318.5 305 65.6
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 9.2e-85 317.8 306 65.4
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 6.6e-83 311.6 303 63.4
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 2.1e-73 280.0 283 59.7
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 6.7e-59 231.9 305 49.8
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 2.1e-36 157.1 335 39.7
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 2.8e-33 146.7 336 41.1
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 3.1e-32 143.3 329 39.2
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 3.1e-32 143.3 336 40.2
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 4.1e-32 142.9 346 39.9
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 5.9e-31 139.0 332 39.8
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 6.5e-30 135.6 343 38.8
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 8.5e-30 135.2 335 36.4
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 8.5e-30 135.2 332 38.6
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 3.2e-29 133.3 329 38.6
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 3.2e-29 133.3 338 38.5
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 4.2e-29 132.9 334 38.3
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 5.5e-29 132.5 335 37.6
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 5.5e-29 132.5 339 38.3
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 9.4e-29 131.7 340 37.6
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 2.7e-28 130.2 329 38.9
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 3.9e-27 126.3 337 36.8
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 1.1e-26 124.8 336 36.3
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 1.5e-26 124.4 340 37.9
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 2.0e-26 124.0 338 38.5
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 9.7e-26 121.7 336 38.1
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 6.3e-25 119.0 342 35.1
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 2.4e-24 117.1 311 37.6
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 3.1e-24 116.7 330 37.3
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 9.1e-24 115.2 329 37.1
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 4.5e-23 112.8 347 35.4
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.7e-23 112.1 330 37.3
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.7e-23 112.1 330 37.3
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 7.7e-23 112.1 329 36.8
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 1.0e-22 111.7 335 32.2
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.3e-22 111.3 340 33.2
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 1.9e-21 107.5 331 40.8
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 4.2e-21 106.3 334 36.5
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 7.2e-21 105.5 336 35.4
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 9.4e-21 105.1 339 35.1
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 2.1e-20 104.0 329 34.3
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 3.6e-20 103.2 329 34.3
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 2.3e-19 100.5 339 34.8
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.0e-19 100.1 316 35.1
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 2.0e-18 97.4 336 34.2
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 2.6e-18 97.1 305 36.4
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 4.4e-18 96.3 310 34.2
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 7.5e-18 95.5 346 31.2
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 9.7e-18 95.1 318 34.0
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 1.3e-17 94.7 350 34.3
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 4.8e-17 92.8 302 32.8
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 6.3e-17 92.4 337 35.6
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 1.4e-16 91.3 350 31.7
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 1.8e-16 90.9 332 34.6
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 5.3e-16 89.4 401 30.9
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 2.7e-15 87.0 313 30.4
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 2.7e-15 87.0 340 32.4
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 2.7e-15 87.0 291 30.2
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 3.5e-15 86.7 310 33.5
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 7.7e-15 85.5 303 34.0
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.0e-14 85.1 324 31.8
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 2.9e-14 83.6 313 33.2
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 6.5e-14 82.4 287 35.5
C01p44480 Brassica napus HOM05D006273 ORTHO05D007607 1.9e-13 80.9 57 78.9
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 4.2e-13 79.7 331 31.4
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 9.4e-13 78.6 320 33.8
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 2.1e-12 77.4 315 31.4
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 2.1e-12 77.4 335 31.0
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 2.1e-12 77.4 305 32.5
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 3.6e-12 76.6 316 31.3
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.4e-11 74.7 310 29.7
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 1.8e-11 74.3 335 32.8
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 4.0e-11 73.2 314 32.5
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 1.2e-10 71.6 328 31.1
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 1.5e-10 71.2 343 30.9
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 5.7e-10 69.3 312 32.7
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 7.5e-10 68.9 291 33.0
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.7e-09 67.8 144 43.1
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 6.3e-09 65.9 329 28.3
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 1.4e-08 64.7 328 30.2
Dinv15806 Davidia involucrata HOM05D006273 ORTHO05D007607 2.4e-08 63.9 67 59.7
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 4.1e-08 63.2 113 44.2
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 9.1e-08 62.0 226 29.6
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 1.2e-07 61.6 307 29.0
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.2e-07 61.6 157 37.6
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 1.6e-07 61.2 310 30.0
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 2.0e-07 60.8 331 28.7
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 2.0e-07 60.8 159 37.1
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 3.5e-07 60.1 324 31.2
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 7.7e-07 58.9 385 28.1
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 2.3e-06 57.4 349 30.4
Actinidia27988 Actinidia chinensis HOM05D006273 ORTHO05D007607 3.8e-06 56.6 46 69.6
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 5.0e-06 56.2 244 31.6
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 5.0e-06 56.2 161 37.9
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 5.0e-06 56.2 394 27.4
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 5.0e-06 56.2 329 29.8
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 6.5e-06 55.8 342 29.5


User provided reference genes

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