Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1788 Capsella rubella HOM05D011909 ORTHO05D014045 5.3e-49 197.2 89 100.0
Carub.0003s1791 Capsella rubella HOM05D011909 ORTHO05D014045 1.2e-37 159.5 91 78.0
AT5G45875 Arabidopsis thaliana HOM05D011909 ORTHO05D014045 5.2e-36 154.1 94 74.5
AL3G31350 Arabidopsis lyrata HOM05D011909 ORTHO05D014045 1.8e-33 145.6 92 75.0
Carub.0003s1790 Capsella rubella HOM05D011909 ORTHO05D014045 1.2e-29 132.9 89 67.4
A01p36230 Brassica napus HOM05D011909 ORTHO05D014045 4.4e-27 124.4 88 65.9
BraA01t03698Z Brassica rapa HOM05D011909 ORTHO05D014045 4.4e-27 124.4 88 65.9
C05p47910 Brassica napus HOM05D011909 ORTHO05D014045 4.8e-26 120.9 89 64.0
C01p46060 Brassica napus HOM05D011909 ORTHO05D014045 1.2e-24 116.3 80 65.0
BraA05t21993Z Brassica rapa HOM05D011909 ORTHO05D014045 1.2e-24 116.3 89 62.9
BolC5t33503H Brassica oleracea HOM05D011909 ORTHO05D014045 2.9e-23 111.7 89 61.8
BcaC05g28660 Brassica carinata HOM05D011909 ORTHO05D014045 1.2e-21 106.3 82 62.2
BcaB04g20789 Brassica carinata HOM05D011909 ORTHO05D014045 3.5e-16 88.2 72 61.1
BcaC09g48773 Brassica carinata HOM05D011909 ORTHO05D014045 7.7e-16 87.0 79 50.6
AT4G22105 Arabidopsis thaliana HOM05D009869 ORTHO05D011947 1.7e-10 69.3 89 42.7
Thhalv10027076m.g Eutrema salsugineum HOM05D010042 ORTHO05D012178 2.2e-10 68.9 86 40.7
BolC3t20679H Brassica oleracea HOM05D009869 ORTHO05D011947 4.9e-10 67.8 85 45.9
A01p13430 Brassica napus HOM05D009869 ORTHO05D011947 6.3e-10 67.4 89 42.7
BolC1t01576H Brassica oleracea HOM05D009869 ORTHO05D011947 1.1e-09 66.6 89 40.4
C01p16230 Brassica napus HOM05D009869 ORTHO05D011947 2.4e-09 65.5 89 40.4
AL7G31580 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 3.1e-09 65.1 88 42.0
AL7G31602 Arabidopsis lyrata HOM05D009869 ORTHO05D011947 3.1e-09 65.1 89 38.2
Aa31LG6G15980 Aethionema arabicum HOM05D009869 ORTHO05D011947 4.1e-09 64.7 83 39.8
AL1G26060 Arabidopsis lyrata HOM05D009882 ORTHO05D018440 9.2e-09 63.5 93 38.7
C07p51580 Brassica napus HOM05D009869 ORTHO05D011947 1.6e-08 62.8 88 40.9
A03p53320 Brassica napus HOM05D009869 ORTHO05D011947 2.0e-08 62.4 89 42.7
Carub.0007s1924 Capsella rubella HOM05D009869 ORTHO05D011947 2.0e-08 62.4 89 37.1
C07p51610 Brassica napus HOM05D009869 ORTHO05D011947 2.7e-08 62.0 88 39.8
Carub.0003s2675 Capsella rubella HOM05D041727 ORTHO05D031420 3.5e-08 61.6 81 42.0
Thhalv10026978m.g Eutrema salsugineum HOM05D009869 ORTHO05D011947 3.5e-08 61.6 85 42.4
A03p53290 Brassica napus HOM05D009869 ORTHO05D011947 4.5e-08 61.2 86 40.7
C07p51590 Brassica napus HOM05D009869 ORTHO05D011947 4.5e-08 61.2 88 39.8
CARHR228920 Cardamine hirsuta HOM05D009869 ORTHO05D011947 4.5e-08 61.2 87 40.2
Carub.0003s2552 Capsella rubella HOM05D009869 ORTHO05D011947 1.3e-07 59.7 82 42.7
Aa31LG6G15990 Aethionema arabicum HOM05D009882 ORTHO05D014327 2.3e-07 58.9 78 37.2
AT4G22115 Arabidopsis thaliana HOM05D009869 ORTHO05D011947 2.3e-07 58.9 88 38.6
AL2G19850 Arabidopsis lyrata HOM05D009882 ORTHO05D014327 2.9e-07 58.5 90 37.8
AL2G19860 Arabidopsis lyrata HOM05D009882 ORTHO05D014327 3.9e-07 58.2 90 37.8
Carub.0001s1386 Capsella rubella HOM05D009882 ORTHO05D018440 6.6e-07 57.4 94 38.3
BolC7t45656H Brassica oleracea HOM05D009869 ORTHO05D011947 8.6e-07 57.0 85 40.0
BraA03t14396Z Brassica rapa HOM05D009869 ORTHO05D011947 8.6e-07 57.0 86 41.9
Carub.0002s1059 Capsella rubella HOM05D009882 ORTHO05D014327 8.6e-07 57.0 90 35.6
Carub.0006s2601 Capsella rubella HOM05D009869 ORTHO05D011947 1.1e-06 56.6 82 40.2
Carub.0002s1058 Capsella rubella HOM05D009882 ORTHO05D014327 1.9e-06 55.8 90 36.7
CARHR228930 Cardamine hirsuta HOM05D009869 ORTHO05D011947 1.9e-06 55.8 87 41.4


User provided reference genes

Program Settings