Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 6.4e-62 240.7 136 100.0
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 4.0e-48 194.9 134 83.6
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 2.1e-44 182.6 134 79.9
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 2.7e-44 182.2 134 81.3
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 7.9e-44 180.6 134 80.6
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 3.0e-43 178.7 133 80.5
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 2.8e-41 172.2 133 78.9
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 4.8e-41 171.4 135 77.8
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 3.1e-40 168.7 134 77.6
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 3.1e-40 168.7 136 76.5
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 3.4e-31 138.7 122 62.3
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 4.1e-24 115.2 112 56.2
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 6.9e-24 114.4 127 59.1
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 3.4e-23 112.1 101 51.5
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 3.4e-23 112.1 119 55.5
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 5.9e-23 111.3 114 56.1
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 5.9e-23 111.3 131 50.4
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 5.9e-23 111.3 115 43.5
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 7.6e-23 110.9 114 56.1
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 1.0e-22 110.5 101 49.5
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 1.7e-22 109.8 107 56.1
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 1.7e-22 109.8 101 45.5
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 5.0e-22 108.2 119 44.5
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 8.5e-22 107.5 107 48.6
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 8.5e-22 107.5 112 53.6
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 8.5e-22 107.5 130 40.8
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.4e-21 106.7 107 48.6
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 1.4e-21 106.7 107 48.6
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 1.9e-21 106.3 112 50.9
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 1.9e-21 106.3 112 56.2
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.9e-21 106.3 130 45.4
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 1.9e-21 106.3 103 58.3
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 2.5e-21 105.9 112 53.6
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 4.2e-21 105.1 100 46.0
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 4.2e-21 105.1 120 42.5
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 5.5e-21 104.8 100 58.0
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 1.2e-20 103.6 106 63.2
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.6e-20 103.2 123 50.4
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 2.1e-20 102.8 123 43.9
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 2.1e-20 102.8 110 51.8
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 3.6e-20 102.1 115 47.8
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 3.6e-20 102.1 102 47.1
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 3.6e-20 102.1 144 38.2
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 6.1e-20 101.3 113 41.6
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 6.1e-20 101.3 110 59.1
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 6.1e-20 101.3 113 46.9
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 6.1e-20 101.3 113 60.2
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 7.9e-20 100.9 113 50.4
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 1.0e-19 100.5 122 47.5
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 1.8e-19 99.8 108 52.8
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 1.8e-19 99.8 109 62.4
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 2.3e-19 99.4 123 46.3
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 2.3e-19 99.4 113 46.0
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 2.3e-19 99.4 112 50.9
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 3.0e-19 99.0 108 63.0
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 3.0e-19 99.0 100 54.0
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 3.9e-19 98.6 113 49.6
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 5.1e-19 98.2 126 47.6
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 6.7e-19 97.8 126 46.8
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.9e-18 96.3 123 40.7
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 1.9e-18 96.3 109 53.2
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.5e-18 95.9 157 33.8
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 7.4e-18 94.4 117 47.9
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 7.4e-18 94.4 129 41.9
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 4.8e-17 91.7 117 47.0
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 6.3e-17 91.3 102 54.9
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 1.1e-16 90.5 131 38.9
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 4.1e-16 88.6 104 40.4
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 3.4e-15 85.5 122 37.7
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 5.9e-15 84.7 109 50.5
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 3.8e-14 82.0 81 45.7
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 5.0e-14 81.6 91 51.6
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.4e-13 80.1 125 42.4
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 2.5e-13 79.3 117 43.6
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 4.2e-13 78.6 104 35.6
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 5.5e-13 78.2 64 71.9
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 9.4e-13 77.4 75 60.0
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 9.4e-13 77.4 131 50.4
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 2.1e-12 76.3 93 60.2
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 8.8e-11 70.9 82 39.0
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 2.6e-10 69.3 91 49.5
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 1.7e-09 66.6 93 43.0
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.1e-08 63.9 61 47.5
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 7.0e-08 61.2 109 45.9
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 1.0e-06 57.4 52 48.1
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 5.0e-06 55.1 66 37.9


User provided reference genes

Program Settings