Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1689 Capsella rubella HOM05D009524 ORTHO05D001207 2.7e-92 342.0 177 100.0
Carub.0003s1690 Capsella rubella HOM05D009524 ORTHO05D001207 4.1e-53 211.8 173 65.3
AL3G30140 Arabidopsis lyrata HOM05D009524 ORTHO05D001207 1.9e-45 186.4 181 56.4
AT3G17152 Arabidopsis thaliana HOM05D009524 ORTHO05D001207 8.7e-43 177.6 181 55.8
CARHR092420 Cardamine hirsuta HOM05D009524 ORTHO05D001207 7.6e-39 164.5 180 51.7
Thhalv10022234m.g Eutrema salsugineum HOM05D009524 ORTHO05D001207 4.2e-37 158.7 187 49.2
BcaB04g20861 Brassica carinata HOM05D009524 ORTHO05D001207 7.9e-36 154.5 174 52.9
BolC3t13318H Brassica oleracea HOM05D009524 ORTHO05D001207 6.6e-35 151.4 174 52.3
CARHR092410 Cardamine hirsuta HOM05D009524 ORTHO05D001207 8.7e-35 151.0 179 49.7
BcaC09g48672 Brassica carinata HOM05D009524 ORTHO05D001207 3.3e-34 149.1 174 51.7
C01p47080 Brassica napus HOM05D009524 ORTHO05D001207 3.3e-34 149.1 174 51.7
BcaB04g20860 Brassica carinata HOM05D009524 ORTHO05D001207 4.3e-34 148.7 173 50.9
BraA01t03775Z Brassica rapa HOM05D009524 ORTHO05D001207 5.6e-34 148.3 174 51.1
A01p37140 Brassica napus HOM05D009524 ORTHO05D001207 9.6e-34 147.5 174 51.1
C03p08210 Brassica napus HOM05D009524 ORTHO05D001207 1.6e-33 146.7 174 50.6
BolC1t04674H Brassica oleracea HOM05D009524 ORTHO05D001207 1.6e-33 146.7 174 51.1
A03p07210 Brassica napus HOM05D009524 ORTHO05D001207 1.1e-32 144.1 174 50.0
BraA03t10043Z Brassica rapa HOM05D009524 ORTHO05D001207 1.1e-32 144.1 174 50.0
BcaB04g20858 Brassica carinata HOM05D009524 ORTHO05D001207 1.4e-32 143.7 174 50.0
CARHR092400 Cardamine hirsuta HOM05D009524 ORTHO05D001207 2.6e-31 139.4 180 45.6
Thhalv10022317m.g Eutrema salsugineum HOM05D009524 ORTHO05D001207 4.6e-28 128.6 184 42.4
AT3G17150 Arabidopsis thaliana HOM05D009524 ORTHO05D001207 2.5e-26 122.9 180 43.3
AL3G30130 Arabidopsis lyrata HOM05D009524 ORTHO05D001207 1.3e-22 110.5 155 43.2
THA.LOC104802609 Tarenaya hassleriana HOM05D009524 ORTHO05D001207 2.1e-20 103.2 175 34.9
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 1.8e-19 100.1 119 47.1
Aa31LG8G4150 Aethionema arabicum HOM05D009524 ORTHO05D001207 3.1e-16 89.4 118 41.5
Gohir.D01G023568 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.6e-15 86.3 172 31.4
Gorai.002G031200 Gossypium raimondii HOM05D001578 ORTHO05D001207 2.6e-15 86.3 172 31.4
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 3.0e-11 72.8 172 30.2
PGR031G2424 Punica granatum HOM05D001578 ORTHO05D001207 2.2e-09 66.6 165 28.5
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 3.7e-09 65.9 146 29.5
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 5.3e-08 62.0 135 29.6
Thecc.04G304700 Theobroma cacao HOM05D001578 ORTHO05D001207 6.9e-08 61.6 167 23.4
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 2.6e-07 59.7 148 29.1
COL.COLO4_34581 Corchorus olitorius HOM05D001578 ORTHO05D001207 3.4e-07 59.3 167 25.1
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 4.5e-07 58.9 150 29.3
CSS0020686 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 5.9e-07 58.5 156 30.8
CSS0012414 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 7.7e-07 58.2 156 30.8
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 7.7e-07 58.2 134 29.9
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 7.7e-07 58.2 148 27.0
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 1.7e-06 57.0 171 28.7
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 2.2e-06 56.6 167 24.0
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 2.2e-06 56.6 167 24.0
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 2.2e-06 56.6 146 26.7
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 3.8e-06 55.8 138 29.0
Aqoxy7G03403 Aquilegia oxysepala HOM05D059304 ORTHO05D005233 5.0e-06 55.5 117 30.8
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 6.5e-06 55.1 178 21.9
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 6.5e-06 55.1 88 31.8


User provided reference genes

Program Settings