Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 5.1e-125 451.1 221 100.0
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.3e-115 419.9 220 91.8
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 4.8e-115 417.9 220 92.3
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 8.1e-115 417.2 221 91.0
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.1e-114 416.8 219 91.3
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 4.4e-113 411.4 214 91.6
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.2e-110 403.3 218 89.0
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 2.7e-110 402.1 218 89.0
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 2.3e-109 399.1 219 87.7
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 2.3e-109 399.1 219 87.7
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 2.3e-109 399.1 219 87.7
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 5.6e-108 394.4 219 86.3
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 6.0e-102 374.4 219 83.1
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 1.1e-98 363.6 219 82.2
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 6.3e-83 311.2 219 66.7
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 8.2e-83 310.8 221 65.6
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.4e-82 310.1 219 66.2
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 1.8e-82 309.7 219 66.7
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 9.0e-82 307.4 219 65.8
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.2e-81 307.0 219 65.3
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 1.5e-81 306.6 221 66.5
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.5e-81 306.6 213 65.7
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.0e-81 306.2 213 64.3
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 3.4e-81 305.4 213 65.3
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 4.5e-81 305.1 213 65.3
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.0e-80 303.9 218 65.1
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 1.0e-80 303.9 213 65.7
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 1.0e-80 303.9 221 65.6
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 1.3e-80 303.5 216 65.7
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.9e-80 302.4 213 64.8
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 5.0e-80 301.6 218 65.1
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 8.5e-80 300.8 217 64.1
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 8.5e-80 300.8 213 65.7
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.2e-79 298.5 213 63.4
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 4.2e-79 298.5 217 61.8
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 5.5e-79 298.1 211 64.9
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 9.4e-79 297.4 212 65.1
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.6e-78 296.6 213 65.7
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.6e-78 296.6 220 61.4
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 2.1e-78 296.2 175 78.9
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 3.6e-78 295.4 220 64.5
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 3.6e-78 295.4 211 64.5
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 3.6e-78 295.4 212 64.2
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.0e-77 293.9 219 62.6
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.0e-77 293.9 218 62.4
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.3e-77 292.7 213 63.4
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 2.3e-77 292.7 211 65.4
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 5.1e-77 291.6 227 63.9
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 6.7e-77 291.2 217 62.2
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 6.7e-77 291.2 215 60.9
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 8.8e-77 290.8 221 61.5
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 1.1e-76 290.4 222 64.0
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 1.1e-76 290.4 217 61.8
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 1.5e-76 290.0 217 61.8
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 1.5e-76 290.0 220 59.5
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 3.3e-76 288.9 211 62.6
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 3.3e-76 288.9 218 61.0
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 5.7e-76 288.1 213 61.5
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 5.7e-76 288.1 222 61.3
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 5.7e-76 288.1 223 62.8
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 5.7e-76 288.1 211 61.6
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 7.4e-76 287.7 213 60.6
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 9.7e-76 287.3 211 62.1
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 9.7e-76 287.3 215 62.3
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 8.2e-75 284.3 212 61.3
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 8.2e-75 284.3 211 64.0
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.1e-74 283.9 210 62.4
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 1.1e-74 283.9 213 61.5
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 3.1e-74 282.3 203 65.0
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 5.3e-74 281.6 223 60.1
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 9.1e-74 280.8 183 71.0
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 1.2e-73 280.4 210 61.4
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 1.5e-73 280.0 217 59.0
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 2.0e-73 279.6 187 77.0
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.6e-73 279.3 213 62.9
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 4.5e-73 278.5 210 61.0
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 4.5e-73 278.5 212 60.4
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 5.9e-73 278.1 213 60.6
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.3e-72 276.9 214 58.9
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 1.3e-72 276.9 217 59.4
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 1.7e-72 276.6 214 58.4
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 3.8e-72 275.4 212 59.9
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.9e-71 273.1 212 59.9
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 2.5e-71 272.7 214 58.4
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 4.2e-71 271.9 215 59.1
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 5.5e-71 271.6 211 56.9
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 7.2e-71 271.2 208 57.7
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 4.7e-70 268.5 274 47.8
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 1.4e-69 266.9 213 58.7
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 1.8e-69 266.5 208 57.2
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 5.2e-69 265.0 213 58.2
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 5.7e-68 261.5 211 57.3
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 3.7e-67 258.8 213 56.8
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 7.0e-66 254.6 211 56.4
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 9.4e-63 244.2 175 64.0
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 8.0e-62 241.1 218 53.2
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 6.7e-61 238.0 210 51.9
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 7.5e-60 234.6 210 54.8
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.7e-59 233.4 175 61.7
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.4e-58 230.3 249 46.6
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 7.0e-58 228.0 181 59.7
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 1.6e-57 226.9 215 50.2
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 5.9e-57 224.9 174 60.9
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 7.2e-55 218.0 216 48.6
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 2.6e-52 209.5 216 46.8
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.2e-51 206.5 153 64.1
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 4.8e-51 205.3 208 47.6
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.8e-50 203.4 213 46.9
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 4.1e-50 202.2 215 41.9
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 5.4e-50 201.8 209 47.8
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 9.1e-50 201.1 214 43.9
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 1.2e-46 190.7 157 56.1
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.2e-46 190.7 217 41.9
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 8.8e-45 184.5 161 53.4
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 2.3e-40 169.9 136 57.4
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 2.8e-38 162.9 164 49.4
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.2e-36 157.5 113 65.5
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.8e-29 133.7 217 32.3
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 4.0e-29 132.5 87 69.0
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 1.0e-24 117.9 112 52.7
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 3.9e-24 115.9 156 46.2
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 1.1e-18 97.8 96 46.9
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 1.6e-17 94.0 221 29.4
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 3.1e-13 79.7 97 44.3
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 6.8e-13 78.6 54 63.0
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 2.6e-12 76.6 102 34.3
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 2.4e-10 70.1 43 67.4


User provided reference genes

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