Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 8.1e-94 347.1 174 100.0
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 6.4e-83 310.8 170 92.9
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 8.4e-83 310.5 170 91.2
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 3.9e-80 301.6 170 89.4
C05p50310 Brassica napus HOM05D005658 ORTHO05D006989 5.1e-80 301.2 169 87.6
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 8.7e-80 300.4 169 89.3
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 8.7e-80 300.4 170 89.4
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 1.1e-79 300.1 169 87.0
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 1.9e-79 299.3 169 87.0
BraA05t22156Z Brassica rapa HOM05D005658 ORTHO05D006989 8.2e-78 293.9 177 83.6
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 5.3e-77 291.2 179 82.1
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 6.7e-72 274.2 171 80.1
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 2.2e-67 259.2 169 79.3
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 6.5e-67 257.7 171 73.7
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 1.1e-66 256.9 169 74.6
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 4.2e-66 255.0 171 71.9
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 7.2e-66 254.2 171 73.1
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 9.3e-66 253.8 169 73.4
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 1.2e-65 253.4 169 73.4
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 1.2e-65 253.4 169 73.4
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 2.1e-65 252.7 167 74.9
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 2.7e-65 252.3 171 71.9
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 3.6e-65 251.9 167 73.7
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 3.6e-65 251.9 169 73.4
Haze_16346 Corylus avellana HOM05D005658 ORTHO05D006989 1.3e-64 250.0 169 69.8
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 1.8e-64 249.6 167 72.5
Dinv38010 Davidia involucrata HOM05D005658 ORTHO05D006989 2.3e-64 249.2 171 70.8
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 3.0e-64 248.8 169 72.2
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 3.0e-64 248.8 166 72.9
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 3.0e-64 248.8 169 71.0
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 3.9e-64 248.4 169 72.8
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 3.9e-64 248.4 171 71.3
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 6.7e-64 247.7 167 73.1
Psat5g078360 Pisum sativum HOM05D005658 ORTHO05D006989 6.7e-64 247.7 169 72.8
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 8.7e-64 247.3 169 71.6
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 1.1e-63 246.9 172 70.3
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 2.5e-63 245.7 171 70.2
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea HOM05D005658 ORTHO05D006989 2.5e-63 245.7 167 72.5
Duzib235G1329 Durio zibethinus HOM05D005658 ORTHO05D006989 4.3e-63 245.0 169 71.0
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 4.3e-63 245.0 171 71.3
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 5.7e-63 244.6 167 72.5
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 1.3e-62 243.4 167 71.9
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 1.3e-62 243.4 167 71.9
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 1.7e-62 243.0 167 71.9
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.7e-62 243.0 170 68.8
MBI04_g04855_MAGBIO Magnolia biondii HOM05D005658 ORTHO05D006989 3.7e-62 241.9 167 71.9
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 4.8e-62 241.5 167 70.7
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 4.8e-62 241.5 171 69.6
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 8.2e-62 240.7 167 68.9
FAN05G4480 Fragaria x ananassa HOM05D005658 ORTHO05D006989 8.2e-62 240.7 167 71.3
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 1.1e-61 240.4 171 70.2
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 1.1e-61 240.4 169 70.4
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 1.1e-61 240.4 167 71.9
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.4e-61 240.0 169 71.0
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 1.8e-61 239.6 169 71.6
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 2.4e-61 239.2 167 71.9
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 2.4e-61 239.2 169 70.4
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 3.1e-61 238.8 169 69.8
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 4.1e-61 238.4 171 70.8
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 6.9e-61 237.7 169 69.8
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 6.9e-61 237.7 169 69.8
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 1.5e-60 236.5 167 70.1
PSO210G2136 Papaver somniferum HOM05D005658 ORTHO05D006989 1.5e-60 236.5 165 69.7
Phvul.010G147800 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 2.6e-60 235.7 167 68.3
VMungo0331G0597 Vigna mungo HOM05D005658 ORTHO05D006989 2.6e-60 235.7 167 66.5
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 3.4e-60 235.3 164 69.5
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 4.5e-60 235.0 167 70.1
Aqoxy7G01547 Aquilegia oxysepala HOM05D005658 ORTHO05D006989 5.9e-60 234.6 167 68.3
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 5.9e-60 234.6 166 68.1
Migut.D01014 Erythranthe guttata HOM05D005658 ORTHO05D006989 7.7e-60 234.2 170 70.0
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 7.7e-60 234.2 169 69.8
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.3e-59 233.4 171 64.3
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 2.9e-59 232.3 168 70.2
HanXRQChr10g0313501 Helianthus annuus HOM05D005658 ORTHO05D006989 5.0e-59 231.5 167 68.9
DCAR_016205 Daucus carota HOM05D005658 ORTHO05D006989 1.4e-58 229.9 171 67.8
Nitab4.5_0001968g0140 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.4e-58 229.9 169 69.2
Sc12g0009500 Simmondsia chinensis HOM05D005658 ORTHO05D006989 1.4e-58 229.9 167 67.7
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 3.2e-58 228.8 167 68.9
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 4.2e-58 228.4 166 65.7
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 4.2e-58 228.4 171 66.1
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 5.5e-58 228.0 165 70.3
PSO210G3060 Papaver somniferum HOM05D005658 ORTHO05D006989 1.6e-57 226.5 165 69.1
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 6.1e-57 224.6 169 66.9
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 1.4e-56 223.4 147 76.2
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 3.0e-56 222.2 164 64.6
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 3.9e-56 221.9 168 63.7
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 3.9e-56 221.9 167 68.3
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 8.8e-56 220.7 167 64.7
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 8.8e-56 220.7 147 74.8
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 1.5e-55 219.9 157 70.7
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 2.0e-55 219.5 165 69.1
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 2.0e-55 219.5 166 70.5
SEGI_12338 Sequoiadendron giganteum HOM05D005658 ORTHO05D006989 4.4e-55 218.4 171 62.6
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 5.7e-55 218.0 147 73.5
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 2.8e-54 215.7 147 72.8
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 4.8e-54 214.9 158 67.1
Lsat_1_v5_gn_5_131001 Lactuca sativa HOM05D000012 ORTHO05D000804 3.1e-53 212.2 150 70.0
COL.COLO4_30457 Corchorus olitorius HOM05D005658 ORTHO05D006989 4.1e-53 211.8 145 73.8
Os02g0276200 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 4.1e-53 211.8 162 66.0
ClCG09G001890 Citrullus lanatus HOM05D005658 ORTHO05D006989 6.9e-53 211.1 169 60.4
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 6.9e-53 211.1 147 70.7
Psat7g255080 Pisum sativum HOM05D005658 ORTHO05D006989 1.5e-52 209.9 140 73.6
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 1.5e-52 209.9 171 62.0
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 5.9e-52 208.0 147 70.7
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 7.7e-52 207.6 167 60.5
TPR.G40810 Trifolium pratense HOM05D005658 ORTHO05D006989 7.7e-52 207.6 140 72.9
COL.COLO4_18473 Corchorus olitorius HOM05D005658 ORTHO05D006989 2.9e-51 205.7 168 64.3
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 8.5e-51 204.1 147 69.4
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 1.1e-50 203.8 147 68.7
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 1.4e-50 203.4 170 57.1
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 5.5e-50 201.4 150 68.0
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 8.0e-49 197.6 167 61.1
AUR62011683 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.0e-48 197.2 145 68.3
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 1.8e-48 196.4 168 56.5
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 3.0e-48 195.7 145 69.7
MELO3C027085.2 Cucumis melo HOM05D005658 ORTHO05D006989 1.1e-47 193.7 169 59.2
Nitab4.5_0003039g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 7.4e-47 191.0 147 66.0
Peaxi162Scf00015g00132 Petunia axillaris HOM05D005658 ORTHO05D006989 1.3e-46 190.3 165 61.8
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 1.1e-45 187.2 169 58.0
AUR62016508 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.6e-44 183.3 164 60.4
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 2.0e-44 183.0 166 54.2
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 4.5e-44 181.8 145 63.4
Haze_16345 Corylus avellana HOM05D003600 ORTHO05D004129 7.7e-44 181.0 120 75.0
Psat5g078240 Pisum sativum HOM05D005658 ORTHO05D006989 5.5e-42 174.9 169 53.8
Atru.chr1.3413 Acer truncatum HOM05D005658 ORTHO05D006989 1.0e-40 170.6 116 71.6
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 1.7e-38 163.3 169 49.1
Peaxi162Scf00015g00131 Petunia axillaris HOM05D005658 ORTHO05D006989 2.2e-35 152.9 110 70.0
AUR62011684 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.5e-34 150.2 116 66.4
Cpa.g.sc1241.2 Carica papaya HOM05D005658 ORTHO05D006989 1.9e-34 149.8 110 65.5
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 4.4e-31 138.7 165 44.2
Sed0018991 Sechium edule HOM05D005658 ORTHO05D006989 1.4e-29 133.7 106 61.3
Glyma.08G203700 Glycine max HOM05D005658 ORTHO05D006989 1.8e-29 133.3 95 68.4
Manes.11G037100 Manihot esculenta HOM05D005658 ORTHO05D006989 2.0e-23 113.2 147 46.9
CAN.G214.3 Capsicum annuum HOM05D005658 ORTHO05D006989 3.8e-19 99.0 137 44.5
QL02p037511 Quercus lobata HOM05D005658 ORTHO05D006989 6.0e-12 75.1 62 61.3
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 3.4e-07 59.3 136 28.7
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 4.4e-07 58.9 148 31.1
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 4.4e-07 58.9 156 31.4
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 5.8e-07 58.5 149 28.9
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 7.5e-07 58.2 148 27.7
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 1.7e-06 57.0 146 29.5
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 2.9e-06 56.2 148 26.4
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 3.7e-06 55.8 95 35.8
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 3.7e-06 55.8 148 29.1
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 4.9e-06 55.5 83 32.5
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 4.9e-06 55.5 146 29.5
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 8.3e-06 54.7 148 28.4
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 8.3e-06 54.7 148 29.1


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