Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1354 Capsella rubella HOM05D009071 ORTHO05D011247 6.8e-20 101.7 52 100.0
AL3G26160 Arabidopsis lyrata HOM05D009071 ORTHO05D011247 4.4e-19 99.0 52 96.2
A03p38590 Brassica napus HOM05D009071 ORTHO05D011247 6.4e-18 95.1 51 92.2
Sp3g12210 Schrenkiella parvula HOM05D009071 ORTHO05D011247 1.4e-17 94.0 51 90.2
CARHR088780 Cardamine hirsuta HOM05D009071 ORTHO05D011247 1.9e-17 93.6 51 92.2
BraA03t13006Z Brassica rapa HOM05D009071 ORTHO05D011247 2.4e-17 93.2 51 90.2
BcaC01g03961 Brassica carinata HOM05D009071 ORTHO05D011247 7.8e-16 88.2 48 89.6
C03p46700 Brassica napus HOM05D009071 ORTHO05D011247 7.8e-16 88.2 48 89.6
BolC3t16935H Brassica oleracea HOM05D009071 ORTHO05D011247 7.8e-16 88.2 48 89.6
Aa31LG8G1160 Aethionema arabicum HOM05D009071 ORTHO05D011247 5.1e-15 85.5 48 85.4
A05p35450 Brassica napus HOM05D009071 ORTHO05D011247 7.3e-14 81.6 52 82.7
BraA05t22355Z Brassica rapa HOM05D009071 ORTHO05D011247 7.3e-14 81.6 52 82.7
BolC5t34044H Brassica oleracea HOM05D009071 ORTHO05D011247 9.5e-14 81.3 52 82.7
BcaC05g29137 Brassica carinata HOM05D009071 ORTHO05D011247 1.6e-13 80.5 52 82.7
C05p53760 Brassica napus HOM05D009071 ORTHO05D011247 1.6e-13 80.5 52 82.7
BcaB04g18815 Brassica carinata HOM05D009071 ORTHO05D011247 4.7e-13 79.0 47 87.2
BcaB06g25415 Brassica carinata HOM05D009071 ORTHO05D011247 3.1e-12 76.3 49 81.6
THA.LOC104810363 Tarenaya hassleriana HOM05D009071 ORTHO05D011247 1.1e-09 67.8 48 66.7
Thhalv10012303m.g Eutrema salsugineum HOM05D009071 ORTHO05D011247 4.6e-08 62.4 48 64.6
BcaB04g17014 Brassica carinata HOM05D009071 ORTHO05D011247 1.1e-06 57.8 46 58.7
ClCG07G014060 Citrullus lanatus HOM05D008345 ORTHO05D010179 1.5e-06 57.4 46 60.9
MELO3C025805.2 Cucumis melo HOM05D008345 ORTHO05D010179 1.5e-06 57.4 46 60.9
Aa31LG4G2900 Aethionema arabicum HOM05D013126 ORTHO05D015256 1.9e-06 57.0 40 70.0
Carub.0001s4345 Capsella rubella HOM05D009071 ORTHO05D011247 1.9e-06 57.0 46 58.7
CsaV3_3G031340 Cucumis sativus L. HOM05D008345 ORTHO05D010179 1.9e-06 57.0 46 60.9
AT1G54215 Arabidopsis thaliana HOM05D009071 ORTHO05D011247 3.3e-06 56.2 46 58.7
BcaC01g01447 Brassica carinata HOM05D009071 ORTHO05D011247 4.3e-06 55.8 45 57.8
BcaC01g01448 Brassica carinata HOM05D009071 ORTHO05D011247 4.3e-06 55.8 45 57.8
A08p01090 Brassica napus HOM05D009071 ORTHO05D011247 4.3e-06 55.8 45 57.8
C03p92110 Brassica napus HOM05D009071 ORTHO05D011247 4.3e-06 55.8 45 57.8
BraA08t32165Z Brassica rapa HOM05D009071 ORTHO05D011247 4.3e-06 55.8 45 57.8
Carub.0002s1944 Capsella rubella HOM05D013126 ORTHO05D015256 4.3e-06 55.8 39 71.8
CARHR065530 Cardamine hirsuta HOM05D013126 ORTHO05D015256 5.6e-06 55.5 37 78.4
BcaC01g01446 Brassica carinata HOM05D009071 ORTHO05D011247 7.3e-06 55.1 43 60.5


User provided reference genes

Program Settings