Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1297 Capsella rubella HOM05D004137 ORTHO05D004804 1.3e-58 229.6 118 100.0
AL3G25410 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 4.7e-29 131.3 124 65.3
AT3G13500 Arabidopsis thaliana HOM05D004137 ORTHO05D004804 6.4e-26 120.9 119 64.7
Thhalv10022151m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 3.7e-13 78.6 87 56.3
CARHR088170 Cardamine hirsuta HOM05D004137 ORTHO05D004804 3.1e-12 75.5 64 60.9
CARHR045030 Cardamine hirsuta HOM05D004137 ORTHO05D004804 9.0e-12 73.9 125 45.6
A05p35990 Brassica napus HOM05D004137 ORTHO05D004804 3.8e-10 68.6 63 55.6
BraA05t22405Z Brassica rapa HOM05D004137 ORTHO05D004804 3.8e-10 68.6 63 55.6
BcaC08g43620 Brassica carinata HOM05D004137 ORTHO05D004804 8.4e-10 67.4 125 44.8
A06p00220 Brassica napus HOM05D004137 ORTHO05D004804 7.1e-09 64.3 109 44.0
Aa31LG8G700 Aethionema arabicum HOM05D004137 ORTHO05D004804 2.1e-08 62.8 118 42.4
AL1G63420 Arabidopsis lyrata HOM05D004137 ORTHO05D004804 2.7e-08 62.4 134 41.8
C06p10340 Brassica napus HOM05D004137 ORTHO05D004804 3.5e-08 62.0 126 42.9
BolC6t36110H Brassica oleracea HOM05D004137 ORTHO05D004804 3.5e-08 62.0 126 42.9
BcaB04g16959 Brassica carinata HOM05D004137 ORTHO05D004804 7.9e-08 60.8 75 49.3
BraA06t23238Z Brassica rapa HOM05D004137 ORTHO05D004804 7.9e-08 60.8 126 41.3
C03p92680 Brassica napus HOM05D004137 ORTHO05D004804 6.7e-07 57.8 71 47.9
THA.LOC104810322 Tarenaya hassleriana HOM05D004137 ORTHO05D004804 8.7e-07 57.4 110 42.7
BcaC01g01518 Brassica carinata HOM05D004137 ORTHO05D004804 1.1e-06 57.0 71 47.9
Sp1g41045 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.1e-06 57.0 137 40.9
BolC3t21580H Brassica oleracea HOM05D004137 ORTHO05D004804 1.5e-06 56.6 71 47.9
Thhalv10011858m.g Eutrema salsugineum HOM05D004137 ORTHO05D004804 1.5e-06 56.6 133 40.6
Sp3g11710 Schrenkiella parvula HOM05D004137 ORTHO05D004804 1.9e-06 56.2 56 55.4
Atru.chr3.2107 Acer truncatum HOM05D004137 ORTHO05D004804 5.6e-06 54.7 66 48.5


User provided reference genes

Program Settings