Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1282 Capsella rubella HOM05D001646 ORTHO05D001572 7.2e-90 334.0 177 100.0
Carub.0001s0837 Capsella rubella HOM05D001646 ORTHO05D001572 1.0e-72 276.9 178 84.8
AL1G19480 Arabidopsis lyrata HOM05D001646 ORTHO05D001572 3.7e-70 268.5 178 82.0
AT1G09040 Arabidopsis thaliana HOM05D001646 ORTHO05D001572 1.1e-69 266.9 178 83.1
AL1G19490 Arabidopsis lyrata HOM05D001646 ORTHO05D001572 1.6e-68 263.1 178 80.3
AT1G09050 Arabidopsis thaliana HOM05D001646 ORTHO05D001572 3.7e-62 241.9 178 77.5
CARHR008940 Cardamine hirsuta HOM05D001646 ORTHO05D001572 2.4e-53 212.6 182 69.2
Sp1g07650 Schrenkiella parvula HOM05D001646 ORTHO05D001572 8.1e-49 197.6 182 68.1
Thhalv10006718m.g Eutrema salsugineum HOM05D001646 ORTHO05D001572 2.2e-46 189.5 183 65.0
BcaC07g38470 Brassica carinata HOM05D001646 ORTHO05D001572 9.0e-40 167.5 180 62.2
BolC8t48882H Brassica oleracea HOM05D001646 ORTHO05D001572 9.0e-40 167.5 180 61.7
C08p12420 Brassica napus HOM05D001646 ORTHO05D001572 2.0e-39 166.4 180 61.7
BcaB07g34123 Brassica carinata HOM05D001646 ORTHO05D001572 1.2e-36 157.1 183 59.6
A08p34840 Brassica napus HOM05D001646 ORTHO05D001572 3.0e-35 152.5 180 58.3
BraA08t35395Z Brassica rapa HOM05D001646 ORTHO05D001572 6.6e-35 151.4 180 57.8
Carub.0313s0001 Capsella rubella HOM05D001646 ORTHO05D001572 3.8e-30 135.6 72 100.0
BcaC05g24759 Brassica carinata HOM05D001646 ORTHO05D001572 4.9e-30 135.2 156 60.3
C05p07090 Brassica napus HOM05D001646 ORTHO05D001572 4.9e-30 135.2 156 60.3
BolC5t29464H Brassica oleracea HOM05D001646 ORTHO05D001572 4.9e-30 135.2 156 60.3
AL1G65720 Arabidopsis lyrata HOM05D001646 ORTHO05D001572 6.4e-30 134.8 183 51.4
AT1G55050 Arabidopsis thaliana HOM05D001646 ORTHO05D001572 7.9e-28 127.9 181 50.8
CARHR289740 Cardamine hirsuta HOM05D001646 ORTHO05D001572 1.0e-27 127.5 181 50.3
BcaC05g24754 Brassica carinata HOM05D001646 ORTHO05D001572 8.7e-27 124.4 160 60.0
Aa31sc588G10 Aethionema arabicum HOM05D001646 ORTHO05D001572 1.1e-24 117.5 185 47.6
A06p05900 Brassica napus HOM05D001646 ORTHO05D001572 2.4e-24 116.3 157 54.8
A01p27260 Brassica napus HOM05D001646 ORTHO05D001572 3.4e-23 112.5 174 45.4
BraA01t02864Z Brassica rapa HOM05D001646 ORTHO05D001572 3.4e-23 112.5 174 45.4
THA.LOC104823728 Tarenaya hassleriana HOM05D001646 ORTHO05D001572 3.4e-23 112.5 143 53.8
BraA06t23797Z Brassica rapa HOM05D001646 ORTHO05D001572 4.5e-23 112.1 157 54.1
BcaB04g20153 Brassica carinata HOM05D001646 ORTHO05D001572 7.6e-23 111.3 175 46.9
A09p19210 Brassica napus HOM05D001646 ORTHO05D001572 1.3e-22 110.5 184 45.7
BcaC04g22038 Brassica carinata HOM05D001646 ORTHO05D001572 2.9e-22 109.4 187 44.4
C09p24220 Brassica napus HOM05D001646 ORTHO05D001572 2.9e-22 109.4 187 44.4
BolC9t55339H Brassica oleracea HOM05D001646 ORTHO05D001572 2.9e-22 109.4 187 44.4
BraA09t37539Z Brassica rapa HOM05D001646 ORTHO05D001572 3.8e-22 109.0 184 44.6
Thhalv10024094m.g Eutrema salsugineum HOM05D001646 ORTHO05D001572 4.9e-22 108.6 161 50.3
BcaC09g49575 Brassica carinata HOM05D001646 ORTHO05D001572 8.4e-22 107.8 174 43.7
C01p35050 Brassica napus HOM05D001646 ORTHO05D001572 8.4e-22 107.8 174 43.7
Sp2g06750 Schrenkiella parvula HOM05D001646 ORTHO05D001572 2.7e-20 102.8 181 43.6
BcaB07g31113 Brassica carinata HOM05D001646 ORTHO05D001572 1.3e-17 94.0 183 38.8
BcaB07g31112 Brassica carinata HOM05D001646 ORTHO05D001572 1.4e-16 90.5 182 37.9
BraA09t41905Z Brassica rapa HOM05D001646 ORTHO05D001572 5.7e-10 68.6 68 58.8
A09p65610 Brassica napus HOM05D001646 ORTHO05D001572 4.8e-09 65.5 68 57.4
C08p49680 Brassica napus HOM05D001646 ORTHO05D001572 8.2e-09 64.7 96 47.9


User provided reference genes

Program Settings