Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 3.6e-191 671.4 338 100.0
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 8.5e-140 500.7 337 78.6
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 1.2e-136 490.3 391 67.8
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 4.0e-129 465.3 388 66.2
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 1.2e-128 463.8 395 64.6
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 4.4e-128 461.8 367 68.4
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 4.0e-121 438.7 334 71.0
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 5.0e-116 421.8 387 61.5
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.4e-110 403.7 389 58.9
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 5.4e-110 401.7 389 58.6
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 2.7e-109 399.4 381 60.1
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.1e-107 394.0 375 60.3
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 4.7e-106 388.7 386 58.8
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 7.3e-83 311.6 361 50.1
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 5.1e-68 262.3 336 46.7
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 6.2e-66 255.4 330 43.6
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 1.8e-65 253.8 335 46.0
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 9.0e-65 251.5 336 44.3
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 2.2e-63 246.9 329 44.4
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.1e-62 244.6 333 42.3
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 1.1e-62 244.6 325 44.6
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 4.2e-62 242.7 333 42.0
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 7.1e-62 241.9 347 43.2
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 2.1e-61 240.4 328 42.1
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 2.1e-61 240.4 333 42.0
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 2.1e-61 240.4 335 42.1
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 4.6e-61 239.2 340 42.9
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 7.9e-61 238.4 350 41.1
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.3e-60 237.7 350 41.1
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 1.3e-60 237.7 330 42.1
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 2.8e-58 229.9 330 43.6
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.4e-57 226.9 334 41.0
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 3.1e-57 226.5 370 40.3
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 5.3e-57 225.7 325 42.2
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 1.2e-56 224.6 329 41.6
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.0e-56 223.8 333 41.1
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 1.0e-55 221.5 307 41.0
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.0e-55 221.5 333 40.8
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 1.0e-55 221.5 336 40.2
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 1.0e-55 221.5 378 36.8
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 1.3e-55 221.1 377 37.4
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 2.9e-55 219.9 378 38.9
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 5.0e-55 219.2 338 41.1
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 1.4e-54 217.6 336 41.7
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 2.5e-54 216.9 332 41.0
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 3.2e-54 216.5 322 41.0
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 3.2e-54 216.5 342 39.5
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 4.2e-54 216.1 171 61.4
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 5.5e-54 215.7 334 40.1
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 1.6e-53 214.2 337 36.8
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.6e-53 214.2 329 39.2
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.9e-53 211.8 347 38.6
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 3.0e-52 209.9 168 60.7
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 5.1e-52 209.1 356 38.2
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 1.1e-51 208.0 331 41.7
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.9e-51 207.2 168 60.7
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 9.7e-51 204.9 174 57.5
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 2.8e-50 203.4 330 37.6
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 3.7e-50 203.0 297 42.4
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 6.3e-50 202.2 191 52.9
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 1.1e-49 201.4 317 42.3
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 1.8e-49 200.7 335 40.3
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 2.4e-49 200.3 166 57.8
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 3.1e-49 199.9 171 55.0
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 5.3e-49 199.1 333 38.1
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 5.3e-49 199.1 330 36.1
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 9.1e-49 198.4 334 35.6
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 2.6e-48 196.8 348 38.5
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 3.4e-48 196.4 308 40.3
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 4.5e-48 196.1 200 48.0
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 4.5e-48 196.1 378 35.7
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 4.5e-48 196.1 326 38.3
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 4.5e-48 196.1 328 36.9
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 5.9e-48 195.7 330 36.4
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.7e-48 195.3 326 39.3
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 7.7e-48 195.3 334 38.6
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 5.0e-47 192.6 201 49.3
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 6.5e-47 192.2 176 55.1
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 6.5e-47 192.2 169 53.8
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 2.5e-46 190.3 246 43.5
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 9.4e-46 188.3 381 35.4
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 2.1e-45 187.2 245 41.6
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 4.6e-45 186.0 302 39.1
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 6.1e-45 185.7 255 40.8
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.0e-44 184.9 174 51.1
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 3.0e-44 183.3 237 46.4
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 9.7e-43 178.3 367 33.5
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.3e-42 177.9 213 45.1
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 4.8e-42 176.0 224 44.6
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 8.2e-42 175.3 120 69.2
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 1.4e-41 174.5 168 47.6
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 3.1e-41 173.3 201 47.8
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 6.9e-41 172.2 172 48.8
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.5e-40 171.0 173 48.6
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 2.6e-40 170.2 211 41.2
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 2.2e-39 167.2 311 33.8
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 1.6e-37 161.0 206 46.6
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 2.2e-31 140.6 169 45.6
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 2.1e-29 134.0 127 52.0
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 6.7e-28 129.0 184 37.5
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 8.8e-28 128.6 239 36.8
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 3.7e-26 123.2 127 47.2
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 5.9e-24 115.9 240 35.0
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 2.2e-23 114.0 306 29.1
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 1.6e-21 107.8 225 28.4
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 1.8e-17 94.4 90 46.7
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 9.5e-14 82.0 241 26.6
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 4.0e-12 76.6 69 43.5
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.0e-08 64.3 210 28.1


User provided reference genes

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