Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1134 Capsella rubella HOM05D004031 ORTHO05D011186 6.1e-28 126.7 62 100.0
Aa31LG3G5450 Aethionema arabicum HOM05D004031 ORTHO05D011186 2.0e-23 111.7 62 87.1
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 3.5e-23 110.9 58 89.7
Aa31LG3G5490 Aethionema arabicum HOM05D004031 ORTHO05D011186 5.9e-23 110.2 62 85.5
A03p37430 Brassica napus HOM05D004031 ORTHO05D011186 1.5e-21 105.5 58 87.9
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 1.9e-21 105.1 59 84.7
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 1.9e-21 105.1 59 84.7
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 1.6e-20 102.1 59 83.1
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 1.8e-19 98.6 60 83.3
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.3e-17 92.4 58 81.0
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.3e-17 92.4 58 81.0
GSVIVG01033459001 Vitis vinifera HOM05D004031 ORTHO05D011186 4.9e-17 90.5 62 74.2
Potri.016G060550 Populus trichocarpa HOM05D004031 ORTHO05D011186 1.1e-16 89.4 62 71.0
Manes.09G038400 Manihot esculenta HOM05D004031 ORTHO05D011186 1.9e-16 88.6 62 71.0
Thecc.05G176000 Theobroma cacao HOM05D004031 ORTHO05D011186 4.1e-16 87.4 62 71.0
MD12G1054200 Malus domestica HOM05D004031 ORTHO05D011186 1.2e-15 85.9 60 70.0
Duzib128G0401 Durio zibethinus HOM05D004031 ORTHO05D011186 3.5e-15 84.3 62 67.7
CDE05G3199 Ceratophyllum demersum HOM05D004031 ORTHO05D011186 6.0e-15 83.6 62 66.1
Gohir.D01G124600 Gossypium hirsutum HOM05D004031 ORTHO05D011186 7.8e-15 83.2 62 67.7
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 1.3e-14 82.4 60 68.3
Gohir.A01G137400 Gossypium hirsutum HOM05D004031 ORTHO05D011186 2.3e-14 81.6 62 66.1
Prupe.7G082600 Prunus persica HOM05D004031 ORTHO05D011186 2.3e-14 81.6 58 69.0
Sed0024429 Sechium edule HOM05D004031 ORTHO05D011186 2.3e-14 81.6 60 66.7
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 3.0e-14 81.3 56 73.2
RcHm_v2.0_Chr3g0479131 Rosa chinensis HOM05D004031 ORTHO05D011186 3.0e-14 81.3 62 64.5
Eucgr.K01857 Eucalyptus grandis HOM05D004031 ORTHO05D011186 5.0e-14 80.5 57 71.9
CiPaw.09G027900 Carya illinoinensis HOM05D004031 ORTHO05D011186 6.6e-14 80.1 62 64.5
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 8.6e-14 79.7 56 67.9
Phvul.001G144800 Phaseolus vulgaris HOM05D004031 ORTHO05D011186 1.9e-13 78.6 62 64.5
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 1.9e-13 78.6 57 68.4
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 2.5e-13 78.2 57 63.2
Migut.J01860 Erythranthe guttata HOM05D004031 ORTHO05D011186 2.5e-13 78.2 58 62.1
MELO3C009606.2 Cucumis melo HOM05D004031 ORTHO05D011186 3.3e-13 77.8 57 61.4
Nn7g35951 Nelumbo nucifera HOM05D004031 ORTHO05D011186 3.3e-13 77.8 62 62.9
Lalb_Chr15g0079141 Lupinus albus HOM05D004031 ORTHO05D011186 5.6e-13 77.0 62 62.9
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 1.2e-12 75.9 56 62.5
Glyma.19G150500 Glycine max HOM05D004031 ORTHO05D011186 1.2e-12 75.9 55 69.1
Nn7g36859 Nelumbo nucifera HOM05D004031 ORTHO05D011186 1.2e-12 75.9 62 64.5
Medtr7g093770 Medicago truncatula HOM05D004031 ORTHO05D011186 2.1e-12 75.1 60 61.7
Lj1g0020490 Lotus japonicus HOM05D004031 ORTHO05D011186 2.8e-12 74.7 57 63.2
CSS0013106 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D011186 4.7e-12 73.9 57 63.2
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 8.1e-12 73.2 56 66.1
Hma1.2p1_0124F.1_g058300 Hydrangea macrophylla HOM05D004031 ORTHO05D011186 1.4e-11 72.4 57 63.2
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 5.2e-11 70.5 58 63.8
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 5.2e-11 70.5 58 63.8
Glyma.03G147100 Glycine max HOM05D004031 ORTHO05D011186 2.6e-10 68.2 50 70.0
Cc06_g15560 Coffea canephora HOM05D004031 ORTHO05D011186 1.7e-09 65.5 57 59.6
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 2.4e-08 61.6 38 73.7
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 4.1e-08 60.8 54 50.0
SEGI_01182 Sequoiadendron giganteum HOM05D004031 ORTHO05D011186 2.7e-07 58.2 37 67.6
Hund06156 Selenicereus undatus HOM05D000159 ORTHO05D011186 6.0e-07 57.0 36 72.2
SHI31744 Sapria himalayana HOM05D004031 ORTHO05D011186 2.3e-06 55.1 41 58.5
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 5.1e-06 53.9 34 64.7


User provided reference genes

Program Settings