Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s0936 Capsella rubella HOM05D009742 ORTHO05D016608 9.7e-37 156.4 83 100.0
AL3G21530 Arabidopsis lyrata HOM05D009742 ORTHO05D016608 3.0e-30 134.8 82 82.9
AT3G10195 Arabidopsis thaliana HOM05D009742 ORTHO05D016608 2.6e-26 121.7 82 74.4
Thhalv10022345m.g Eutrema salsugineum HOM05D009742 ORTHO05D016608 3.8e-25 117.9 61 86.9
BolC3t16602H Brassica oleracea HOM05D009742 ORTHO05D016608 1.9e-24 115.5 61 82.0
CARHR084680 Cardamine hirsuta HOM05D009742 ORTHO05D016608 7.2e-24 113.6 61 85.2
BcaC01g04263 Brassica carinata HOM05D009742 ORTHO05D016608 9.4e-24 113.2 61 80.3
A03p35670 Brassica napus HOM05D009742 ORTHO05D016608 9.4e-24 113.2 61 80.3
BraA03t12742Z Brassica rapa HOM05D009742 ORTHO05D016608 9.4e-24 113.2 61 80.3
BcaB03g11570 Brassica carinata HOM05D009742 ORTHO05D016608 6.1e-23 110.5 61 77.0
A01p42000 Brassica napus HOM05D009742 ORTHO05D024001 1.0e-14 83.2 64 62.5
BraA01t04268Z Brassica rapa HOM05D009742 ORTHO05D024001 1.0e-14 83.2 64 62.5
BcaC09g48109 Brassica carinata HOM05D009742 ORTHO05D024001 1.4e-14 82.8 64 60.9
BolC1t05415H Brassica oleracea HOM05D009742 ORTHO05D024001 1.4e-14 82.8 64 60.9
BolC1t05417H Brassica oleracea HOM05D009742 ORTHO05D039915 1.8e-14 82.4 67 61.2
BcaB04g21224 Brassica carinata HOM05D009742 ORTHO05D024001 1.5e-13 79.3 85 52.9
BcaC09g48110 Brassica carinata HOM05D009742 ORTHO05D032499 3.1e-11 71.6 61 63.9
C03p43320 Brassica napus HOM05D009742 ORTHO05D097810 1.0e-09 66.6 64 54.7
A01p42010 Brassica napus HOM05D009742 ORTHO05D032499 3.8e-09 64.7 65 56.9
BraA01t04269Z Brassica rapa HOM05D009742 ORTHO05D032499 3.8e-09 64.7 65 56.9
BcaB04g21223 Brassica carinata HOM05D009742 ORTHO05D024321 7.2e-08 60.5 81 48.1
A01p41060 Brassica napus HOM05D009742 ORTHO05D024321 3.0e-06 55.1 66 47.0
BNapus_Darmor_BZH_scaffold_78p00650 Brassica napus HOM05D009742 ORTHO05D024321 3.0e-06 55.1 66 47.0


User provided reference genes

Program Settings