Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s0260 Capsella rubella HOM05D004645 ORTHO05D005693 1.8e-159 566.2 372 100.0
AL3G13140 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 3.4e-121 439.1 326 77.3
AT3G03460 Arabidopsis thaliana HOM05D004645 ORTHO05D005693 3.8e-117 425.6 326 80.7
Thhalv10020936m.g Eutrema salsugineum HOM05D004645 ORTHO05D005693 3.5e-102 375.9 344 73.5
Sp3g02460 Schrenkiella parvula HOM05D004645 ORTHO05D005693 5.2e-98 362.1 334 73.7
THA.LOC104820831 Tarenaya hassleriana HOM05D004645 ORTHO05D005693 7.0e-95 351.7 346 63.6
AT5G17510 Arabidopsis thaliana HOM05D004645 ORTHO05D005693 1.2e-94 350.9 343 66.2
Aa31LG11G12160 Aethionema arabicum HOM05D004645 ORTHO05D005693 3.9e-93 345.9 346 64.7
BolC9t58802H Brassica oleracea HOM05D004645 ORTHO05D005693 6.6e-93 345.1 342 64.6
BcaC04g18782 Brassica carinata HOM05D004645 ORTHO05D005693 8.6e-93 344.7 342 64.9
Carub.0006s1574 Capsella rubella HOM05D004645 ORTHO05D005693 1.5e-92 344.0 342 64.6
C09p59630 Brassica napus HOM05D004645 ORTHO05D005693 3.3e-92 342.8 342 64.3
BcaB08g36765 Brassica carinata HOM05D004645 ORTHO05D005693 5.6e-92 342.0 343 65.6
A10p21880 Brassica napus HOM05D004645 ORTHO05D005693 1.6e-91 340.5 343 65.6
BraA10t44247Z Brassica rapa HOM05D004645 ORTHO05D005693 1.6e-91 340.5 343 65.6
Sp6g26710 Schrenkiella parvula HOM05D004645 ORTHO05D005693 1.6e-91 340.5 350 64.0
AL6G28600 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 6.2e-91 338.6 343 64.1
THA.LOC104802906 Tarenaya hassleriana HOM05D004645 ORTHO05D005693 1.9e-87 327.0 343 56.6
Thhalv10013879m.g Eutrema salsugineum HOM05D004645 ORTHO05D005693 3.2e-87 326.2 334 66.2
CARHR195680 Cardamine hirsuta HOM05D004645 ORTHO05D005693 7.8e-86 321.6 338 64.5
BNapus_Darmor_BZH_scaffold_162p00170 Brassica napus HOM05D004645 ORTHO05D005693 3.9e-77 292.7 331 58.3
BolC1t05829H Brassica oleracea HOM05D004645 ORTHO05D005693 3.9e-77 292.7 331 58.3
A06p26400 Brassica napus HOM05D004645 ORTHO05D005693 6.9e-74 282.0 332 59.6
BNapus_Darmor_BZH_scaffold_78p00150 Brassica napus HOM05D004645 ORTHO05D005693 6.9e-74 282.0 332 59.6
BraA01t04578Z Brassica rapa HOM05D004645 ORTHO05D005693 2.0e-73 280.4 332 59.3
Gohir.D03G055700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 7.6e-73 278.5 344 58.7
Gorai.003G058500 Gossypium raimondii HOM05D004645 ORTHO05D005693 1.7e-72 277.3 347 58.2
HanXRQChr11g0333681 Helianthus annuus HOM05D004645 ORTHO05D005693 6.4e-72 275.4 331 50.2
Thecc.05G223300 Theobroma cacao HOM05D004645 ORTHO05D005693 8.4e-72 275.0 342 57.3
Gohir.A02G114700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 2.4e-71 273.5 343 57.4
BcaC09g47748 Brassica carinata HOM05D004645 ORTHO05D005693 4.2e-71 272.7 332 58.1
Manes.09G130100 Manihot esculenta HOM05D004645 ORTHO05D005693 7.8e-70 268.5 339 54.9
Gohir.A13G158000 Gossypium hirsutum HOM05D004645 ORTHO05D005693 1.0e-69 268.1 336 58.0
Potri.013G076800 Populus trichocarpa HOM05D004645 ORTHO05D005693 1.0e-69 268.1 342 50.9
Atru.chr12.1851 Acer truncatum HOM05D004645 ORTHO05D005693 1.3e-69 267.7 338 57.7
Manes.08G160200 Manihot esculenta HOM05D004645 ORTHO05D005693 5.1e-69 265.8 342 53.5
CiPaw.06G036400 Carya illinoinensis HOM05D004645 ORTHO05D005693 1.1e-68 264.6 339 57.2
Lj1g0014871 Lotus japonicus HOM05D004645 ORTHO05D005693 3.3e-68 263.1 345 53.3
CiPaw.05G212200 Carya illinoinensis HOM05D004645 ORTHO05D005693 5.6e-68 262.3 338 54.4
Duzib177G0889 Durio zibethinus HOM05D004645 ORTHO05D005693 7.3e-68 261.9 358 54.5
TWI60G0474 Tripterygium wilfordii HOM05D004645 ORTHO05D005693 7.3e-68 261.9 343 54.5
FAN10G3994 Fragaria x ananassa HOM05D004645 ORTHO05D005693 1.3e-67 261.2 336 50.9
GSVIVG01024286001 Vitis vinifera HOM05D004645 ORTHO05D005693 1.3e-67 261.2 264 57.2
MD01G1239600 Malus domestica HOM05D004645 ORTHO05D005693 1.6e-67 260.8 340 53.8
Medtr0004s0240 Medicago truncatula HOM05D004645 ORTHO05D005693 1.6e-67 260.8 334 56.9
Dinv01810 Davidia involucrata HOM05D004645 ORTHO05D005693 2.8e-67 260.0 347 56.2
Gohir.D13G162500 Gossypium hirsutum HOM05D004645 ORTHO05D005693 2.8e-67 260.0 336 56.2
RcHm_v2.0_Chr1g0384691 Rosa chinensis HOM05D004645 ORTHO05D005693 4.8e-67 259.2 339 53.7
ECA238G1292 Erigeron canadensis HOM05D004645 ORTHO05D005693 6.2e-67 258.8 251 57.0
Nitab4.5_0009278g0030 Nicotiana tabacum HOM05D004645 ORTHO05D005693 6.2e-67 258.8 358 47.2
CSS0046309 Camellia sinensis var. sinensis HOM05D004645 ORTHO05D005693 8.1e-67 258.5 345 55.7
Actinidia33801 Actinidia chinensis HOM05D004645 ORTHO05D005693 1.4e-66 257.7 342 55.6
Aa31LG5G13980 Aethionema arabicum HOM05D000507 ORTHO05D000416 1.4e-66 257.7 266 58.6
Ciclev10031859m.g Citrus clementina HOM05D004645 ORTHO05D005693 1.4e-66 257.7 343 56.9
VMungo1127G1262 Vigna mungo HOM05D004645 ORTHO05D005693 1.4e-66 257.7 340 52.6
FvH4_7g34300 Fragaria vesca HOM05D004645 ORTHO05D005693 3.1e-66 256.5 346 53.2
HanXRQChr14g0434641 Helianthus annuus HOM05D004645 ORTHO05D005693 3.1e-66 256.5 331 48.6
Prupe.2G329500 Prunus persica HOM05D004645 ORTHO05D005693 3.1e-66 256.5 263 55.1
CSS0029852 Camellia sinensis var. sinensis HOM05D004645 ORTHO05D005693 5.3e-66 255.8 346 56.1
Cc02_g00050 Coffea canephora HOM05D004645 ORTHO05D005693 5.3e-66 255.8 344 53.5
Phvul.011G016900 Phaseolus vulgaris HOM05D004645 ORTHO05D005693 6.9e-66 255.4 340 52.4
CANSAT21G0324 Cannabis sativa HOM05D004645 ORTHO05D005693 9.0e-66 255.0 341 54.8
Hund09812 Selenicereus undatus HOM05D004645 ORTHO05D005693 1.5e-65 254.2 260 56.5
TWI32G1082 Tripterygium wilfordii HOM05D004645 ORTHO05D005693 2.0e-65 253.8 346 56.6
Glyma.09G223000 Glycine max HOM05D004645 ORTHO05D005693 4.5e-65 252.7 340 51.5
Glyma.12G014000 Glycine max HOM05D004645 ORTHO05D005693 4.5e-65 252.7 341 51.9
PGR119G0624 Punica granatum HOM05D004645 ORTHO05D005693 7.6e-65 251.9 340 55.6
arahy.Tifrunner.gnm1.ann1.3IB4NC Arachis hypogaea HOM05D004645 ORTHO05D005693 9.9e-65 251.5 265 56.2
arahy.Tifrunner.gnm1.ann1.7F5N7U Arachis hypogaea HOM05D004645 ORTHO05D005693 9.9e-65 251.5 265 56.2
Hma1.2p1_0419F.1_g149550 Hydrangea macrophylla HOM05D004645 ORTHO05D005693 9.9e-65 251.5 258 56.6
Lj3C883G6 Lonicera japonica HOM05D000507 ORTHO05D000416 9.9e-65 251.5 258 57.8
Oeu028988.1 Olea europaea HOM05D004645 ORTHO05D005693 1.3e-64 251.1 348 49.7
Potri.019G042800 Populus trichocarpa HOM05D004645 ORTHO05D005693 3.8e-64 249.6 264 57.2
TAR629G2315 Trochodendron aralioides HOM05D004645 ORTHO05D005693 3.8e-64 249.6 342 55.3
Lsat_1_v5_gn_8_3080 Lactuca sativa HOM05D004645 ORTHO05D005693 4.9e-64 249.2 336 47.3
CAN.G732.33 Capsicum annuum HOM05D004645 ORTHO05D005693 1.1e-63 248.1 341 49.0
Solyc03g097300.4 Solanum lycopersicum HOM05D004645 ORTHO05D005693 1.1e-63 248.1 351 49.0
Sopen03g028070 Solanum pennellii HOM05D004645 ORTHO05D005693 1.1e-63 248.1 351 49.0
Lj5g0009502 Lotus japonicus HOM05D004645 ORTHO05D005693 1.4e-63 247.7 261 55.2
Peaxi162Scf00516g00425 Petunia axillaris HOM05D004645 ORTHO05D005693 1.4e-63 247.7 341 55.4
MSTRG.26920 Avicennia marina HOM05D004645 ORTHO05D005693 4.2e-63 246.1 352 46.0
Gorai.013G184600 Gossypium raimondii HOM05D004645 ORTHO05D005693 9.3e-63 245.0 337 55.2
PGSC0003DMG400026490 Solanum tuberosum HOM05D004645 ORTHO05D005693 9.3e-63 245.0 341 49.6
Duzib128G1942 Durio zibethinus HOM05D004645 ORTHO05D005693 3.5e-62 243.0 344 53.8
Nitab4.5_0000021g0850 Nicotiana tabacum HOM05D004645 ORTHO05D005693 3.5e-62 243.0 261 55.6
Sed0013778 Sechium edule HOM05D004645 ORTHO05D005693 3.5e-62 243.0 342 53.8
Lalb_Chr03g0037841 Lupinus albus HOM05D004645 ORTHO05D005693 2.3e-61 240.4 339 53.1
FAN03G2055 Fragaria x ananassa HOM05D004645 ORTHO05D005693 3.0e-61 240.0 368 51.1
PSO063G6220 Papaver somniferum HOM05D004645 ORTHO05D005693 8.7e-61 238.4 339 53.4
PSO782G2658 Papaver somniferum HOM05D004645 ORTHO05D005693 1.1e-60 238.0 339 49.6
Migut.L00703 Erythranthe guttata HOM05D004645 ORTHO05D005693 7.4e-60 235.3 348 49.1
TAR633G2534 Trochodendron aralioides HOM05D004645 ORTHO05D005693 2.8e-59 233.4 250 55.2
CARHR077490 Cardamine hirsuta HOM05D004645 ORTHO05D005693 3.7e-59 233.0 217 68.7
Lalb_Chr19g0140101 Lupinus albus HOM05D004645 ORTHO05D005693 4.8e-59 232.6 259 53.3
MELO3C014340.2 Cucumis melo HOM05D004645 ORTHO05D005693 8.1e-59 231.9 340 53.8
ClCG09G013170 Citrullus lanatus HOM05D004645 ORTHO05D005693 1.8e-58 230.7 339 50.7
Oeu027899.1 Olea europaea HOM05D004645 ORTHO05D005693 1.8e-58 230.7 354 44.9
SHI15009 Sapria himalayana HOM05D004645 ORTHO05D005693 1.8e-58 230.7 340 47.4
TPR.G9835 Trifolium pratense HOM05D004645 ORTHO05D005693 1.7e-56 224.2 336 52.7
Aqoxy5G00549 Aquilegia oxysepala HOM05D004645 ORTHO05D005693 6.4e-56 222.2 259 48.3
CsaV3_6G036830 Cucumis sativus L. HOM05D004645 ORTHO05D005693 6.4e-56 222.2 261 52.1
HanXRQChr05g0156891 Helianthus annuus HOM05D004645 ORTHO05D005693 6.4e-56 222.2 243 52.7
Sabra19G0053400 Salix brachista HOM05D004645 ORTHO05D005693 2.4e-55 220.3 295 49.2
unitig_92.g28227 Utricularia gibba HOM05D004645 ORTHO05D005693 3.2e-55 219.9 246 51.6
CDE04G1041 Ceratophyllum demersum HOM05D004645 ORTHO05D005693 4.2e-55 219.5 336 42.9
SGA_v2.0_scaffold18G08211 Striga asiatica HOM05D004645 ORTHO05D005693 5.5e-55 219.2 345 49.3
ECA233G1188 Erigeron canadensis HOM05D004645 ORTHO05D005693 9.3e-55 218.4 241 52.7
ATR0582G008 Amborella trichopoda HOM05D004645 ORTHO05D005693 3.7e-51 206.5 330 40.9
AUR62028214 Chenopodium quinoa HOM05D004645 ORTHO05D005693 4.8e-51 206.1 256 49.6
Os12g0465700 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 2.2e-48 197.2 343 40.5
COL.COLO4_15124 Corchorus olitorius HOM05D004645 ORTHO05D005693 2.5e-47 193.7 228 52.6
AUR62002096 Chenopodium quinoa HOM05D004645 ORTHO05D005693 5.5e-47 192.6 261 47.9
EL10Ac3g05041 Beta vulgaris HOM05D004645 ORTHO05D005693 9.3e-47 191.8 412 39.6
DCAR_014580 Daucus carota HOM05D004645 ORTHO05D005693 9.3e-47 191.8 249 46.2
vmacro06368 Vaccinium macrocarpon HOM05D004645 ORTHO05D005693 6.0e-46 189.1 240 52.5
DCAR_010525 Daucus carota HOM05D004645 ORTHO05D005693 1.5e-44 184.5 229 52.0
Ah.04g156130 Amaranthus hybridus HOM05D004645 ORTHO05D005693 1.9e-44 184.1 355 43.4
QL09p020526 Quercus lobata HOM05D004645 ORTHO05D005693 6.3e-43 179.1 225 50.2
HPP92_006448 Vanilla planifolia HOM05D004645 ORTHO05D005693 6.3e-43 179.1 343 46.4
Haze_00365 Corylus avellana HOM05D004645 ORTHO05D005693 1.8e-42 177.6 224 49.1
Ca_19601_v3 Cicer arietinum L. HOM05D004645 ORTHO05D005693 4.1e-42 176.4 225 49.8
Sc08g0005180 Simmondsia chinensis HOM05D004645 ORTHO05D005693 2.9e-40 170.2 227 49.3
Rhsim03G0224700 Rhododendron simsii HOM05D004645 ORTHO05D005693 2.5e-39 167.2 345 42.9
SEGI_39287 Sequoiadendron giganteum HOM05D004645 ORTHO05D005693 4.3e-36 156.4 271 36.5
Lj3g0007707 Lotus japonicus HOM05D004645 ORTHO05D005693 1.3e-35 154.8 213 48.4
HPP92_027983 Vanilla planifolia HOM05D004645 ORTHO05D005693 3.4e-33 146.7 215 52.6
Cfa016080 Carpinus fangiana HOM05D004645 ORTHO05D005693 4.2e-31 139.8 193 46.6
Psat7g154680 Pisum sativum HOM05D004645 ORTHO05D005693 1.6e-30 137.9 163 49.7
FAN01G0394 Fragaria x ananassa HOM05D004645 ORTHO05D005693 6.9e-26 122.5 102 60.8
Pp3c11_2710 Physcomitrium patens HOM05D004645 ORTHO05D005693 3.4e-25 120.2 136 41.9
AagrBONN_evm.TU.Sc2ySwM_228.1766 Anthoceros agrestis HOM05D004645 ORTHO05D005693 2.5e-23 114.0 157 41.4
Mapoly0012s0180 Marchantia polymorpha HOM05D004645 ORTHO05D005693 1.2e-22 111.7 139 40.3
Os04g0393100 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 3.6e-22 110.2 114 48.2
TAR636G0353 Trochodendron aralioides HOM05D004645 ORTHO05D005693 4.7e-22 109.8 136 52.2
Os04g0393200 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 3.3e-20 103.6 112 48.2
Cpa.g.c34419 Carica papaya HOM05D004645 ORTHO05D005693 2.2e-19 100.9 124 66.9
Zm00001eb421230 Zea mays HOM05D004645 ORTHO05D005693 7.0e-18 95.9 119 41.2
CBR_g4003 Chara braunii HOM05D004645 ORTHO05D005693 2.6e-17 94.0 154 37.7
HPP92_028759 Vanilla planifolia HOM05D004645 ORTHO05D005693 2.9e-16 90.5 157 40.8
Dinv17242 Davidia involucrata HOM05D004645 ORTHO05D005693 3.8e-16 90.1 122 57.4
AL3G45560 Arabidopsis lyrata HOM05D004645 ORTHO05D005693 1.5e-15 88.2 72 59.7
FAN01G2860 Fragaria x ananassa HOM05D004645 ORTHO05D005693 3.0e-13 80.5 124 55.6
Psat0s904g0040 Pisum sativum HOM05D004645 ORTHO05D005693 4.0e-13 80.1 121 42.1
Haze_00364 Corylus avellana HOM05D004645 ORTHO05D005693 8.8e-13 79.0 117 65.0
QL09p020516 Quercus lobata HOM05D004645 ORTHO05D005693 1.7e-11 74.7 37 83.8
Actinidia04560 Actinidia chinensis HOM05D004645 ORTHO05D005693 5.5e-07 59.7 112 45.5
ECA075G0001 Erigeron canadensis HOM05D004645 ORTHO05D005693 7.2e-07 59.3 35 74.3


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