Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s0161 Capsella rubella HOM05D004418 ORTHO05D005222 3.1e-165 585.1 300 100.0
AT3G02500 Arabidopsis thaliana HOM05D004418 ORTHO05D005222 5.0e-91 338.6 304 67.8
AL3G11860 Arabidopsis lyrata HOM05D004418 ORTHO05D005222 7.2e-90 334.7 303 68.6
CARHR076500 Cardamine hirsuta HOM05D004418 ORTHO05D005222 2.1e-73 280.0 246 66.3
A03p32980 Brassica napus HOM05D004418 ORTHO05D005222 6.1e-65 251.9 294 57.5
BraA03t12466Z Brassica rapa HOM05D004418 ORTHO05D005222 1.0e-64 251.1 294 58.5
AL6G26910 Arabidopsis lyrata HOM05D004418 ORTHO05D005222 6.8e-64 248.4 341 51.6
C03p40110 Brassica napus HOM05D004418 ORTHO05D005222 6.8e-64 248.4 294 56.8
BraA03t10082Z Brassica rapa HOM05D004418 ORTHO05D005222 1.2e-63 247.7 343 51.3
A03p07540 Brassica napus HOM05D004418 ORTHO05D005222 1.5e-63 247.3 334 52.1
BolC3t16277H Brassica oleracea HOM05D004418 ORTHO05D005222 1.5e-63 247.3 294 56.8
C09p60990 Brassica napus HOM05D004418 ORTHO05D005222 7.5e-63 245.0 350 50.0
BolC9t58946H Brassica oleracea HOM05D004418 ORTHO05D005222 7.5e-63 245.0 350 50.0
C03p08770 Brassica napus HOM05D004418 ORTHO05D005222 9.8e-63 244.6 334 51.5
Thhalv10014096m.g Eutrema salsugineum HOM05D004418 ORTHO05D005222 2.8e-62 243.0 329 52.0
Aa31LG5G13000 Aethionema arabicum HOM05D004418 ORTHO05D005222 6.3e-62 241.9 247 60.3
BolC3t13373H Brassica oleracea HOM05D004418 ORTHO05D005222 6.3e-62 241.9 341 50.4
BcaC04g18914 Brassica carinata HOM05D004418 ORTHO05D005222 5.4e-61 238.8 352 49.1
BcaB08g36881 Brassica carinata HOM05D004418 ORTHO05D005222 2.0e-60 236.9 347 48.7
A10p23020 Brassica napus HOM05D004418 ORTHO05D005222 7.7e-60 235.0 352 48.3
BraA10t44371Z Brassica rapa HOM05D004418 ORTHO05D005222 7.7e-60 235.0 352 48.3
BcaC01g04442 Brassica carinata HOM05D004418 ORTHO05D005222 2.9e-59 233.0 237 62.9
Sp6g28100 Schrenkiella parvula HOM05D004418 ORTHO05D005222 3.3e-58 229.6 344 48.3
BcaC01g04556 Brassica carinata HOM05D004418 ORTHO05D005222 1.0e-56 224.6 293 53.6
CARHR197280 Cardamine hirsuta HOM05D004418 ORTHO05D005222 1.8e-56 223.8 325 49.5
AT5G16030 Arabidopsis thaliana HOM05D004418 ORTHO05D005222 6.8e-56 221.9 342 48.5
Carub.0006s1422 Capsella rubella HOM05D004418 ORTHO05D005222 1.2e-55 221.1 331 48.3
Aa31LG11G13580 Aethionema arabicum HOM05D004418 ORTHO05D005222 4.4e-55 219.2 324 49.4
BcaB01g05008 Brassica carinata HOM05D004418 ORTHO05D005222 7.5e-55 218.4 253 56.5
BcaNung02220 Brassica carinata HOM05D004418 ORTHO05D005222 2.2e-54 216.9 347 47.8
THA.LOC104803001 Tarenaya hassleriana HOM05D004418 ORTHO05D005222 2.2e-54 216.9 305 51.8
BcaC03g18465 Brassica carinata HOM05D004418 ORTHO05D005222 1.8e-53 213.8 348 47.7
C02p08130 Brassica napus HOM05D004418 ORTHO05D005222 1.8e-53 213.8 348 47.7
A02p03360 Brassica napus HOM05D004418 ORTHO05D005222 3.2e-53 213.0 346 47.4
BraA02t05307Z Brassica rapa HOM05D004418 ORTHO05D005222 7.8e-52 208.4 347 47.3
BolC2t06735H Brassica oleracea HOM05D004418 ORTHO05D005222 3.3e-50 203.0 361 45.4
Sed0007454 Sechium edule HOM05D004418 ORTHO05D005222 2.0e-44 183.7 304 47.7
Cpa.g.sc179.25 Carica papaya HOM05D004418 ORTHO05D005222 4.6e-44 182.6 312 43.9
ClCG11G005360 Citrullus lanatus HOM05D004418 ORTHO05D005222 1.7e-43 180.6 295 44.1
arahy.Tifrunner.gnm1.ann1.FZV4HQ Arachis hypogaea HOM05D004418 ORTHO05D005222 2.5e-42 176.8 294 44.9
arahy.Tifrunner.gnm1.ann1.I4UW8B Arachis hypogaea HOM05D004418 ORTHO05D005222 2.5e-42 176.8 294 44.9
Thecc.04G137500 Theobroma cacao HOM05D004418 ORTHO05D005222 7.3e-42 175.3 287 44.9
Phvul.004G062900 Phaseolus vulgaris HOM05D004418 ORTHO05D005222 1.2e-41 174.5 287 41.8
Lalb_Chr06g0174671 Lupinus albus HOM05D004418 ORTHO05D005222 3.6e-41 172.9 304 41.4
Sabra04G0078200 Salix brachista HOM05D004418 ORTHO05D005222 3.6e-41 172.9 302 45.7
Psat3g190400 Pisum sativum HOM05D004418 ORTHO05D005222 1.8e-40 170.6 284 45.1
TPR.G4552 Trifolium pratense HOM05D004418 ORTHO05D005222 1.8e-40 170.6 282 44.7
Manes.01G108300 Manihot esculenta HOM05D004418 ORTHO05D005222 8.9e-40 168.3 211 49.8
Prupe.3G239700 Prunus persica HOM05D004418 ORTHO05D005222 8.9e-40 168.3 300 41.7
Sopen02g030440 Solanum pennellii HOM05D004418 ORTHO05D005222 8.9e-40 168.3 303 42.2
Potri.004G102200 Populus trichocarpa HOM05D004418 ORTHO05D005222 1.2e-39 167.9 308 42.9
CiPaw.04G040400 Carya illinoinensis HOM05D004418 ORTHO05D005222 1.5e-39 167.5 295 44.1
Lj1g0022779 Lotus japonicus HOM05D004418 ORTHO05D005222 1.5e-39 167.5 270 46.7
VMungo0464G1669 Vigna mungo HOM05D004418 ORTHO05D005222 2.6e-39 166.8 284 41.9
Glyma.18G281000 Glycine max HOM05D004418 ORTHO05D005222 3.4e-39 166.4 278 46.0
Potri.017G112600 Populus trichocarpa HOM05D004418 ORTHO05D005222 3.4e-39 166.4 300 43.7
Cfa007945 Carpinus fangiana HOM05D004418 ORTHO05D005222 4.4e-39 166.0 308 45.5
CsaV3_5G039140 Cucumis sativus L. HOM05D004418 ORTHO05D005222 4.4e-39 166.0 297 44.1
Gohir.A07G071400 Gossypium hirsutum HOM05D004418 ORTHO05D005222 5.8e-39 165.6 288 44.4
Cc07_g09010 Coffea canephora HOM05D004418 ORTHO05D005222 1.3e-38 164.5 281 45.9
CiPaw.03G059700 Carya illinoinensis HOM05D004418 ORTHO05D005222 2.2e-38 163.7 286 42.3
Dinv34848 Davidia involucrata HOM05D004418 ORTHO05D005222 2.2e-38 163.7 247 47.0
Eucgr.F02480 Eucalyptus grandis HOM05D004418 ORTHO05D005222 2.2e-38 163.7 298 40.6
COL.COLO4_16191 Corchorus olitorius HOM05D004418 ORTHO05D005222 3.7e-38 162.9 232 47.4
GSVIVG01036443001 Vitis vinifera HOM05D004418 ORTHO05D005222 3.7e-38 162.9 306 44.4
Nn4g23746 Nelumbo nucifera HOM05D004418 ORTHO05D005222 4.9e-38 162.5 272 44.5
Haze_14129 Corylus avellana HOM05D004418 ORTHO05D005222 6.4e-38 162.2 245 47.8
Glyma.08G256900 Glycine max HOM05D004418 ORTHO05D005222 6.4e-38 162.2 276 44.2
MD17G1074300 Malus domestica HOM05D004418 ORTHO05D005222 8.3e-38 161.8 291 41.9
Nn3g17760 Nelumbo nucifera HOM05D004418 ORTHO05D005222 8.3e-38 161.8 271 43.5
Oeu030758.1 Olea europaea HOM05D004418 ORTHO05D005222 8.3e-38 161.8 219 50.7
CANSAT64G2567 Cannabis sativa HOM05D004418 ORTHO05D005222 1.9e-37 160.6 204 50.5
Nitab4.5_0004118g0100 Nicotiana tabacum HOM05D004418 ORTHO05D005222 2.4e-37 160.2 319 40.1
TAR462G0001 Trochodendron aralioides HOM05D004418 ORTHO05D005222 2.4e-37 160.2 288 42.7
Actinidia15868 Actinidia chinensis HOM05D004418 ORTHO05D005222 5.4e-37 159.1 206 50.5
Glyma.19G045400 Glycine max HOM05D004418 ORTHO05D005222 1.2e-36 157.9 302 39.4
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 1.2e-36 157.9 227 48.5
Glyma.13G046900 Glycine max HOM05D004418 ORTHO05D005222 1.6e-36 157.5 295 40.3
Nitab4.5_0008781g0030 Nicotiana tabacum HOM05D004418 ORTHO05D005222 1.6e-36 157.5 319 39.5
Nitab4.5_0000628g0180 Nicotiana tabacum HOM05D004418 ORTHO05D005222 2.1e-36 157.1 307 42.7
Gohir.D11G168666 Gossypium hirsutum HOM05D004418 ORTHO05D005222 2.7e-36 156.8 295 40.7
RcHm_v2.0_Chr2g0163131 Rosa chinensis HOM05D004418 ORTHO05D005222 2.7e-36 156.8 215 48.8
Hma1.2p1_0550F.1_g177250 Hydrangea macrophylla HOM05D004418 ORTHO05D005222 3.5e-36 156.4 245 48.2
Lj2g0026691 Lotus japonicus HOM05D004418 ORTHO05D005222 3.5e-36 156.4 278 42.4
QL02p052558 Quercus lobata HOM05D004418 ORTHO05D005222 3.5e-36 156.4 294 42.2
PGSC0003DMG400024185 Solanum tuberosum HOM05D004418 ORTHO05D005222 3.5e-36 156.4 317 40.4
CAN.G358.137 Capsicum annuum HOM05D004418 ORTHO05D005222 4.6e-36 156.0 222 46.8
FAN14G2637 Fragaria x ananassa HOM05D004418 ORTHO05D005222 4.6e-36 156.0 207 49.3
FvH4_6g45350 Fragaria vesca HOM05D004418 ORTHO05D005222 6.0e-36 155.6 207 49.3
Gohir.D07G075900 Gossypium hirsutum HOM05D004418 ORTHO05D005222 6.0e-36 155.6 281 42.3
FAN02G0751 Fragaria x ananassa HOM05D004418 ORTHO05D005222 7.8e-36 155.2 207 49.3
Gorai.001G080100 Gossypium raimondii HOM05D004418 ORTHO05D005222 7.8e-36 155.2 281 42.0
Sopen02g014090 Solanum pennellii HOM05D004418 ORTHO05D005222 7.8e-36 155.2 309 39.2
FAN05G3990 Fragaria x ananassa HOM05D004418 ORTHO05D005222 1.0e-35 154.8 207 49.3
Phvul.008G020100 Phaseolus vulgaris HOM05D004418 ORTHO05D005222 1.0e-35 154.8 271 42.8
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 1.0e-35 154.8 273 42.5
Ah.10g037550 Amaranthus hybridus HOM05D004418 ORTHO05D005222 1.3e-35 154.5 260 43.8
Medtr7g018370 Medicago truncatula HOM05D004418 ORTHO05D005222 1.7e-35 154.1 262 44.7
Gorai.007G180200 Gossypium raimondii HOM05D004418 ORTHO05D005222 3.0e-35 153.3 295 40.7
ClCG05G012070 Citrullus lanatus HOM05D004418 ORTHO05D005222 5.1e-35 152.5 292 40.4
Duzib133G1448 Durio zibethinus HOM05D004418 ORTHO05D005222 5.1e-35 152.5 263 43.0
Medtr6g017240 Medicago truncatula HOM05D004418 ORTHO05D005222 5.1e-35 152.5 288 43.1
Sabra17G0093300 Salix brachista HOM05D004418 ORTHO05D005222 5.1e-35 152.5 267 46.4
Solyc02g063030.4 Solanum lycopersicum HOM05D004418 ORTHO05D005222 1.1e-34 151.4 310 39.0
Ciclev10012140m.g Citrus clementina HOM05D004418 ORTHO05D005222 3.3e-34 149.8 308 41.9
MELO3C022089.2 Cucumis melo HOM05D004418 ORTHO05D005222 3.3e-34 149.8 160 56.9
Gohir.A11G162400 Gossypium hirsutum HOM05D004418 ORTHO05D005222 3.3e-34 149.8 297 40.4
TPR.G32452 Trifolium pratense HOM05D004418 ORTHO05D005222 4.3e-34 149.4 301 41.2
Dinv33929 Davidia involucrata HOM05D004418 ORTHO05D005222 5.6e-34 149.1 273 45.4
MELO3C023762.2 Cucumis melo HOM05D004418 ORTHO05D005222 7.3e-34 148.7 298 39.6
MD09G1084800 Malus domestica HOM05D004418 ORTHO05D005222 7.3e-34 148.7 291 40.2
Solyc02g085750.4 Solanum lycopersicum HOM05D004418 ORTHO05D005222 7.3e-34 148.7 291 41.9
CsaV3_3G020330 Cucumis sativus L. HOM05D004418 ORTHO05D005222 1.6e-33 147.5 292 39.0
CSS0030087 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 2.1e-33 147.1 323 38.7
Actinidia36309 Actinidia chinensis HOM05D004418 ORTHO05D005222 2.8e-33 146.7 293 39.6
CAN.G23.16 Capsicum annuum HOM05D004418 ORTHO05D005222 2.8e-33 146.7 327 38.5
DCAR_017217 Daucus carota HOM05D004418 ORTHO05D005222 2.8e-33 146.7 294 40.8
CSS0000095 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 3.6e-33 146.4 246 43.1
Hund13733 Selenicereus undatus HOM05D004418 ORTHO05D005222 8.1e-33 145.2 160 53.1
Oeu052993.1 Olea europaea HOM05D004418 ORTHO05D005222 1.8e-32 144.1 209 46.9
PGR042G3608 Punica granatum HOM05D004418 ORTHO05D005222 1.8e-32 144.1 274 42.7
Atru.chr8.826 Acer truncatum HOM05D004418 ORTHO05D005222 2.3e-32 143.7 291 39.9
MSTRG.23562 Avicennia marina HOM05D004418 ORTHO05D005222 2.3e-32 143.7 289 40.5
Lalb_Chr10g0092251 Lupinus albus HOM05D004418 ORTHO05D005222 3.1e-32 143.3 274 40.9
HanXRQChr12g0376561 Helianthus annuus HOM05D004418 ORTHO05D005222 6.8e-32 142.1 286 40.6
TWI75G1693 Tripterygium wilfordii HOM05D004418 ORTHO05D005222 1.2e-31 141.4 288 38.9
EL10Ac2g04606 Beta vulgaris HOM05D004418 ORTHO05D005222 5.8e-31 139.0 316 37.7
Psat1g012960 Pisum sativum HOM05D004418 ORTHO05D005222 7.6e-31 138.7 244 39.8
CSS0011812 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 1.7e-30 137.5 311 41.8
Migut.L00303 Erythranthe guttata HOM05D004418 ORTHO05D005222 1.7e-30 137.5 285 41.1
PSO478G2162 Papaver somniferum HOM05D004418 ORTHO05D005222 8.4e-30 135.2 277 41.9
Lj4A194T37 Lonicera japonica HOM05D004418 ORTHO05D005222 1.1e-29 134.8 185 49.7
Peaxi162Scf01327g00136 Petunia axillaris HOM05D004418 ORTHO05D005222 1.1e-29 134.8 275 39.3
Aqoxy3G00366 Aquilegia oxysepala HOM05D004418 ORTHO05D005222 1.4e-29 134.4 274 36.1
TAR278G0004 Trochodendron aralioides HOM05D004418 ORTHO05D005222 1.4e-29 134.4 287 39.0
Sed0007873 Sechium edule HOM05D004418 ORTHO05D005222 2.4e-29 133.7 296 38.2
Nitab4.5_0007207g0030 Nicotiana tabacum HOM05D004418 ORTHO05D005222 9.2e-29 131.7 221 43.0
PSO017G3409 Papaver somniferum HOM05D004418 ORTHO05D005222 1.2e-28 131.3 277 41.2
Aqoxy3G03921 Aquilegia oxysepala HOM05D004418 ORTHO05D005222 2.1e-28 130.6 334 35.9
ECA246G2173 Erigeron canadensis HOM05D004418 ORTHO05D005222 2.1e-28 130.6 292 40.1
SGA_v2.0_scaffold33G13429 Striga asiatica HOM05D004418 ORTHO05D005222 3.5e-28 129.8 303 37.3
Migut.H00200 Erythranthe guttata HOM05D004418 ORTHO05D005222 1.1e-26 124.8 294 38.1
TWI79G1555 Tripterygium wilfordii HOM05D004418 ORTHO05D005222 2.1e-25 120.6 328 33.8
Peaxi162Scf00501g00012 Petunia axillaris HOM05D004418 ORTHO05D005222 1.2e-23 114.8 308 36.0
MBI09_g05206_MAGBIO Magnolia biondii HOM05D004418 ORTHO05D005222 1.5e-23 114.4 284 35.9
Lsat_1_v5_gn_3_80201 Lactuca sativa HOM05D004418 ORTHO05D005222 2.9e-22 110.2 227 40.1
MSTRG.3576 Avicennia marina HOM05D004418 ORTHO05D005222 3.8e-22 109.8 296 34.8
PGR004G1179 Punica granatum HOM05D004418 ORTHO05D005222 4.9e-22 109.4 187 42.2
Ah.16g101950 Amaranthus hybridus HOM05D004418 ORTHO05D005222 1.1e-21 108.2 184 39.1
SalBow3G2364 Salvia bowleyana HOM05D004418 ORTHO05D005222 2.1e-20 104.0 252 34.9
SalBow3G3548 Salvia bowleyana HOM05D004418 ORTHO05D005222 2.7e-20 103.6 253 34.8
vmacro05572 Vaccinium macrocarpon HOM05D004418 ORTHO05D005222 7.8e-20 102.1 260 35.4
arahy.Tifrunner.gnm1.ann1.SB4BUV Arachis hypogaea HOM05D004418 ORTHO05D005222 1.3e-19 101.3 283 34.3
SalBow5G1629 Salvia bowleyana HOM05D004418 ORTHO05D005222 3.3e-18 96.7 280 34.6
ATR0686G091 Amborella trichopoda HOM05D004418 ORTHO05D005222 4.8e-17 92.8 152 40.8
Oeu052991.1 Olea europaea HOM05D004418 ORTHO05D005222 4.8e-17 92.8 97 55.7
arahy.Tifrunner.gnm1.ann1.554YPX Arachis hypogaea HOM05D004418 ORTHO05D005222 2.0e-15 87.4 254 34.3
SGA_v2.0_scaffold49G18089 Striga asiatica HOM05D004418 ORTHO05D005222 7.6e-15 85.5 226 30.5
Sc11g0008220 Simmondsia chinensis HOM05D004418 ORTHO05D005222 4.2e-13 79.7 116 46.6
RcHm_v2.0_Chr4g0404491 Rosa chinensis HOM05D004418 ORTHO05D005222 9.3e-13 78.6 108 49.1
unitig_32.g11894 Utricularia gibba HOM05D004418 ORTHO05D005222 1.6e-12 77.8 79 48.1
CAN.G144.13 Capsicum annuum HOM05D004418 ORTHO05D005222 1.3e-06 58.2 63 58.7


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