Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s0115 Capsella rubella HOM05D010061 ORTHO05D015940 1.4e-190 669.5 345 100.0
AT3G01030 Arabidopsis thaliana HOM05D010061 ORTHO05D015940 6.9e-121 438.0 348 72.4
AL3G11240 Arabidopsis lyrata HOM05D010061 ORTHO05D015940 2.6e-120 436.0 343 73.8
Sp3g01110 Schrenkiella parvula HOM05D010061 ORTHO05D015940 3.1e-68 263.1 367 51.8
C03p39850 Brassica napus HOM05D010061 ORTHO05D015940 1.7e-63 247.3 356 49.4
BolC3t16248H Brassica oleracea HOM05D010061 ORTHO05D015940 3.1e-60 236.5 358 48.0
BraA03t12444Z Brassica rapa HOM05D010061 ORTHO05D015940 8.9e-60 235.0 350 49.1
A03p32750 Brassica napus HOM05D010061 ORTHO05D015940 4.4e-59 232.6 350 48.9
Thhalv10022306m.g Eutrema salsugineum HOM05D010061 ORTHO05D015940 2.1e-56 223.8 357 49.6
BcaC01g04493 Brassica carinata HOM05D010061 ORTHO05D015940 1.0e-55 221.5 360 46.1
BcaC01g04459 Brassica carinata HOM05D010061 ORTHO05D015940 2.5e-54 216.9 321 48.0
Sp6g28620 Schrenkiella parvula HOM05D010061 ORTHO05D014864 9.9e-35 151.8 352 37.8
C03p08160 Brassica napus HOM05D010061 ORTHO05D014864 3.7e-29 133.3 366 38.8
THA.LOC104803130 Tarenaya hassleriana HOM05D010061 ORTHO05D014864 4.8e-29 132.9 316 38.3
BolC3t13313H Brassica oleracea HOM05D010061 ORTHO05D014864 6.2e-29 132.5 345 38.6
A03p07170 Brassica napus HOM05D010061 ORTHO05D014864 3.1e-28 130.2 339 37.5
BraA03t10039Z Brassica rapa HOM05D010061 ORTHO05D014864 9.0e-28 128.6 342 36.5
BcaB01g05050 Brassica carinata HOM05D010061 ORTHO05D014864 1.2e-27 128.3 330 38.2
Carub.0006s1364 Capsella rubella HOM05D010061 ORTHO05D014864 3.4e-27 126.7 373 35.9
Thhalv10015968m.g Eutrema salsugineum HOM05D010061 ORTHO05D014864 1.0e-23 115.2 347 33.7
CARHR197830 Cardamine hirsuta HOM05D010061 ORTHO05D014864 4.3e-22 109.8 372 33.1
AL6G26330 Arabidopsis lyrata HOM05D010061 ORTHO05D014864 1.8e-20 104.4 425 30.6
Thhalv10002882m.g Eutrema salsugineum HOM05D010061 ORTHO05D014864 1.5e-19 101.3 348 32.5
AT5G15480 Arabidopsis thaliana HOM05D010061 ORTHO05D014864 1.3e-15 88.2 423 29.3
CSS0006199 Camellia sinensis var. sinensis HOM05D001658 ORTHO05D001406 1.0e-10 72.0 372 27.2
COL.COLO4_21392 Corchorus olitorius HOM05D001658 ORTHO05D001406 6.5e-10 69.3 388 25.8
Actinidia17578 Actinidia chinensis HOM05D001658 ORTHO05D001406 8.5e-10 68.9 342 28.9
Sed0012205 Sechium edule HOM05D001658 ORTHO05D001406 1.6e-08 64.7 339 25.7
unitig_699.g19908 Utricularia gibba HOM05D001658 ORTHO05D001406 1.4e-07 61.6 294 26.2
Nitab4.5_0002881g0100 Nicotiana tabacum HOM05D001658 ORTHO05D001406 1.8e-07 61.2 325 28.6
MSTRG.9603 Avicennia marina HOM05D001658 ORTHO05D001406 2.3e-07 60.8 349 25.8
HanXRQChr04g0101431 Helianthus annuus HOM05D001658 ORTHO05D001406 3.9e-07 60.1 330 26.7
BcaC01g01750 Brassica carinata HOM05D001658 ORTHO05D001406 5.1e-07 59.7 325 26.5
C03p72310 Brassica napus HOM05D001658 ORTHO05D001406 5.1e-07 59.7 325 26.5
CARHR025380 Cardamine hirsuta HOM05D001658 ORTHO05D001406 8.8e-07 58.9 304 28.6
HPP92_018602 Vanilla planifolia HOM05D001658 ORTHO05D001406 1.1e-06 58.5 314 27.4
BraA07t29072Z Brassica rapa HOM05D001658 ORTHO05D001406 1.5e-06 58.2 347 26.8
TAR371G0514 Trochodendron aralioides HOM05D001658 ORTHO05D001406 1.5e-06 58.2 370 24.6
Psat5g211760 Pisum sativum HOM05D001658 ORTHO05D001406 1.9e-06 57.8 301 27.6
Manes.02G053200 Manihot esculenta HOM05D001658 ORTHO05D001406 2.5e-06 57.4 408 26.5
Rhsim10G0044400 Rhododendron simsii HOM05D001658 ORTHO05D001406 2.5e-06 57.4 324 26.5
Peaxi162Scf00201g00007 Petunia axillaris HOM05D001658 ORTHO05D001406 3.3e-06 57.0 346 28.0
Peaxi162Scf00013g00059 Petunia axillaris HOM05D001658 ORTHO05D001406 4.3e-06 56.6 320 28.4
unitig_747.g21187 Utricularia gibba HOM05D001658 ORTHO05D001406 5.7e-06 56.2 318 27.7
A07p13010 Brassica napus HOM05D001658 ORTHO05D001406 9.7e-06 55.5 347 26.5


User provided reference genes

Program Settings