Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 4.2e-116 421.4 216 100.0
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 1.2e-65 253.8 234 61.5
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 5.4e-63 245.0 231 59.7
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.6e-62 243.4 235 60.4
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 4.3e-60 235.3 232 58.6
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 1.2e-59 233.8 231 58.4
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 2.2e-56 223.0 234 57.3
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 4.6e-54 215.3 235 56.2
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 4.6e-54 215.3 235 56.2
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 3.0e-53 212.6 237 55.3
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 3.0e-53 212.6 237 55.3
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 3.0e-53 212.6 237 55.3
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 3.3e-52 209.1 228 55.3
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 3.3e-52 209.1 228 55.3
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 1.1e-50 204.1 217 53.9
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-50 204.1 229 56.8
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 4.0e-50 202.2 229 54.6
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-49 200.3 227 54.2
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 9.9e-49 197.6 229 53.3
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 2.2e-48 196.4 227 52.9
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 4.1e-47 192.2 204 57.4
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.7e-45 186.8 227 53.7
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-44 183.7 229 50.2
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 1.5e-44 183.7 229 50.2
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-44 183.3 233 49.8
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.9e-44 183.3 234 51.3
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-42 177.6 228 51.8
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 1.1e-42 177.6 234 49.1
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-42 176.8 230 47.8
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-42 176.8 227 48.5
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 4.0e-42 175.6 227 50.7
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 4.0e-42 175.6 227 50.7
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 5.2e-42 175.3 232 48.3
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 5.2e-42 175.3 232 48.3
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 8.9e-42 174.5 227 50.2
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-41 174.1 228 50.9
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 5.8e-41 171.8 227 49.8
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-39 166.8 229 47.6
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 1.9e-39 166.8 229 47.6
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 7.8e-38 161.4 227 43.2
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 1.0e-37 161.0 229 47.2
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-36 157.1 229 47.2
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 7.3e-36 154.8 221 46.2
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 9.6e-36 154.5 206 48.5
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-35 154.1 223 48.4
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-35 154.1 223 48.4
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-35 154.1 223 48.4
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 6.2e-35 151.8 221 44.8
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 6.2e-35 151.8 221 44.8
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 8.1e-35 151.4 223 48.9
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-34 151.0 221 45.7
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-34 151.0 221 45.7
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 4.0e-34 149.1 223 48.4
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 4.9e-32 142.1 224 43.3
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 1.1e-31 141.0 170 53.5
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 9.3e-31 137.9 216 43.5
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 3.5e-30 136.0 209 45.5
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 4.6e-30 135.6 219 46.6
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 4.6e-30 135.6 219 46.6
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 4.6e-30 135.6 219 46.6
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-29 134.0 193 44.6
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 2.3e-29 133.3 223 45.3
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 3.0e-29 132.9 235 39.1
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 6.7e-29 131.7 236 38.6
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 8.7e-29 131.3 230 38.7
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.9e-28 130.2 223 42.2
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 9.6e-28 127.9 230 38.3
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 9.6e-28 127.9 229 45.0
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 9.6e-28 127.9 229 45.0
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 4.8e-27 125.6 230 37.8
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 1.8e-26 123.6 199 45.7
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 1.8e-26 123.6 199 45.7
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 1.8e-26 123.6 199 45.7
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 3.1e-26 122.9 219 43.8
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 3.1e-26 122.9 219 43.8
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 9.0e-26 121.3 240 36.7
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 4.5e-25 119.0 170 48.2
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 5.5e-23 112.1 216 38.9
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-21 106.7 82 65.9
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 3.0e-21 106.3 229 36.2
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-20 104.4 216 36.6
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.6e-19 100.5 228 36.0
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-18 97.4 217 32.7
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-18 97.4 111 58.6
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 1.4e-18 97.4 217 32.7
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 3.1e-18 96.3 111 58.6
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 4.0e-18 95.9 205 32.7
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 4.0e-18 95.9 205 32.7
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 9.0e-18 94.7 205 32.7
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.3e-16 90.9 220 32.7
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 2.2e-16 90.1 90 57.8
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 2.2e-16 90.1 90 57.8
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 8.4e-16 88.2 132 46.2
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 8.4e-16 88.2 132 46.2
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 8.4e-16 88.2 132 46.2
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 5.5e-15 85.5 167 38.3
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 2.1e-14 83.6 222 35.1
Sp1g24730 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.5e-12 77.4 189 30.2
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 3.4e-09 66.2 81 53.1
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 1.7e-08 63.9 74 55.4
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 1.7e-08 63.9 74 55.4
THA.LOC104812280 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 2.2e-08 63.5 119 37.8
BcaB03g15050 Brassica carinata HOM05D000535 ORTHO05D000427 3.2e-07 59.7 230 28.7
Sp5g28260 Schrenkiella parvula HOM05D000535 ORTHO05D009010 4.2e-07 59.3 225 28.0
CARHR066380 Cardamine hirsuta HOM05D000535 ORTHO05D000427 1.6e-06 57.4 235 28.9
Thhalv10019129m.g Eutrema salsugineum HOM05D000535 ORTHO05D000427 1.6e-06 57.4 234 27.4
BolC6t39791H Brassica oleracea HOM05D000535 ORTHO05D009010 2.7e-06 56.6 203 30.5
BcaC08g46756 Brassica carinata HOM05D000535 ORTHO05D009010 3.6e-06 56.2 202 29.7
A07p39300 Brassica napus HOM05D000535 ORTHO05D009010 7.9e-06 55.1 202 29.2
BraA07t31479Z Brassica rapa HOM05D000535 ORTHO05D009010 7.9e-06 55.1 202 29.2


User provided reference genes

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