Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 8.0e-146 520.4 261 100.0
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 7.6e-96 354.4 265 72.1
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 3.9e-92 342.0 271 69.7
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 3.4e-80 302.4 271 61.6
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 1.4e-76 290.4 268 57.1
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 1.1e-75 287.3 273 59.3
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 2.0e-75 286.6 272 60.3
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 9.1e-73 277.7 286 57.0
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 2.2e-71 273.1 272 58.8
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 5.0e-71 271.9 262 58.4
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 7.7e-56 221.5 267 49.4
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 1.2e-51 207.6 183 63.9
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 5.5e-46 188.7 166 65.1
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 1.8e-44 183.7 200 53.5
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 7.7e-40 168.3 289 40.8
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 6.6e-39 165.2 270 40.7
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 1.1e-38 164.5 264 43.2
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.1e-38 164.5 259 41.7
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 4.7e-37 159.1 214 43.9
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 4.7e-37 159.1 269 39.0
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 2.3e-36 156.8 282 38.3
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 6.8e-36 155.2 292 39.7
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 8.9e-36 154.8 272 39.3
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 1.2e-35 154.5 281 39.1
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 2.6e-35 153.3 280 38.6
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 2.6e-35 153.3 177 52.5
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 3.4e-35 152.9 320 36.9
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 4.4e-35 152.5 177 52.5
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 5.7e-35 152.1 172 48.3
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 9.8e-35 151.4 300 38.0
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 9.8e-35 151.4 300 38.0
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 2.9e-34 149.8 171 49.7
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 2.9e-34 149.8 302 38.4
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 3.7e-34 149.4 276 37.0
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 3.7e-34 149.4 291 35.1
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 4.9e-34 149.1 275 36.7
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 1.4e-33 147.5 176 48.3
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 1.4e-33 147.5 281 38.4
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 1.6e-32 144.1 274 39.4
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 4.6e-32 142.5 162 50.0
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 7.8e-32 141.7 172 50.0
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 7.8e-32 141.7 272 38.6
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 7.8e-32 141.7 261 39.5
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 1.0e-31 141.4 277 38.3
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 1.0e-31 141.4 209 44.5
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 1.3e-31 141.0 284 35.2
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 2.3e-31 140.2 270 38.5
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 3.0e-31 139.8 275 37.8
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 8.6e-31 138.3 176 47.2
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 1.9e-30 137.1 285 36.1
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.6e-29 134.0 180 46.7
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 4.7e-29 132.5 265 35.8
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 4.7e-29 132.5 258 38.0
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 1.0e-28 131.3 298 32.2
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 2.3e-28 130.2 283 36.0
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 1.5e-27 127.5 255 37.3
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 7.5e-27 125.2 207 44.0
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 7.5e-27 125.2 117 57.3
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 1.7e-26 124.0 303 33.3
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 2.2e-26 123.6 276 35.5
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 2.9e-26 123.2 225 41.3
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 2.9e-26 123.2 274 34.7
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 8.3e-26 121.7 308 30.8
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 8.3e-26 121.7 265 37.7
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 1.4e-25 120.9 178 43.8
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 1.9e-25 120.6 259 35.5
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 2.4e-25 120.2 115 60.9
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 3.2e-25 119.8 288 36.5
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.6e-24 117.5 309 31.7
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 3.5e-24 116.3 105 58.1
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 6.0e-24 115.5 288 32.3
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 7.8e-24 115.2 154 47.4
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 1.3e-23 114.4 161 45.3
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 1.5e-22 110.9 270 35.6
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 1.9e-22 110.5 261 33.3
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 5.6e-22 109.0 156 45.5
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 7.3e-22 108.6 163 42.9
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 7.3e-22 108.6 135 43.0
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 1.2e-21 107.8 213 37.1
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 4.7e-21 105.9 303 30.4
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.3e-20 103.6 291 29.2
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.3e-20 103.6 158 42.4
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 4.0e-20 102.8 159 45.3
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 5.2e-20 102.4 287 32.1
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 1.2e-19 101.3 250 33.2
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 1.2e-19 101.3 130 45.4
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 2.6e-19 100.1 158 43.7
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 4.4e-19 99.4 122 49.2
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 1.9e-17 94.0 260 31.2
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 2.4e-17 93.6 108 49.1
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 5.4e-17 92.4 153 39.9
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 3.5e-16 89.7 105 54.3
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 6.6e-15 85.5 192 31.2
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 5.6e-14 82.4 214 29.9
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 1.2e-13 81.3 289 28.7
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 5.8e-11 72.4 48 66.7
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.3e-10 71.2 173 34.1
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 2.2e-10 70.5 109 38.5
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 9.2e-09 65.1 85 42.4
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 5.1e-07 59.3 131 35.9
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 6.6e-07 58.9 140 35.0


User provided reference genes

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