Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s1776 Capsella rubella HOM05D007874 ORTHO05D009614 5.6e-42 174.5 135 100.0
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 1.5e-26 123.2 137 54.7
AT1G70985 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 1.6e-25 119.8 136 58.8
AL2G30530 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 1.5e-23 113.2 130 66.9
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 3.0e-19 99.0 139 58.3
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 3.0e-19 99.0 141 55.3
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 6.7e-19 97.8 141 53.2
BcaB03g14857 Brassica carinata HOM05D007874 ORTHO05D009614 4.3e-18 95.1 140 68.6
BraA07t31296Z Brassica rapa HOM05D007874 ORTHO05D009614 4.3e-18 95.1 140 68.6
BolC6t39564H Brassica oleracea HOM05D007874 ORTHO05D009614 5.6e-18 94.7 140 67.9
A07p37380 Brassica napus HOM05D007874 ORTHO05D009614 7.4e-18 94.4 80 67.5
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 6.2e-17 91.3 140 54.3
C06p45060 Brassica napus HOM05D007874 ORTHO05D009614 1.4e-16 90.1 146 66.4
AL1G36620 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 6.2e-09 64.7 62 54.8
CARHR023430 Cardamine hirsuta HOM05D007874 ORTHO05D009614 8.2e-09 64.3 66 54.5
A09p41670 Brassica napus HOM05D007874 ORTHO05D009614 1.4e-08 63.5 71 49.3
BraA09t39656Z Brassica rapa HOM05D007874 ORTHO05D009614 1.4e-08 63.5 71 49.3
C02p28490 Brassica napus HOM05D009085 ORTHO05D010299 5.3e-08 61.6 114 56.1
BolC2t08890H Brassica oleracea HOM05D009085 ORTHO05D010299 5.3e-08 61.6 114 56.1
AT1G23050 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 1.5e-07 60.1 61 49.2
Thhalv10009563m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 2.0e-07 59.7 72 47.2
BcaC05g26216 Brassica carinata HOM05D007874 ORTHO05D009614 4.5e-07 58.5 71 46.5
C05p22280 Brassica napus HOM05D007874 ORTHO05D009614 4.5e-07 58.5 71 46.5
BolC5t30927H Brassica oleracea HOM05D007874 ORTHO05D009614 4.5e-07 58.5 71 46.5
Carub.0001s2257 Capsella rubella HOM05D007874 ORTHO05D009614 1.7e-06 56.6 61 50.8
Sp1g20500 Schrenkiella parvula HOM05D007874 ORTHO05D009614 2.9e-06 55.8 32 75.0
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 8.4e-06 54.3 57 50.9


User provided reference genes

Program Settings