Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 6.3e-98 360.9 202 100.0
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.4e-68 263.5 174 75.9
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.3e-62 241.9 161 77.0
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-56 223.8 170 68.8
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 4.6e-56 221.9 168 69.0
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 1.7e-55 219.9 162 70.4
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 1.7e-55 219.9 162 70.4
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 6.6e-55 218.0 161 68.9
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 2.1e-53 213.0 151 70.2
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 8.1e-53 211.1 161 68.3
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 8.1e-53 211.1 161 68.3
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 7.8e-48 194.5 153 62.7
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.3e-47 193.0 159 59.7
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.5e-46 190.3 161 58.4
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 4.7e-45 185.3 165 58.8
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 1.1e-44 184.1 161 57.8
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 1.4e-44 183.7 161 57.8
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 5.2e-44 181.8 157 58.6
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 5.2e-44 181.8 161 56.5
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-43 180.3 165 57.0
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-43 180.3 162 56.8
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 1.5e-43 180.3 162 56.8
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 2.6e-43 179.5 161 56.5
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 2.6e-43 179.5 161 56.5
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 4.2e-41 172.2 140 67.9
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 7.1e-41 171.4 148 56.8
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.6e-40 170.2 162 53.1
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 1.0e-39 167.5 154 54.5
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.1e-39 165.2 148 58.1
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 3.6e-37 159.1 158 56.3
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.8e-37 158.7 159 52.8
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.0e-36 154.5 155 50.3
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.3e-34 150.6 167 47.3
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.8e-34 149.1 115 61.7
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 1.1e-33 147.5 165 53.9
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.1e-33 147.5 119 59.7
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 4.6e-32 142.1 170 45.3
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 8.7e-31 137.9 165 49.7
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 8.7e-31 137.9 165 49.7
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 8.7e-31 137.9 165 49.7
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 8.7e-31 137.9 164 49.4
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.1e-30 137.5 149 49.0
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.5e-30 136.3 153 48.4
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 2.5e-30 136.3 188 44.1
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 3.3e-30 136.0 165 49.1
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 4.3e-30 135.6 157 48.4
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.6e-30 134.4 147 47.6
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 2.1e-29 133.3 163 47.2
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 2.1e-29 133.3 163 47.2
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 2.8e-29 132.9 165 48.5
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 2.4e-28 129.8 145 46.2
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 4.0e-28 129.0 113 56.6
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 4.0e-28 129.0 160 46.9
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 1.5e-27 127.1 117 53.0
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.8e-27 125.2 121 52.9
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 9.9e-27 124.4 141 49.6
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.8e-26 122.5 118 53.4
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 6.4e-26 121.7 152 43.4
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-25 120.6 169 43.8
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 9.3e-25 117.9 149 43.0
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 9.3e-25 117.9 149 43.0
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 1.2e-24 117.5 104 56.7
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.1e-24 116.7 70 77.1
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 3.5e-24 115.9 168 40.5
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 2.3e-23 113.2 156 41.7
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 6.2e-21 105.1 183 38.3
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 6.9e-20 101.7 116 55.2
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 9.0e-20 101.3 85 62.4
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 7.6e-19 98.2 118 42.4
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 8.7e-15 84.7 113 39.8
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-14 84.0 85 50.6
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 7.4e-14 81.6 69 56.5
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.1e-12 77.8 90 48.9
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.4e-12 76.6 57 59.6
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 4.1e-12 75.9 104 45.2
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 3.4e-11 72.8 100 41.0
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 9.3e-09 64.7 57 49.1
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 1.2e-08 64.3 54 57.4
A07p36780 Brassica napus HOM05D007954 ORTHO05D010124 1.1e-06 57.8 45 62.2


User provided reference genes

Program Settings