Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 4.8e-79 297.7 147 100.0
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.1e-43 180.3 138 73.9
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 6.7e-41 171.0 140 67.9
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 2.8e-39 165.6 138 64.5
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 2.8e-39 165.6 138 64.5
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 1.4e-38 163.3 145 61.4
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 1.4e-38 163.3 145 61.4
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 5.3e-38 161.4 137 65.0
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 1.3e-36 156.8 139 61.2
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-36 156.4 138 60.9
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-36 156.4 138 60.9
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 5.5e-35 151.4 132 60.6
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.7e-31 139.8 136 56.6
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.2e-31 137.5 137 55.5
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.3e-30 134.8 140 52.1
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.9e-29 131.3 124 55.6
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 5.9e-29 131.3 138 52.2
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 7.7e-29 131.0 145 51.0
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 7.7e-29 131.0 131 58.0
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 7.7e-29 131.0 145 51.0
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.3e-28 130.2 135 49.6
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 2.2e-28 129.4 123 55.3
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 2.9e-28 129.0 138 51.4
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 2.9e-28 129.0 136 53.7
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.0e-28 128.3 117 57.3
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 8.5e-28 127.5 115 56.5
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 8.5e-28 127.5 131 51.9
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 8.5e-28 127.5 131 51.9
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 1.5e-27 126.7 138 50.7
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.9e-27 126.3 139 50.4
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 1.9e-27 126.3 138 50.7
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 2.5e-27 125.9 123 52.8
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 4.2e-27 125.2 136 52.2
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 4.2e-27 125.2 136 52.2
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 5.5e-27 124.8 142 50.0
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 7.2e-27 124.4 132 50.8
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 7.2e-27 124.4 132 50.8
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 1.6e-26 123.2 142 49.3
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 1.6e-26 123.2 142 49.3
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 2.7e-26 122.5 142 49.3
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 2.3e-25 119.4 142 48.6
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 1.2e-24 117.1 136 50.0
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 5.7e-24 114.8 131 48.1
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 1.1e-22 110.5 145 46.9
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 4.1e-22 108.6 106 53.8
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 5.4e-22 108.2 129 46.5
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 9.1e-22 107.5 117 52.1
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 4.5e-21 105.1 121 43.8
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.3e-20 103.6 123 44.7
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.3e-20 102.8 123 43.9
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 5.5e-19 98.2 122 45.9
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 9.5e-19 97.4 107 52.3
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.6e-18 95.5 122 43.4
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 4.7e-18 95.1 71 71.8
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 6.1e-18 94.7 117 47.9
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 6.8e-17 91.3 127 41.7
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 8.9e-17 90.9 122 41.0
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 1.2e-16 90.5 88 60.2
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 7.5e-16 87.8 123 40.7
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 7.5e-16 87.8 123 40.7
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 1.7e-15 86.7 126 39.7
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 1.7e-15 86.7 133 38.3
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.8e-15 85.9 125 43.2
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 6.3e-15 84.7 81 60.5
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 8.3e-15 84.3 127 40.9
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 7.0e-14 81.3 114 41.2
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 9.2e-14 80.9 95 48.4
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 2.0e-13 79.7 116 37.9
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 2.0e-13 79.7 89 51.7
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.7e-12 76.6 85 52.9
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 2.9e-12 75.9 132 34.8
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.6e-10 70.1 82 45.1
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 3.1e-09 65.9 131 37.4
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 4.0e-09 65.5 69 52.2
C06p44000 Brassica napus HOM05D007954 ORTHO05D102319 1.3e-07 60.5 48 62.5
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.9e-07 59.3 58 51.7


User provided reference genes

Program Settings