Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s1314 Capsella rubella HOM05D007747 ORTHO05D009997 6.6e-40 166.8 76 100.0
Carub.0002s0802 Capsella rubella HOM05D007747 ORTHO05D009997 2.5e-23 111.7 76 68.4
AL5G21430 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 5.2e-21 104.0 77 64.9
AL5G21440 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 1.5e-20 102.4 78 62.8
AL2G27660 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 1.3e-19 99.4 76 57.9
AT3G43505 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 6.4e-19 97.1 78 60.3
Thhalv10003401m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 9.2e-18 93.2 76 56.6
Carub.0005s0920 Capsella rubella HOM05D007747 ORTHO05D009997 1.5e-15 85.9 66 57.6
CARHR171480 Cardamine hirsuta HOM05D007747 ORTHO05D009997 2.5e-15 85.1 57 57.9
Thhalv10029330m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 4.3e-15 84.3 75 52.0
A04p01260 Brassica napus HOM05D007747 ORTHO05D028248 1.4e-13 79.3 81 46.9
BraA04t15845Z Brassica rapa HOM05D007747 ORTHO05D028248 1.4e-13 79.3 81 46.9
C08p36030 Brassica napus HOM05D007747 ORTHO05D009997 2.4e-13 78.6 73 47.9
Sp5g02207 Schrenkiella parvula HOM05D007747 ORTHO05D009997 2.4e-13 78.6 75 49.3
BcaC07g40620 Brassica carinata HOM05D007747 ORTHO05D009997 3.1e-13 78.2 73 47.9
BolC4t24705H Brassica oleracea HOM05D007747 ORTHO05D009997 3.1e-13 78.2 76 47.4
C04p31610 Brassica napus HOM05D007747 ORTHO05D028248 5.2e-13 77.4 81 45.7
BolC4t24708H Brassica oleracea HOM05D007747 ORTHO05D028248 5.2e-13 77.4 81 45.7
A07p25360 Brassica napus HOM05D007747 ORTHO05D009997 1.5e-12 75.9 78 48.7
A09p53230 Brassica napus HOM05D007747 ORTHO05D009997 1.5e-12 75.9 73 46.6
BraA07t30181Z Brassica rapa HOM05D007747 ORTHO05D009997 1.5e-12 75.9 78 48.7
A04p01250 Brassica napus HOM05D007747 ORTHO05D009997 2.6e-12 75.1 76 46.1
BraA04t15844Z Brassica rapa HOM05D007747 ORTHO05D009997 2.6e-12 75.1 76 46.1
BcaC08g45110 Brassica carinata HOM05D007747 ORTHO05D009997 7.6e-12 73.6 78 48.7
C06p27200 Brassica napus HOM05D007747 ORTHO05D009997 7.6e-12 73.6 78 48.7
Carub.0001s3631 Capsella rubella HOM05D007747 ORTHO05D014853 1.7e-11 72.4 77 53.2
BraA07t30680Z Brassica rapa HOM05D007747 ORTHO05D009997 6.4e-11 70.5 78 43.6
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 1.4e-10 69.3 76 42.1
AT3G61175 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 2.4e-10 68.6 82 47.6
A07p30430 Brassica napus HOM05D007747 ORTHO05D009997 2.4e-10 68.6 78 42.3
AT3G20993 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 4.1e-10 67.8 77 46.8
A05p05960 Brassica napus HOM05D007747 ORTHO05D009997 7.1e-10 67.0 78 43.6
BraA05t19559Z Brassica rapa HOM05D007747 ORTHO05D009997 7.1e-10 67.0 78 43.6
A07p18970 Brassica napus HOM05D007747 ORTHO05D024130 9.2e-10 66.6 85 43.5
BraA07t29602Z Brassica rapa HOM05D007747 ORTHO05D024130 9.2e-10 66.6 85 43.5
AT3G61177 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 1.6e-09 65.9 80 43.8
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 2.1e-09 65.5 80 45.0
AT3G20997 Arabidopsis thaliana HOM05D007747 ORTHO05D009997 3.5e-09 64.7 76 44.7
BcaB02g08951 Brassica carinata HOM05D007747 ORTHO05D009997 4.6e-09 64.3 78 42.3
BolC4t23792H Brassica oleracea HOM05D007747 ORTHO05D024130 4.6e-09 64.3 85 42.4
AL807U10010 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 6.0e-09 63.9 76 44.7
Carub.0002s0801 Capsella rubella HOM05D007747 ORTHO05D009997 6.0e-09 63.9 49 67.3
C06p27230 Brassica napus HOM05D007747 ORTHO05D009997 1.0e-08 63.2 70 47.1
BolC4t22310H Brassica oleracea HOM05D007747 ORTHO05D009997 1.0e-08 63.2 78 42.3
AL5G43440 Arabidopsis lyrata HOM05D007747 ORTHO05D014853 2.3e-08 62.0 75 44.0
AT1G49435 Arabidopsis thaliana HOM05D007747 ORTHO05D081092 2.3e-08 62.0 75 45.3
C04p22980 Brassica napus HOM05D007747 ORTHO05D024130 2.3e-08 62.0 85 41.2
C06p27260 Brassica napus HOM05D007747 ORTHO05D009997 2.3e-08 62.0 76 44.7
BolC6t37896H Brassica oleracea HOM05D007747 ORTHO05D009997 3.0e-08 61.6 76 44.7
Carub.0230s0002 Capsella rubella HOM05D007747 ORTHO05D009997 3.0e-08 61.6 78 42.3
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 3.0e-08 61.6 75 40.0
Thhalv10006351m.g Eutrema salsugineum HOM05D007747 ORTHO05D009997 3.0e-08 61.6 80 42.5
AT3G61182 Arabidopsis thaliana HOM05D007747 ORTHO05D014853 3.9e-08 61.2 75 42.7
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 5.1e-08 60.8 78 35.9
C06p27240 Brassica napus HOM05D007747 ORTHO05D009997 8.7e-08 60.1 76 44.7
C06p27210 Brassica napus HOM05D007747 ORTHO05D009997 1.1e-07 59.7 76 44.7
C06p27220 Brassica napus HOM05D007747 ORTHO05D009997 1.1e-07 59.7 76 44.7
BcaB03g15568 Brassica carinata HOM05D007747 ORTHO05D009997 1.9e-07 58.9 80 41.2
BcaB06g29617 Brassica carinata HOM05D016272 ORTHO05D014853 1.9e-07 58.9 76 39.5
A07p25370 Brassica napus HOM05D007747 ORTHO05D009997 1.9e-07 58.9 76 44.7
A07p25380 Brassica napus HOM05D007747 ORTHO05D009997 1.9e-07 58.9 76 44.7
BraA07t30182Z Brassica rapa HOM05D007747 ORTHO05D009997 1.9e-07 58.9 76 44.7
Carub.0005s2785 Capsella rubella HOM05D007747 ORTHO05D014853 3.3e-07 58.2 74 41.9
C06p27250 Brassica napus HOM05D007747 ORTHO05D009997 4.3e-07 57.8 76 43.4
BolC6t37892H Brassica oleracea HOM05D007747 ORTHO05D009997 4.3e-07 57.8 76 46.1
BolC8t51184H Brassica oleracea HOM05D007747 ORTHO05D009997 4.3e-07 57.8 59 40.7
AL8G18250 Arabidopsis lyrata HOM05D007747 ORTHO05D023629 9.6e-07 56.6 80 40.0
AL8G18260 Arabidopsis lyrata HOM05D007747 ORTHO05D023629 9.6e-07 56.6 80 40.0
BraA07t30180Z Brassica rapa HOM05D007747 ORTHO05D009997 9.6e-07 56.6 76 43.4
A07p30900 Brassica napus HOM05D007747 ORTHO05D009997 1.2e-06 56.2 75 38.7
C06p35890 Brassica napus HOM05D007747 ORTHO05D009997 2.8e-06 55.1 75 38.7
BraA07t30726Z Brassica rapa HOM05D007747 ORTHO05D009997 2.8e-06 55.1 75 38.7
BcaC08g45800 Brassica carinata HOM05D007747 ORTHO05D009997 3.6e-06 54.7 75 38.7


User provided reference genes

Program Settings