Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0973 Capsella rubella HOM05D008131 ORTHO05D010989 1.1e-53 213.0 108 100.0
Carub.0003s0078 Capsella rubella HOM05D008131 ORTHO05D010989 2.6e-21 105.5 104 51.9
AL3G10890 Arabidopsis lyrata HOM05D008131 ORTHO05D010989 4.4e-21 104.8 104 51.9
AT3G01325 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 1.3e-20 103.2 104 51.9
AT3G01331 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 4.8e-20 101.3 102 51.0
CARHR068640 Cardamine hirsuta HOM05D008131 ORTHO05D010989 2.4e-19 99.0 100 52.0
CARHR075660 Cardamine hirsuta HOM05D008131 ORTHO05D010989 5.0e-17 91.3 106 46.2
Thhalv10017866m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 8.5e-17 90.5 83 54.2
AL3G10900 Arabidopsis lyrata HOM05D008131 ORTHO05D010989 1.1e-16 90.1 85 56.5
BraA05t23190Z Brassica rapa HOM05D008131 ORTHO05D010989 5.5e-16 87.8 95 47.4
BcaC05g30404 Brassica carinata HOM05D008131 ORTHO05D010989 3.6e-15 85.1 95 45.3
Carub.0003s0079 Capsella rubella HOM05D008131 ORTHO05D010989 6.7e-14 80.9 95 47.4
Carub.0003s2828 Capsella rubella HOM05D008131 ORTHO05D010989 6.7e-14 80.9 105 44.8
BcaC05g30405 Brassica carinata HOM05D008131 ORTHO05D010989 1.5e-13 79.7 95 45.3
BcaC05g30471 Brassica carinata HOM05D008131 ORTHO05D010989 2.6e-13 79.0 95 45.3
BcaC05g30472 Brassica carinata HOM05D008131 ORTHO05D010989 2.6e-13 79.0 95 45.3
BcaC05g30473 Brassica carinata HOM05D008131 ORTHO05D010989 2.6e-13 79.0 95 45.3
A05p44670 Brassica napus HOM05D008131 ORTHO05D010989 2.6e-13 79.0 95 45.3
C06p44630 Brassica napus HOM05D008131 ORTHO05D015509 4.8e-12 74.7 98 43.9
Thhalv10006373m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 4.8e-12 74.7 97 46.4
C06p44640 Brassica napus HOM05D008131 ORTHO05D015509 6.3e-12 74.3 98 43.9
AT3G27425 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 8.2e-12 73.9 95 46.3
BolC6t39529H Brassica oleracea HOM05D008131 ORTHO05D015509 8.2e-12 73.9 98 43.9
Thhalv10017888m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 8.2e-12 73.9 97 50.5
BolC5t35139H Brassica oleracea HOM05D008131 ORTHO05D010989 1.8e-11 72.8 83 43.4
C06p44680 Brassica napus HOM05D008131 ORTHO05D015509 2.4e-11 72.4 95 43.2
BraA07t31270Z Brassica rapa HOM05D008131 ORTHO05D015509 3.1e-11 72.0 95 44.2
AT3G01324 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 4.1e-11 71.6 95 44.2
A07p37080 Brassica napus HOM05D008131 ORTHO05D015509 4.1e-11 71.6 95 44.2
BcaNung03234 Brassica carinata HOM05D008131 ORTHO05D010989 5.3e-11 71.2 95 43.2
BraA01t04660Z Brassica rapa HOM05D008131 ORTHO05D010989 7.0e-11 70.9 96 43.8
Thhalv10017595m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 7.0e-11 70.9 95 46.3
BolC1t05952H Brassica oleracea HOM05D008131 ORTHO05D010989 9.1e-11 70.5 96 45.8
BolC6t39528H Brassica oleracea HOM05D008131 ORTHO05D015509 9.1e-11 70.5 97 43.3
BNapus_Darmor_BZH_scaffold_133p00090 Brassica napus HOM05D008131 ORTHO05D010989 1.2e-10 70.1 96 43.8
BcaC02g12435 Brassica carinata HOM05D008131 ORTHO05D010989 2.6e-10 68.9 95 44.2
BNapus_Darmor_BZH_scaffold_119p00090 Brassica napus HOM05D008131 ORTHO05D010989 2.6e-10 68.9 96 42.7
BNapus_Darmor_BZH_scaffold_97p00350 Brassica napus HOM05D008131 ORTHO05D010989 2.6e-10 68.9 96 42.7
C04p03690 Brassica napus HOM05D008131 ORTHO05D010989 2.6e-10 68.9 95 44.2
A05p03050 Brassica napus HOM05D008131 ORTHO05D010989 3.5e-10 68.6 95 44.2
C06p44650 Brassica napus HOM05D008131 ORTHO05D015509 3.5e-10 68.6 92 43.5
BolC4t22002H Brassica oleracea HOM05D008131 ORTHO05D010989 3.5e-10 68.6 95 44.2
BraA05t19296Z Brassica rapa HOM05D008131 ORTHO05D010989 3.5e-10 68.6 95 44.2
C09p75250 Brassica napus HOM05D008131 ORTHO05D010989 7.7e-10 67.4 109 33.0
Carub.0003s0077 Capsella rubella HOM05D008131 ORTHO05D114443 2.2e-09 65.9 72 43.1
AT3G01329 Arabidopsis thaliana HOM05D008131 ORTHO05D010989 2.9e-09 65.5 95 42.1
BcaB03g14831 Brassica carinata HOM05D008131 ORTHO05D015509 6.5e-09 64.3 87 42.5
Sp3g00750 Schrenkiella parvula HOM05D008131 ORTHO05D010989 1.5e-08 63.2 105 38.1
CARHR026580 Cardamine hirsuta HOM05D008131 ORTHO05D010989 1.9e-08 62.8 95 36.8
Thhalv10026915m.g Eutrema salsugineum HOM05D008131 ORTHO05D014435 9.4e-08 60.5 97 43.3
AT3G01322 Arabidopsis thaliana HOM05D008131 ORTHO05D014435 2.7e-07 58.9 98 36.7
CARHR075670 Cardamine hirsuta HOM05D008131 ORTHO05D014435 4.7e-07 58.2 98 37.8
AT3G01323 Arabidopsis thaliana HOM05D008131 ORTHO05D014435 6.1e-07 57.8 103 41.7
Carub.0005s0579 Capsella rubella HOM05D008131 ORTHO05D010989 1.8e-06 56.2 97 35.1
AT3G01327 Arabidopsis thaliana HOM05D008131 ORTHO05D014435 2.3e-06 55.8 98 40.8
AL5G16790 Arabidopsis lyrata HOM05D008131 ORTHO05D010989 4.0e-06 55.1 75 45.3


User provided reference genes

Program Settings