Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0951 Capsella rubella HOM05D008724 ORTHO05D010319 2.3e-32 142.1 101 100.0
CARHR055510 Cardamine hirsuta HOM05D008724 ORTHO05D010319 3.9e-16 88.2 59 93.2
AT1G54410 Arabidopsis thaliana HOM05D008724 ORTHO05D010319 8.8e-16 87.0 61 83.6
AL1G64750 Arabidopsis lyrata HOM05D008724 ORTHO05D010319 1.5e-15 86.3 61 82.0
Thhalv10023775m.g Eutrema salsugineum HOM05D008724 ORTHO05D010319 1.0e-11 73.6 104 68.3
BcaC01g03200 Brassica carinata HOM05D008724 ORTHO05D010319 9.4e-10 67.0 65 75.4
BolC3t17769H Brassica oleracea HOM05D008724 ORTHO05D010319 9.4e-10 67.0 65 75.4
C03p54770 Brassica napus HOM05D008724 ORTHO05D010319 1.2e-09 66.6 106 64.2
Atru.chr2.1468 Acer truncatum HOM05D008724 ORTHO05D010319 2.1e-09 65.9 68 63.2
Medtr6g027810 Medicago truncatula HOM05D008724 ORTHO05D010319 1.8e-08 62.8 65 70.8
CAN.G1392.5 Capsicum annuum HOM05D008724 ORTHO05D010319 3.0e-08 62.0 71 52.1
Nitab4.5_0000098g0110 Nicotiana tabacum HOM05D008724 ORTHO05D010319 6.7e-08 60.8 108 60.2
TAR623G1375 Trochodendron aralioides HOM05D040635 ORTHO05D010319 8.8e-08 60.5 102 60.8
HanXRQChr01g0026421 Helianthus annuus HOM05D008724 ORTHO05D010319 1.1e-07 60.1 74 58.1
Nitab4.5_0001606g0070 Nicotiana tabacum HOM05D008724 ORTHO05D010319 2.0e-07 59.3 69 62.3
TAR623G0877 Trochodendron aralioides HOM05D040635 ORTHO05D010319 2.6e-07 58.9 102 59.8
Psat1g089720 Pisum sativum HOM05D008724 ORTHO05D010319 5.7e-07 57.8 56 66.1
TPR.G29874 Trifolium pratense HOM05D008724 ORTHO05D010319 5.7e-07 57.8 70 64.3
Aa31LG2G1870 Aethionema arabicum HOM05D008724 ORTHO05D010319 1.3e-06 56.6 101 61.4
Cc06_g20920 Coffea canephora HOM05D008724 ORTHO05D010319 2.2e-06 55.8 68 45.6
Thecc.05G244500 Theobroma cacao HOM05D008724 ORTHO05D010319 2.2e-06 55.8 60 48.3
Aqoxy2G00593 Aquilegia oxysepala HOM05D040635 ORTHO05D010319 6.3e-06 54.3 65 52.3


User provided reference genes

Program Settings