Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 0.0e+00 1295.4 666 100.0
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 1.0e-274 949.9 733 70.9
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 9.5e-260 900.2 749 67.4
Carub.0004s1788 Capsella rubella HOM05D009492 ORTHO05D011693 9.9e-249 863.6 733 66.7
Carub.0008s0741 Capsella rubella HOM05D009492 ORTHO05D011693 6.0e-246 854.4 703 70.3
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-241 840.1 663 70.4
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 1.0e-237 827.0 613 73.7
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 8.1e-219 764.2 737 61.5
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 2.5e-212 742.7 734 60.2
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-189 667.2 672 59.1
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 4.5e-185 652.1 705 56.2
Carub.0004s0637 Capsella rubella HOM05D009492 ORTHO05D011693 7.2e-183 644.8 622 61.7
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-182 643.7 677 58.3
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-166 590.5 632 54.3
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 2.6e-148 530.0 492 62.6
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-114 417.9 722 40.6
Carub.0008s0719 Capsella rubella HOM05D009492 ORTHO05D011693 2.7e-113 413.7 710 41.7
Carub.0003s2830 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-109 401.7 538 47.2
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 3.1e-93 347.1 648 36.6
Carub.0002s0970 Capsella rubella HOM05D009492 ORTHO05D011693 1.3e-91 341.7 596 41.1
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 9.4e-90 335.5 664 36.0
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 4.5e-76 290.0 638 33.7
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 6.7e-72 276.2 584 34.6
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 7.5e-63 246.1 561 32.6
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 8.8e-56 222.6 609 31.2
AT2G15110 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.2e-52 212.2 598 31.8
Carub.0014s0006 Capsella rubella HOM05D009492 ORTHO05D011693 2.0e-44 184.9 239 46.4
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.6e-31 141.4 663 26.7
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.9e-30 137.1 669 26.6
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.9e-29 135.2 636 24.4
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.1e-28 131.7 476 29.0
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.7e-28 131.3 203 36.9
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.0e-28 130.2 203 36.9
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.9e-27 127.5 195 35.4
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.6e-27 126.7 228 34.2
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-26 125.6 228 33.8
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.3e-26 123.2 689 24.5
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-25 121.3 655 24.3
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-25 121.3 655 24.4
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.7e-25 120.6 669 24.7
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.1e-25 119.8 707 24.2
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-24 119.0 655 23.8
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.8e-24 118.6 225 32.0
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.8e-24 118.6 190 33.2
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.2e-24 117.1 654 23.7
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 9.9e-23 112.8 346 30.1
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.1e-21 109.4 685 25.1
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.7e-20 104.8 228 31.1
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 2.7e-20 104.8 601 24.1
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-19 100.9 172 32.6
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 4.3e-18 97.4 165 31.5
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-17 95.9 626 23.6
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 4.7e-17 94.0 203 29.6
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-16 92.8 168 31.5
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-16 92.0 205 31.2
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 6.8e-16 90.1 166 31.9
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.2e-15 89.4 179 31.8
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-15 88.6 166 30.1
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.9e-15 86.3 317 25.9
CARHR184520 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.3e-14 85.9 132 31.8
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-14 85.1 160 29.4
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-14 84.3 158 29.7
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-14 84.0 169 30.2
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 8.4e-14 83.2 166 30.1
Carub.0108s0001 Capsella rubella HOM05D016834 ORTHO05D016863 8.4e-14 83.2 674 23.4
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-13 82.0 165 30.3
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-13 81.6 202 31.7
AT3G43148 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.2e-13 81.3 77 51.9
AT4G06688 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 7.1e-13 80.1 347 27.4
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 9.2e-13 79.7 489 24.1
AL5G19630 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-12 79.3 675 22.8
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-12 79.0 116 34.5
AL8G10170 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.1e-12 78.6 326 26.4
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-12 77.8 455 23.1
Carub.0008s1221 Capsella rubella HOM05D016834 ORTHO05D016863 4.6e-12 77.4 672 23.2
AT1G36100 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.3e-11 75.1 89 42.7
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-11 75.1 163 30.1
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 2.3e-11 75.1 142 31.7
AT2G11010 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.6e-11 73.6 212 25.5
AT3G30230 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.6e-11 73.6 75 48.0
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-11 73.6 516 23.4
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 8.7e-11 73.2 282 24.8
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-10 72.0 135 33.3
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 2.5e-10 71.6 157 28.0
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-10 71.6 273 27.5
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 3.3e-10 71.2 290 25.2
AT5G38190 Arabidopsis thaliana HOM05D034490 ORTHO05D019745 4.3e-10 70.9 137 29.9
AT1G32010 Arabidopsis thaliana HOM05D010629 ORTHO05D019745 7.3e-10 70.1 129 29.5
CARHR053560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 7.3e-10 70.1 103 32.0
Sp7g05200 Schrenkiella parvula HOM05D002078 ORTHO05D005680 7.3e-10 70.1 138 29.0
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 2.1e-09 68.6 147 32.7
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 2.8e-09 68.2 147 32.0
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 2.8e-09 68.2 135 29.6
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 3.6e-09 67.8 166 26.5
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 3.6e-09 67.8 147 32.0
CARHR118560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 3.6e-09 67.8 71 39.4
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 2.4e-08 65.1 146 31.5
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 5.3e-08 63.9 146 30.8
BcaB06g27178 Brassica carinata HOM05D002078 ORTHO05D005680 1.2e-07 62.8 120 31.7
BcaC06g34587 Brassica carinata HOM05D002078 ORTHO05D005680 2.0e-07 62.0 165 27.9
Carub.0003s2394 Capsella rubella HOM05D016834 ORTHO05D016863 2.0e-07 62.0 675 22.5
Carub.0009s0003 Capsella rubella HOM05D016834 ORTHO05D016863 2.0e-07 62.0 670 22.2
BcaB05g24965 Brassica carinata HOM05D002078 ORTHO05D005680 2.6e-07 61.6 120 30.8
Carub.0005s0837 Capsella rubella HOM05D010629 ORTHO05D005680 3.4e-07 61.2 132 26.5
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 4.4e-07 60.8 181 25.4
BolC5t33453H Brassica oleracea HOM05D003421 ORTHO05D003268 5.8e-07 60.5 178 24.2
CARHR035710 Cardamine hirsuta HOM05D008458 ORTHO05D010628 5.8e-07 60.5 120 30.0
CARHR105800 Cardamine hirsuta HOM05D008458 ORTHO05D010628 7.6e-07 60.1 71 36.6
Carub.0073s0002 Capsella rubella HOM05D016834 ORTHO05D016863 9.9e-07 59.7 246 27.6
CARHR119450 Cardamine hirsuta HOM05D006121 ORTHO05D043487 9.9e-07 59.7 85 40.0
AL3G43600 Arabidopsis lyrata HOM05D010629 ORTHO05D005680 1.7e-06 58.9 137 28.5
BcaB07g33910 Brassica carinata HOM05D002078 ORTHO05D005680 2.9e-06 58.2 293 22.9
BcaC02g11611 Brassica carinata HOM05D002078 ORTHO05D005680 2.9e-06 58.2 120 30.0
BolC1t03345H Brassica oleracea HOM05D003421 ORTHO05D003268 3.8e-06 57.8 81 34.6
Carub.0072s0001 Capsella rubella HOM05D010629 ORTHO05D005680 3.8e-06 57.8 118 28.0
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-06 57.4 112 30.4
Carub.0007s3050 Capsella rubella HOM05D010629 ORTHO05D005680 4.9e-06 57.4 118 28.0
CARHR150680 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.9e-06 57.4 54 46.3


User provided reference genes

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