Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0908 Capsella rubella HOM05D010242 ORTHO05D010706 1.5e-36 155.6 76 100.0
AT3G03826 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 2.3e-16 88.6 76 55.3
Thhalv10023074m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 2.5e-15 85.1 77 53.2
AL3G13690 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 2.4e-13 78.6 70 55.7
Carub.0007s3156 Capsella rubella HOM05D010242 ORTHO05D010706 8.9e-13 76.6 78 53.8
Thhalv10027499m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 7.6e-12 73.6 79 48.1
Thhalv10022409m.g Eutrema salsugineum HOM05D010103 ORTHO05D010706 1.7e-11 72.4 78 48.7
A07p20010 Brassica napus HOM05D014409 ORTHO05D010706 4.9e-11 70.9 71 47.9
BraA07t29699Z Brassica rapa HOM05D014409 ORTHO05D010706 4.9e-11 70.9 71 47.9
Carub.0003s0301 Capsella rubella HOM05D010242 ORTHO05D010706 4.9e-11 70.9 78 50.0
C06p18550 Brassica napus HOM05D014409 ORTHO05D010706 1.1e-10 69.7 71 46.5
CARHR077920 Cardamine hirsuta HOM05D010242 ORTHO05D010706 2.4e-10 68.6 76 44.7
A01p16770 Brassica napus HOM05D014409 ORTHO05D010706 3.2e-10 68.2 71 46.5
BraA01t01630Z Brassica rapa HOM05D014409 ORTHO05D010706 3.2e-10 68.2 71 46.5
BcaB04g19353 Brassica carinata HOM05D010242 ORTHO05D010706 9.2e-10 66.6 71 46.5
AL3G13700 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 1.2e-09 66.2 76 47.4
AT5G43695 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 2.7e-09 65.1 76 47.4
AT2G04622 Arabidopsis thaliana HOM05D010242 ORTHO05D031466 6.0e-09 63.9 76 44.7
BcaC01g04389 Brassica carinata HOM05D010242 ORTHO05D010706 6.0e-09 63.9 71 43.7
A03p33450 Brassica napus HOM05D010242 ORTHO05D010706 6.0e-09 63.9 71 43.7
C03p40650 Brassica napus HOM05D010242 ORTHO05D010706 6.0e-09 63.9 71 43.7
BraA03t12520Z Brassica rapa HOM05D010242 ORTHO05D010706 6.0e-09 63.9 71 43.7
AT3G03828 Arabidopsis thaliana HOM05D010242 ORTHO05D010706 5.1e-08 60.8 77 46.8
Carub.0003s0302 Capsella rubella HOM05D010242 ORTHO05D010706 6.6e-08 60.5 81 43.2
C05p63150 Brassica napus HOM05D010103 ORTHO05D010706 1.1e-07 59.7 77 42.9
BolC6t37068H Brassica oleracea HOM05D014409 ORTHO05D010706 1.1e-07 59.7 52 55.8
AL8G16630 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 1.5e-07 59.3 59 47.5
AL8G16490 Arabidopsis lyrata HOM05D010242 ORTHO05D010706 1.9e-07 58.9 69 46.4
BolC5t34977H Brassica oleracea HOM05D010103 ORTHO05D010706 9.6e-07 56.6 73 39.7
A05p43560 Brassica napus HOM05D010103 ORTHO05D010706 1.2e-06 56.2 77 41.6
BraA05t23096Z Brassica rapa HOM05D010103 ORTHO05D010706 1.2e-06 56.2 77 41.6
A05p43550 Brassica napus HOM05D010103 ORTHO05D010706 1.6e-06 55.8 75 40.0
C05p63140 Brassica napus HOM05D010103 ORTHO05D010706 1.6e-06 55.8 75 40.0
BolC5t34976H Brassica oleracea HOM05D010103 ORTHO05D010706 1.6e-06 55.8 75 40.0
BraA05t23095Z Brassica rapa HOM05D010103 ORTHO05D010706 1.6e-06 55.8 75 40.0
Thhalv10022965m.g Eutrema salsugineum HOM05D010242 ORTHO05D010706 8.1e-06 53.5 77 44.2


User provided reference genes

Program Settings