Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0714 Capsella rubella HOM05D010069 ORTHO05D011961 1.1e-37 159.5 77 100.0
Carub.0002s0715 Capsella rubella HOM05D010069 ORTHO05D011961 1.1e-37 159.5 77 100.0
Carub.0002s0717 Capsella rubella HOM05D010069 ORTHO05D011961 1.1e-37 159.5 77 100.0
Carub.0002s0716 Capsella rubella HOM05D010069 ORTHO05D011961 1.3e-35 152.5 77 96.1
AL2G15970 Arabidopsis lyrata HOM05D010069 ORTHO05D011961 2.2e-19 98.6 75 64.0
Thhalv10023902m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 3.9e-16 87.8 75 58.7
Thhalv10003039m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 1.3e-14 82.8 86 51.2
AL4G28300 Arabidopsis lyrata HOM05D010069 ORTHO05D011961 2.2e-14 82.0 75 56.0
Thhalv10002825m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 4.8e-14 80.9 86 50.0
AT2G32835 Arabidopsis thaliana HOM05D010069 ORTHO05D011961 1.4e-13 79.3 75 53.3
Thhalv10012096m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 1.4e-13 79.3 72 55.6
Thhalv10024045m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 1.8e-13 79.0 72 54.2
Thhalv10023965m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 3.1e-13 78.2 72 55.6
AT1G60815 Arabidopsis thaliana HOM05D010069 ORTHO05D011961 4.1e-13 77.8 75 53.3
Sp2g04110 Schrenkiella parvula HOM05D010069 ORTHO05D011961 4.1e-13 77.8 75 54.7
AT1G60625 Arabidopsis thaliana HOM05D010069 ORTHO05D011961 6.9e-13 77.0 74 54.1
Thhalv10011947m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 1.2e-12 76.3 74 51.4
Thhalv10012049m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 1.5e-12 75.9 74 51.4
AT1G60913 Arabidopsis thaliana HOM05D010069 ORTHO05D011961 2.0e-12 75.5 77 54.5
AL2G17150 Arabidopsis lyrata HOM05D010069 ORTHO05D011961 2.6e-12 75.1 76 52.6
Carub.0002s0682 Capsella rubella HOM05D010069 ORTHO05D011961 2.2e-11 72.0 72 47.2
Thhalv10012132m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 2.5e-10 68.6 42 69.0
Thhalv10012318m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 2.5e-10 68.6 42 69.0
Prupe.3G207900 Prunus persica HOM05D009824 ORTHO05D012089 8.8e-08 60.1 74 36.5
Thhalv10017890m.g Eutrema salsugineum HOM05D010069 ORTHO05D011961 4.4e-07 57.8 81 40.7
TPR.G6486 Trifolium pratense HOM05D009824 ORTHO05D012089 1.3e-06 56.2 60 41.7
ClCG03G017300 Citrullus lanatus HOM05D009824 ORTHO05D010344 4.8e-06 54.3 72 36.1


User provided reference genes

Program Settings