Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 5.3e-173 610.9 305 100.0
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 3.7e-166 588.2 305 96.1
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 3.1e-165 585.1 305 96.4
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 9.3e-162 573.5 305 92.8
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.0e-160 568.5 305 93.1
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.5e-159 566.2 305 91.8
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 2.5e-159 565.5 305 90.8
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 5.7e-159 564.3 301 91.7
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.5e-156 556.2 301 91.0
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.5e-156 556.2 301 91.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 7.7e-156 553.9 301 90.7
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.8e-155 551.6 301 89.7
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 8.5e-155 550.4 301 89.7
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 8.8e-144 513.8 302 84.1
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 4.5e-132 474.9 302 77.8
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 4.2e-130 468.4 302 77.2
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.0e-128 463.8 302 77.5
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.4e-128 463.4 299 77.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.3e-128 462.6 300 76.3
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 2.3e-128 462.6 300 77.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 2.3e-128 462.6 300 74.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 4.0e-128 461.8 307 74.3
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 5.2e-128 461.5 302 74.5
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 6.8e-128 461.1 306 76.5
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 8.8e-128 460.7 306 73.5
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 2.0e-127 459.5 302 76.8
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 5.7e-127 458.0 302 76.5
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 7.5e-127 457.6 302 76.5
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 9.8e-127 457.2 302 75.5
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 2.8e-126 455.7 299 75.9
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.7e-126 455.3 300 76.3
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 3.7e-126 455.3 302 74.8
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 4.8e-126 454.9 300 73.3
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 6.3e-126 454.5 300 76.7
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 6.3e-126 454.5 306 72.5
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 8.3e-126 454.1 300 76.7
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 8.3e-126 454.1 300 76.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 1.1e-125 453.8 306 72.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.1e-125 453.8 300 76.0
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.8e-125 453.0 306 74.2
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.8e-125 453.0 300 73.0
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 2.4e-125 452.6 306 72.2
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 5.4e-125 451.4 302 75.2
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.2e-124 450.3 300 76.0
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 5.9e-124 448.0 304 73.0
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 1.7e-123 446.4 306 73.2
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.2e-123 446.0 300 74.0
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 2.9e-123 445.7 306 73.2
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 5.0e-123 444.9 300 74.0
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 5.0e-123 444.9 306 72.5
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 5.0e-123 444.9 306 72.5
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.5e-123 444.1 302 73.2
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 8.5e-123 444.1 300 75.0
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.5e-122 443.4 306 72.2
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.5e-122 443.4 298 74.8
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.6e-121 439.9 300 73.3
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.6e-121 439.9 300 73.0
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.7e-121 439.1 304 71.7
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 3.6e-121 438.7 300 73.0
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 4.7e-121 438.3 300 71.7
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 8.0e-121 437.6 304 71.4
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.0e-120 437.2 302 72.8
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.0e-120 437.2 303 72.6
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.8e-120 436.4 306 72.5
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 1.8e-120 436.4 306 72.2
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 3.0e-120 435.6 306 72.2
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 4.0e-120 435.3 304 71.4
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 6.8e-120 434.5 298 72.5
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 6.8e-120 434.5 298 72.5
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 6.8e-120 434.5 300 72.7
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 6.8e-120 434.5 306 70.9
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 6.8e-120 434.5 304 71.4
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 8.8e-120 434.1 303 72.3
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.5e-119 433.3 303 71.6
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 1.5e-119 433.3 306 71.6
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 2.6e-119 432.6 285 77.2
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 3.4e-119 432.2 306 71.6
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 7.5e-119 431.0 300 72.3
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 6.3e-118 427.9 300 70.0
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.9e-116 421.4 296 71.6
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 7.7e-116 421.0 291 75.3
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.5e-114 416.8 300 69.0
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 3.3e-106 389.0 264 75.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 8.0e-105 384.4 304 64.5
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.4e-104 383.6 294 64.3
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.8e-104 383.3 304 63.5
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.4e-101 373.6 300 62.0
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 3.2e-101 372.5 309 62.1
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 5.4e-101 371.7 286 65.7
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 7.0e-101 371.3 248 76.6
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.6e-100 368.6 300 62.7
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.7e-97 358.6 305 65.9
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.3e-96 356.3 268 67.2
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.7e-92 342.8 244 69.3
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 6.2e-89 331.6 300 56.3
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 6.4e-86 321.6 291 59.5
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 5.4e-85 318.5 232 69.0
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 7.8e-84 314.7 273 60.4
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.9e-83 312.4 287 55.7
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.8e-81 306.2 265 61.5
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 4.4e-79 298.9 222 68.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 7.6e-79 298.1 300 51.7
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 3.5e-76 289.3 305 49.8
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-75 287.0 196 73.0
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 2.4e-69 266.5 302 48.0
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 7.1e-69 265.0 202 65.8
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.2e-60 237.7 216 60.2
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 6.7e-59 231.9 318 40.6
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 6.0e-52 208.8 123 82.1
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 7.4e-50 201.8 268 49.3
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.3e-49 198.7 145 71.0
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-48 197.6 145 69.7
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.4e-47 193.0 145 69.0
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 5.9e-47 192.2 318 38.4
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 5.9e-47 192.2 295 43.7
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 8.2e-41 171.8 166 51.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.8e-40 170.6 145 64.1
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 5.5e-37 159.1 370 31.9
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.3e-34 149.8 91 76.9
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 7.2e-29 132.1 340 29.7
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.0e-27 128.3 290 31.4
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.0e-23 114.0 76 71.1
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.9e-13 80.9 43 86.0


User provided reference genes

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