Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0119 Capsella rubella HOM05D004282 ORTHO05D006804 0.0e+00 1080.5 535 100.0
AT1G63660 Arabidopsis thaliana HOM05D004282 ORTHO05D006804 5.2e-309 1063.5 535 97.9
AL2G11570 Arabidopsis lyrata HOM05D004282 ORTHO05D006804 6.8e-309 1063.1 535 98.1
CARHR047680 Cardamine hirsuta HOM05D004282 ORTHO05D006804 5.8e-308 1060.1 535 97.6
Thhalv10023408m.g Eutrema salsugineum HOM05D004282 ORTHO05D006804 7.1e-306 1053.1 535 96.6
Sp2g01000 Schrenkiella parvula HOM05D004282 ORTHO05D006804 6.0e-305 1050.0 535 96.4
C09p18660 Brassica napus HOM05D004282 ORTHO05D006804 1.3e-296 1022.3 536 93.5
A09p15390 Brassica napus HOM05D004282 ORTHO05D006804 3.1e-293 1011.1 535 92.7
BraA09t37181Z Brassica rapa HOM05D004282 ORTHO05D006804 4.0e-293 1010.7 535 92.5
BolC9t54762H Brassica oleracea HOM05D004282 ORTHO05D006804 2.0e-292 1008.4 536 92.7
Aa31LG2G870 Aethionema arabicum HOM05D004282 ORTHO05D006804 3.8e-291 1004.2 535 92.0
THA.LOC104809396 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 8.7e-280 966.5 535 86.9
THA.LOC104817993 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 2.1e-278 961.8 533 87.1
COL.COLO4_34472 Corchorus olitorius HOM05D004282 ORTHO05D006804 1.8e-264 915.6 535 82.6
RcHm_v2.0_Chr7g0219471 Rosa chinensis HOM05D004282 ORTHO05D006804 2.3e-264 915.2 535 83.2
Lj8A221T67 Lonicera japonica HOM05D004282 ORTHO05D006804 1.9e-263 912.1 536 82.5
MELO3C005680.2 Cucumis melo HOM05D004282 ORTHO05D006804 5.7e-263 910.6 535 81.5
Aqoxy7G00313 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 1.6e-262 909.1 535 81.9
MD06G1084500 Malus domestica HOM05D004282 ORTHO05D006804 1.6e-262 909.1 535 82.2
FvH4_5g27720 Fragaria vesca HOM05D004282 ORTHO05D006804 4.8e-262 907.5 535 83.0
ClCG01G002660 Citrullus lanatus HOM05D004282 ORTHO05D006804 6.3e-262 907.1 535 80.9
QL12p032840 Quercus lobata HOM05D004282 ORTHO05D006804 6.3e-262 907.1 534 81.5
Lalb_Chr05g0224721 Lupinus albus HOM05D004282 ORTHO05D006804 8.2e-262 906.7 535 81.7
CsaV3_5G002770 Cucumis sativus L. HOM05D004282 ORTHO05D006804 1.8e-261 905.6 535 80.9
PSO782G4766 Papaver somniferum HOM05D004282 ORTHO05D006804 2.4e-261 905.2 536 82.1
PGR042G2758 Punica granatum HOM05D004282 ORTHO05D006804 2.4e-261 905.2 535 82.1
Duzib084G1154 Durio zibethinus HOM05D004282 ORTHO05D006804 3.1e-261 904.8 535 81.7
FAN08G1277 Fragaria x ananassa HOM05D004282 ORTHO05D006804 3.1e-261 904.8 535 82.8
Hund14799 Selenicereus undatus HOM05D004282 ORTHO05D006804 5.3e-261 904.0 540 80.7
DCAR_006738 Daucus carota HOM05D004282 ORTHO05D006804 9.0e-261 903.3 535 82.1
DCAR_006739 Daucus carota HOM05D004282 ORTHO05D006804 9.0e-261 903.3 535 82.1
Lj4g0008271 Lotus japonicus HOM05D004282 ORTHO05D006804 2.0e-260 902.1 535 81.5
Prupe.5G100800 Prunus persica HOM05D004282 ORTHO05D006804 2.0e-260 902.1 535 81.3
FAN04G0421 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.6e-260 901.7 535 82.6
FAN18G3468 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.6e-260 901.7 542 82.1
PSO478G3502 Papaver somniferum HOM05D004282 ORTHO05D006804 4.5e-260 901.0 536 81.5
MD14G1105600 Malus domestica HOM05D004282 ORTHO05D006804 5.9e-260 900.6 535 81.1
Potri.003G128200 Populus trichocarpa HOM05D004282 ORTHO05D006804 5.9e-260 900.6 535 80.6
Manes.02G019600 Manihot esculenta HOM05D004282 ORTHO05D006804 7.6e-260 900.2 535 80.7
Duzib068G0684 Durio zibethinus HOM05D004282 ORTHO05D006804 1.0e-259 899.8 535 80.6
Sc01g0009620 Simmondsia chinensis HOM05D004282 ORTHO05D006804 1.0e-259 899.8 535 81.7
arahy.Tifrunner.gnm1.ann1.G1AAHV Arachis hypogaea HOM05D004282 ORTHO05D006804 1.7e-259 899.0 535 81.1
Eucgr.E00626 Eucalyptus grandis HOM05D004282 ORTHO05D006804 1.7e-259 899.0 535 80.9
Glyma.05G208400 Glycine max HOM05D004282 ORTHO05D006804 1.7e-259 899.0 535 81.9
TPR.G12833 Trifolium pratense HOM05D004282 ORTHO05D006804 1.7e-259 899.0 535 80.9
Thecc.03G279500 Theobroma cacao HOM05D004282 ORTHO05D006804 3.8e-259 897.9 535 80.7
Actinidia02002 Actinidia chinensis HOM05D004282 ORTHO05D006804 5.0e-259 897.5 535 81.1
Dinv37635 Davidia involucrata HOM05D004282 ORTHO05D006804 5.0e-259 897.5 535 81.3
FAN13G2512 Fragaria x ananassa HOM05D004282 ORTHO05D006804 6.5e-259 897.1 535 81.9
Ca_17527_v3 Cicer arietinum L. HOM05D004282 ORTHO05D006804 8.5e-259 896.7 535 80.4
Ciclev10019676m.g Citrus clementina HOM05D004282 ORTHO05D006804 1.4e-258 896.0 529 81.7
HanXRQChr13g0394231 Helianthus annuus HOM05D004282 ORTHO05D006804 2.5e-258 895.2 536 80.6
arahy.Tifrunner.gnm1.ann1.4VFV1G Arachis hypogaea HOM05D004282 ORTHO05D006804 4.2e-258 894.4 535 80.6
Medtr8g098325 Medicago truncatula HOM05D004282 ORTHO05D006804 4.2e-258 894.4 530 80.8
Aqoxy2G03117 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 7.2e-258 893.6 536 81.0
Psat7g032640 Pisum sativum HOM05D004282 ORTHO05D006804 7.2e-258 893.6 535 79.8
TAR375G0364 Trochodendron aralioides HOM05D004282 ORTHO05D006804 7.2e-258 893.6 535 80.6
CiPaw.11G134600 Carya illinoinensis HOM05D004282 ORTHO05D006804 1.2e-257 892.9 537 81.0
CSS0007959 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 2.1e-257 892.1 535 80.6
CSS0014359 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 2.1e-257 892.1 535 80.6
Gorai.003G158400 Gossypium raimondii HOM05D004282 ORTHO05D006804 2.1e-257 892.1 535 80.6
Sabra03G0091200 Salix brachista HOM05D004282 ORTHO05D006804 2.1e-257 892.1 535 80.0
Gohir.D08G201400 Gossypium hirsutum HOM05D004282 ORTHO05D006804 2.7e-257 891.7 535 80.4
Lsat_1_v5_gn_3_6581 Lactuca sativa HOM05D004282 ORTHO05D006804 2.7e-257 891.7 536 81.0
Gohir.A03G016700 Gossypium hirsutum HOM05D004282 ORTHO05D006804 4.6e-257 891.0 535 80.4
Phvul.002G290100 Phaseolus vulgaris HOM05D004282 ORTHO05D006804 4.6e-257 891.0 535 81.3
VMungo0251G3615 Vigna mungo HOM05D004282 ORTHO05D006804 1.0e-256 889.8 535 81.1
Gohir.D03G151200 Gossypium hirsutum HOM05D004282 ORTHO05D006804 2.3e-256 888.6 535 80.2
HanXRQChr06g0165861 Helianthus annuus HOM05D004282 ORTHO05D006804 2.3e-256 888.6 537 80.6
Cfa012224 Carpinus fangiana HOM05D004282 ORTHO05D006804 3.0e-256 888.3 537 80.1
DCAR_008399 Daucus carota HOM05D004282 ORTHO05D006804 3.0e-256 888.3 536 81.9
Manes.08G013300 Manihot esculenta HOM05D004282 ORTHO05D006804 3.0e-256 888.3 529 81.1
Sed0021454 Sechium edule HOM05D004282 ORTHO05D006804 3.0e-256 888.3 535 79.8
PGSC0003DMG400012205 Solanum tuberosum HOM05D004282 ORTHO05D006804 3.9e-256 887.9 534 80.1
Cc08_g14800 Coffea canephora HOM05D004282 ORTHO05D006804 5.1e-256 887.5 535 78.9
TWI81G0763 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 6.7e-256 887.1 535 80.0
Sopen08g029450 Solanum pennellii HOM05D004282 ORTHO05D006804 8.7e-256 886.7 533 79.9
Rhsim02G0231700 Rhododendron simsii HOM05D004282 ORTHO05D006804 1.1e-255 886.3 536 80.8
CANSAT21G1770 Cannabis sativa HOM05D004282 ORTHO05D006804 1.9e-255 885.6 535 80.0
Solyc08g081150.4 Solanum lycopersicum HOM05D004282 ORTHO05D006804 1.9e-255 885.6 533 80.1
TAR374G0019 Trochodendron aralioides HOM05D004282 ORTHO05D006804 3.3e-255 884.8 535 80.0
Lsat_1_v5_gn_6_6601 Lactuca sativa HOM05D004282 ORTHO05D006804 4.3e-255 884.4 536 80.4
EL10Ac2g04411 Beta vulgaris HOM05D004282 ORTHO05D006804 4.8e-254 880.9 536 80.4
Nn6g33428 Nelumbo nucifera HOM05D004282 ORTHO05D006804 1.1e-253 879.8 535 78.9
Hma1.2p1_0209F.1_g088780 Hydrangea macrophylla HOM05D004282 ORTHO05D006804 1.8e-253 879.0 534 80.3
Atru.chr9.2181 Acer truncatum HOM05D004282 ORTHO05D006804 2.4e-253 878.6 529 79.2
TWI60G0060 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 3.1e-253 878.2 535 79.8
AUR62009455 Chenopodium quinoa HOM05D004282 ORTHO05D006804 2.0e-252 875.5 536 80.0
Ah.10g038320 Amaranthus hybridus HOM05D004282 ORTHO05D006804 5.9e-252 874.0 536 79.1
AUR62023137 Chenopodium quinoa HOM05D004282 ORTHO05D006804 1.0e-251 873.2 536 79.5
Peaxi162Scf00119g00947 Petunia axillaris HOM05D004282 ORTHO05D006804 2.2e-251 872.1 531 79.5
CAN.G774.52 Capsicum annuum HOM05D004282 ORTHO05D006804 8.5e-251 870.2 525 79.6
ECA233G0272 Erigeron canadensis HOM05D004282 ORTHO05D006804 1.2e-249 866.3 530 79.2
Gorai.004G212300 Gossypium raimondii HOM05D004282 ORTHO05D006804 1.2e-249 866.3 535 78.9
ECA246G1826 Erigeron canadensis HOM05D004282 ORTHO05D006804 3.6e-249 864.8 537 76.9
Oeu019186.1 Olea europaea HOM05D004282 ORTHO05D006804 3.0e-248 861.7 535 76.4
Nitab4.5_0000678g0110 Nicotiana tabacum HOM05D004282 ORTHO05D006804 6.7e-248 860.5 556 76.6
Nitab4.5_0001615g0080 Nicotiana tabacum HOM05D004282 ORTHO05D006804 5.7e-247 857.4 556 76.4
MSTRG.11981 Avicennia marina HOM05D004282 ORTHO05D006804 9.7e-247 856.7 535 76.8
SHI07141 Sapria himalayana HOM05D004282 ORTHO05D006804 9.7e-247 856.7 529 76.6
SGA_v2.0_scaffold173G39175 Striga asiatica HOM05D004282 ORTHO05D006804 2.2e-246 855.5 536 76.7
MBI17_g24637_MAGBIO Magnolia biondii HOM05D004282 ORTHO05D006804 1.8e-245 852.4 526 78.7
Migut.A00734 Erythranthe guttata HOM05D004282 ORTHO05D006804 9.1e-245 850.1 535 76.1
Zm00001eb434370 Zea mays HOM05D004282 ORTHO05D006804 2.5e-242 842.0 526 76.6
Os08g0326600 Oryza sativa ssp. japonica HOM05D004282 ORTHO05D006804 7.2e-242 840.5 526 76.0
unitig_578.g16628 Utricularia gibba HOM05D004282 ORTHO05D006804 3.0e-240 835.1 535 75.3
vmacro11363 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 2.4e-237 825.5 682 63.5
Glyma.08G015000 Glycine max HOM05D004282 ORTHO05D006804 9.1e-237 823.5 494 81.6
GSVIVG01019748001 Vitis vinifera HOM05D004282 ORTHO05D006804 2.0e-236 822.4 535 75.9
Haze_08786 Corylus avellana HOM05D004282 ORTHO05D006804 1.2e-233 813.1 496 79.4
Gohir.A08G182900 Gossypium hirsutum HOM05D004282 ORTHO05D006804 1.8e-229 799.3 493 79.1
vmacro22817 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 1.8e-229 799.3 666 63.4
ATR1101G056 Amborella trichopoda HOM05D004282 ORTHO05D006804 1.5e-226 789.6 559 68.9
Oeu009150.1 Olea europaea HOM05D004282 ORTHO05D006804 4.2e-226 788.1 539 71.1
AagrBONN_evm.TU.Sc2ySwM_344.3490 Anthoceros agrestis HOM05D004282 ORTHO05D006804 4.0e-224 781.6 527 69.8
Pp3c8_7320 Physcomitrium patens HOM05D004282 ORTHO05D006804 4.4e-223 778.1 527 69.4
Mapoly0002s0326 Marchantia polymorpha HOM05D004282 ORTHO05D006804 2.9e-219 765.4 528 68.6
CBR_g48399 Chara braunii HOM05D004282 ORTHO05D006804 1.3e-214 750.0 526 67.5
MCO08G312 Micromonas commoda HOM05D004282 ORTHO05D006804 2.4e-213 745.7 528 65.9
SMO116G0368 Selaginella moellendorffii HOM05D004282 ORTHO05D006804 1.3e-211 740.0 535 65.6
BcaNung07334 Brassica carinata HOM05D004282 ORTHO05D006804 3.3e-210 735.3 421 86.9
Lj2A0T39 Lonicera japonica HOM05D004282 ORTHO05D006804 1.4e-208 729.9 536 70.1
Cre02.g092900 Chlamydomonas reinhardtii HOM05D004282 ORTHO05D006804 1.9e-202 709.5 526 64.6
Lj2A185G23 Lonicera japonica HOM05D004282 ORTHO05D006804 1.0e-200 703.7 441 78.9
CDE06G0245 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 4.4e-199 698.4 403 80.9
PRCOL_00000667 Prasinoderma coloniale HOM05D004282 ORTHO05D006804 2.9e-198 695.7 525 63.4
HPP92_014989 Vanilla planifolia HOM05D004282 ORTHO05D006804 1.7e-187 659.8 497 64.2
CDE06G1269 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 7.8e-180 634.4 497 65.6
CiPaw.12G092600 Carya illinoinensis HOM05D004282 ORTHO05D006804 1.6e-164 583.6 422 68.7
Sabra01G0078200 Salix brachista HOM05D004282 ORTHO05D006804 4.8e-153 545.4 710 47.7
Cfa023610 Carpinus fangiana HOM05D004282 ORTHO05D006804 1.3e-137 494.2 541 51.8
Cpa.g.c40776 Carica papaya HOM05D004282 ORTHO05D006804 3.7e-129 466.1 299 75.6
SEGI_10668 Sequoiadendron giganteum HOM05D004282 ORTHO05D006804 2.7e-124 449.9 312 70.5
SMO165G0029 Selaginella moellendorffii HOM05D004282 ORTHO05D006804 1.0e-118 431.4 537 46.0
CDE02G0075 Ceratophyllum demersum HOM05D004282 ORTHO05D021217 1.4e-99 367.9 262 69.1
Pp3c3_31480 Physcomitrium patens HOM05D004282 ORTHO05D006804 3.4e-98 363.2 411 48.7
Cpa.g.sc74.54 Carica papaya HOM05D004282 ORTHO05D022242 4.6e-71 273.1 184 72.3
Actinidia14566 Actinidia chinensis HOM05D004282 ORTHO05D017169 3.0e-70 270.4 148 85.8
ECA233G3991 Erigeron canadensis HOM05D004282 ORTHO05D006804 1.6e-60 238.0 148 76.4
CDE02G2749 Ceratophyllum demersum HOM05D004282 ORTHO05D022242 2.9e-41 174.1 140 60.7
ATR0680G380 Amborella trichopoda HOM05D004282 ORTHO05D006804 1.6e-39 168.3 222 45.0
GSVIVG01010145001 Vitis vinifera HOM05D004282 ORTHO05D021217 7.4e-37 159.5 95 80.0
QL09p052209 Quercus lobata HOM05D004282 ORTHO05D022242 2.0e-34 151.4 104 72.1
CANSAT64G0187 Cannabis sativa HOM05D004282 ORTHO05D006804 1.3e-33 148.7 103 73.8
ATR0680G421 Amborella trichopoda HOM05D004282 ORTHO05D021217 5.5e-32 143.3 93 75.3
TAR633G2425 Trochodendron aralioides HOM05D004282 ORTHO05D022242 1.5e-18 98.6 93 62.4
Cc06_g21260 Coffea canephora HOM05D004282 ORTHO05D017169 7.2e-16 89.7 46 87.0
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 6.3e-12 76.6 45 80.0
TAR633G2043 Trochodendron aralioides HOM05D004282 ORTHO05D006540 8.2e-12 76.3 102 46.1
VMungo0464G0647 Vigna mungo HOM05D004282 ORTHO05D021217 2.4e-11 74.7 44 79.5
VMungo0540G0566 Vigna mungo HOM05D004282 ORTHO05D021217 2.4e-11 74.7 44 79.5
RcHm_v2.0_Chr1g0356411 Rosa chinensis HOM05D004282 ORTHO05D341678 4.5e-10 70.5 50 64.0
A09p35740 Brassica napus HOM05D004282 ORTHO05D017169 7.7e-10 69.7 41 82.9
A09p59280 Brassica napus HOM05D004282 ORTHO05D017169 7.7e-10 69.7 41 82.9
BraA09t41310Z Brassica rapa HOM05D004282 ORTHO05D017169 7.7e-10 69.7 41 82.9
A03p47680 Brassica napus HOM05D004282 ORTHO05D017169 9.4e-08 62.8 38 81.6
BraA09t37854Z Brassica rapa HOM05D004282 ORTHO05D017169 9.4e-08 62.8 38 81.6
RcHm_v2.0_Chr1g0321151 Rosa chinensis HOM05D004282 ORTHO05D022242 9.4e-08 62.8 48 68.8
SGA_v2.0_scaffold43G16453 Striga asiatica HOM05D004282 ORTHO05D404191 6.1e-07 60.1 41 65.9
Ah.04g149470 Amaranthus hybridus HOM05D003983 ORTHO05D004562 8.0e-07 59.7 196 26.0
Ca_12957_v3 Cicer arietinum L. HOM05D004282 ORTHO05D149096 2.3e-06 58.2 49 55.1
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 5.2e-06 57.0 232 28.9
Carub.0001s2535 Capsella rubella HOM05D003983 ORTHO05D004562 5.2e-06 57.0 194 27.3
THA.LOC104809791 Tarenaya hassleriana HOM05D003983 ORTHO05D004562 5.2e-06 57.0 198 26.8
EL10Ac3g07448 Beta vulgaris HOM05D003983 ORTHO05D004562 8.8e-06 56.2 200 24.5
CAN.G1241.25 Capsicum annuum HOM05D003754 ORTHO05D004530 8.8e-06 56.2 188 28.2
RcHm_v2.0_Chr7g0219111 Rosa chinensis HOM05D004282 ORTHO05D022242 8.8e-06 56.2 75 52.0
Sed0000196 Sechium edule HOM05D003983 ORTHO05D004562 8.8e-06 56.2 201 24.9
TWI74G1079 Tripterygium wilfordii HOM05D003983 ORTHO05D004562 8.8e-06 56.2 201 26.9


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