Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0026 Capsella rubella HOM05D003558 ORTHO05D114402 3.9e-88 328.2 176 100.0
BcaB07g31496 Brassica carinata HOM05D003558 ORTHO05D004392 2.4e-08 63.2 64 59.4
A09p14640 Brassica napus HOM05D003558 ORTHO05D004392 2.4e-08 63.2 64 59.4
BraA09t37110Z Brassica rapa HOM05D003558 ORTHO05D004392 2.4e-08 63.2 64 59.4
Carub.0002s0023 Capsella rubella HOM05D003558 ORTHO05D004392 3.1e-08 62.8 64 59.4
Sp2g00230 Schrenkiella parvula HOM05D003558 ORTHO05D004392 5.3e-08 62.0 64 59.4
AL2G10280 Arabidopsis lyrata HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
AT1G64520 Arabidopsis thaliana HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
BcaB07g31471 Brassica carinata HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
BcaC04g22576 Brassica carinata HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
BcaC04g22613 Brassica carinata HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
A09p14400 Brassica napus HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
C09p17320 Brassica napus HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
C09p17720 Brassica napus HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
BolC9t54666H Brassica oleracea HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
BraA09t37087Z Brassica rapa HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
Thhalv10023640m.g Eutrema salsugineum HOM05D003558 ORTHO05D004392 9.0e-08 61.2 64 57.8
CARHR046430 Cardamine hirsuta HOM05D003558 ORTHO05D004392 1.5e-07 60.5 64 57.8
AL7G47120 Arabidopsis lyrata HOM05D003558 ORTHO05D004392 2.0e-07 60.1 64 56.2
BolC9t54634H Brassica oleracea HOM05D003558 ORTHO05D004392 2.6e-07 59.7 64 56.2
Aa31LG2G1510 Aethionema arabicum HOM05D003558 ORTHO05D004392 2.2e-06 56.6 64 54.7
Sp7g00080 Schrenkiella parvula HOM05D003558 ORTHO05D004392 4.9e-06 55.5 64 53.1


User provided reference genes

Program Settings