Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 4.4e-134 481.5 278 100.0
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 4.2e-92 342.0 277 80.5
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 2.6e-86 322.8 274 76.3
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 8.2e-80 301.2 254 69.3
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 1.7e-77 293.5 270 69.6
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 3.2e-76 289.3 267 72.3
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 2.2e-72 276.6 276 68.1
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 3.8e-69 265.8 269 65.8
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 3.8e-69 265.8 269 65.8
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 1.1e-68 264.2 270 64.8
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 1.1e-68 264.2 270 64.8
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 6.1e-67 258.5 281 57.7
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 1.6e-59 233.8 266 63.2
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 3.8e-37 159.5 338 38.8
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 6.5e-37 158.7 310 43.9
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.9e-36 157.1 283 41.0
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 5.5e-36 155.6 346 42.2
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 1.2e-35 154.5 207 48.8
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 1.2e-35 154.5 297 39.4
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 1.6e-35 154.1 320 41.9
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.1e-35 153.7 283 40.3
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 2.7e-35 153.3 279 40.5
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 1.4e-34 151.0 361 40.4
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.8e-34 150.6 313 43.5
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 2.3e-34 150.2 355 40.3
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 2.3e-34 150.2 286 42.3
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 2.3e-34 150.2 351 41.3
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 4.0e-34 149.4 374 40.4
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 5.2e-34 149.1 282 46.5
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 5.2e-34 149.1 322 36.6
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 6.8e-34 148.7 350 42.0
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 8.8e-34 148.3 323 41.8
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 1.2e-33 147.9 269 46.1
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 1.2e-33 147.9 277 47.7
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 4.4e-33 146.0 282 38.3
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 5.7e-33 145.6 286 44.8
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 7.5e-33 145.2 311 42.4
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 1.7e-32 144.1 267 47.9
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 2.2e-32 143.7 286 44.1
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.2e-32 143.7 286 44.1
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 2.8e-32 143.3 339 41.9
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 2.8e-32 143.3 335 40.6
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 6.3e-32 142.1 240 46.7
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 8.3e-32 141.7 346 38.4
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 1.1e-31 141.4 203 45.3
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.1e-31 141.4 288 42.4
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.4e-31 141.0 286 44.1
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 1.4e-31 141.0 266 47.4
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.4e-31 140.2 253 49.0
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 3.1e-31 139.8 286 44.4
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 3.1e-31 139.8 200 56.5
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 4.1e-31 139.4 356 39.6
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 7.0e-31 138.7 286 44.4
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 1.6e-30 137.5 344 32.8
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 2.7e-30 136.7 276 46.4
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 3.5e-30 136.3 256 47.3
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 4.5e-30 136.0 256 47.3
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 8.6e-29 131.7 239 45.6
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 1.1e-28 131.3 204 55.9
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 1.9e-28 130.6 300 41.0
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 3.3e-28 129.8 347 37.2
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 3.3e-28 129.8 299 44.1
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 4.2e-28 129.4 198 44.4
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 4.2e-28 129.4 198 44.9
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 5.5e-28 129.0 351 37.6
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 5.5e-28 129.0 320 33.8
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 9.5e-28 128.3 271 45.8
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 1.2e-27 127.9 242 46.3
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 2.1e-27 127.1 243 48.1
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 3.6e-27 126.3 242 45.9
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 6.1e-27 125.6 278 35.6
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 8.0e-27 125.2 340 39.1
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 4.4e-25 119.4 334 38.0
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 1.3e-24 117.9 290 41.4
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 1.7e-24 117.5 359 37.0
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 2.2e-24 117.1 396 35.1
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 2.4e-23 113.6 260 44.6
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 5.4e-23 112.5 338 32.8
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 2.1e-19 100.5 289 39.8
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 4.7e-19 99.4 204 47.1
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 8.0e-19 98.6 239 41.8
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 1.8e-18 97.4 297 37.0
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 5.2e-18 95.9 283 38.5
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 8.9e-18 95.1 281 39.1
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 5.8e-17 92.4 120 53.3
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 1.7e-16 90.9 241 42.7
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 1.1e-15 88.2 276 39.5
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 2.4e-15 87.0 320 35.0
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 3.0e-13 80.1 262 29.0
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 5.0e-13 79.3 217 41.0
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 8.0e-11 72.0 223 30.0
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.8e-10 70.9 231 31.2
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 4.0e-10 69.7 235 28.9
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 1.7e-08 64.3 304 29.9
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 8.3e-08 62.0 99 43.4
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 2.4e-07 60.5 76 47.4
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 1.6e-06 57.8 107 37.4
CSS0030432 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 7.8e-06 55.5 128 44.5


User provided reference genes

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