Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 1.1e-207 726.5 373 100.0
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 3.1e-191 671.8 373 92.0
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 9.9e-190 666.8 369 91.9
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 7.6e-174 614.0 373 84.7
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 3.0e-170 602.1 374 82.1
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 6.7e-170 600.9 373 81.5
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 1.9e-169 599.4 373 81.5
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 1.9e-169 599.4 372 81.2
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 2.2e-165 585.9 384 79.9
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 2.8e-160 568.9 375 79.5
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 2.8e-160 568.9 375 79.5
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 1.4e-159 566.6 375 79.5
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 4.1e-159 565.1 375 79.2
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 9.1e-159 563.9 375 78.4
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 2.6e-158 562.4 374 77.8
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 1.5e-150 536.6 376 73.1
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 1.1e-148 530.4 419 68.3
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 2.5e-148 529.3 381 70.1
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 8.2e-144 514.2 321 82.9
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 2.4e-135 486.1 338 71.6
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 5.3e-135 485.0 342 70.2
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 7.0e-135 484.6 350 68.0
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 1.2e-134 483.8 353 68.3
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 1.2e-134 483.8 340 70.0
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.0e-134 483.0 350 68.0
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 2.7e-134 482.6 350 68.0
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 7.7e-134 481.1 322 73.3
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 7.7e-134 481.1 318 73.6
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 1.7e-133 479.9 347 68.6
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 2.2e-133 479.6 335 71.3
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 2.9e-133 479.2 321 72.0
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 5.0e-133 478.4 357 69.2
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 6.5e-133 478.0 344 69.2
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 8.5e-133 477.6 342 69.3
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.1e-132 477.2 324 71.6
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 1.9e-132 476.5 325 71.1
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 1.9e-132 476.5 327 70.6
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 2.5e-132 476.1 320 71.9
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 3.2e-132 475.7 329 71.4
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 5.5e-132 474.9 338 69.5
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 7.2e-132 474.6 358 66.2
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 9.4e-132 474.2 324 71.0
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 2.7e-131 472.6 363 67.2
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 2.7e-131 472.6 335 70.1
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 3.6e-131 472.2 329 69.9
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 3.6e-131 472.2 347 68.6
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 3.6e-131 472.2 357 66.9
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 4.7e-131 471.9 324 71.0
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 4.7e-131 471.9 357 66.7
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 6.1e-131 471.5 331 70.1
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 6.1e-131 471.5 353 67.1
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 1.0e-130 470.7 323 70.6
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 1.4e-130 470.3 341 68.6
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 2.3e-130 469.5 323 70.9
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.0e-130 469.2 337 68.8
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 3.0e-130 469.2 384 63.3
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 5.2e-130 468.4 333 68.8
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 8.8e-130 467.6 342 68.7
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 1.2e-129 467.2 334 69.5
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 1.5e-129 466.8 359 66.9
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 1.5e-129 466.8 340 69.4
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.6e-129 466.1 368 64.7
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 3.4e-129 465.7 339 68.7
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 1.3e-128 463.8 363 66.1
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 2.2e-128 463.0 338 68.3
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 3.7e-128 462.2 351 65.8
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 2.4e-127 459.5 348 66.1
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 3.1e-127 459.1 331 67.4
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 7.0e-127 458.0 376 62.8
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 2.0e-126 456.4 397 60.7
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 2.0e-126 456.4 397 60.7
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 5.9e-126 454.9 342 66.7
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 1.0e-125 454.1 323 68.1
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 8.6e-125 451.1 333 66.7
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 1.9e-124 449.9 334 67.7
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 5.5e-124 448.4 275 78.2
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 7.2e-124 448.0 340 66.8
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 1.2e-123 447.2 353 66.6
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 1.0e-122 444.1 344 65.4
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 2.3e-122 443.0 354 64.4
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 3.0e-122 442.6 340 64.7
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 9.8e-121 437.6 342 63.7
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 2.8e-120 436.0 345 65.5
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.8e-120 436.0 339 63.7
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 6.3e-120 434.9 354 61.6
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 9.2e-119 431.0 355 61.7
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 2.0e-118 429.9 311 67.8
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 7.8e-118 427.9 357 61.3
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 7.8e-118 427.9 317 65.0
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 1.9e-116 423.3 345 63.5
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 3.3e-116 422.5 461 51.2
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 3.3e-116 422.5 309 68.9
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.6e-115 420.2 330 63.6
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 2.8e-115 419.5 328 66.2
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 1.8e-114 416.8 451 51.0
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 2.9e-112 409.5 314 65.0
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 6.4e-112 408.3 376 58.5
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 4.1e-111 405.6 321 64.2
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 5.4e-111 405.2 363 58.1
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 2.0e-110 403.3 364 60.2
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 8.6e-109 397.9 328 62.8
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 5.2e-106 388.7 391 55.2
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.2e-105 387.5 271 68.6
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.4e-103 380.6 298 64.1
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 4.6e-102 375.6 265 70.2
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 1.5e-100 370.5 311 63.0
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 8.9e-98 361.3 258 67.1
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 1.1e-95 354.4 328 57.6
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 1.2e-94 350.9 219 76.3
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 8.6e-93 344.7 215 75.8
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 2.5e-92 343.2 216 74.1
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 2.4e-90 336.7 270 63.7
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 2.4e-87 326.6 230 73.0
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 1.4e-82 310.8 219 70.8
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.0e-82 309.3 282 55.7
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 5.2e-82 308.9 565 36.8
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 6.9e-82 308.5 218 70.6
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 2.1e-78 297.0 198 69.7
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.7e-77 293.9 216 66.7
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 2.3e-77 293.5 215 66.5
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 9.0e-74 281.6 232 60.3
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 1.9e-68 263.8 328 47.6
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 2.9e-64 250.0 195 67.2
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 7.9e-46 188.7 254 41.7
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 1.1e-39 168.3 254 37.8
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 4.2e-31 139.8 290 34.8
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 2.0e-28 131.0 119 58.8
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 2.2e-27 127.5 252 33.3
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 6.3e-27 125.9 88 75.0
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 4.5e-25 119.8 130 50.0
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 1.0e-24 118.6 101 64.4
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 2.9e-24 117.1 142 49.3
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.2e-23 112.5 95 60.0
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 2.7e-22 110.5 103 56.3
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 3.6e-22 110.2 98 58.2
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.3e-21 107.5 64 78.1
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.3e-21 107.5 64 78.1
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 5.2e-21 106.3 101 54.5
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.5e-20 104.8 64 73.4
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.5e-20 104.8 64 73.4
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.8e-19 100.5 64 70.3
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 1.6e-14 84.7 170 37.6
CARHR054100 Cardamine hirsuta HOM05D004930 ORTHO05D006531 5.2e-13 79.7 57 71.9
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 6.8e-13 79.3 73 60.3
MCO09G146 Micromonas commoda HOM05D004930 ORTHO05D270306 1.2e-12 78.6 235 27.7
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 5.7e-12 76.3 166 30.7
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 9.1e-10 68.9 171 31.0
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 1.3e-08 65.1 193 29.5


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