Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s3054 Capsella rubella HOM05D004396 ORTHO05D005272 5.8e-56 220.7 116 100.0
AL1G46340 Arabidopsis lyrata HOM05D004396 ORTHO05D005272 1.7e-55 219.2 116 98.3
CARHR031580 Cardamine hirsuta HOM05D004396 ORTHO05D005272 1.7e-55 219.2 116 98.3
Thhalv10009144m.g Eutrema salsugineum HOM05D004396 ORTHO05D005272 1.7e-55 219.2 116 98.3
AT1G32210 Arabidopsis thaliana HOM05D004396 ORTHO05D005272 4.9e-55 217.6 116 97.4
BcaB07g32895 Brassica carinata HOM05D004396 ORTHO05D005272 4.9e-55 217.6 116 98.3
BraA09t38945Z Brassica rapa HOM05D004396 ORTHO05D005272 4.9e-55 217.6 116 98.3
BcaB03g13752 Brassica carinata HOM05D004396 ORTHO05D005272 6.5e-55 217.2 116 97.4
BcaB04g17995 Brassica carinata HOM05D004396 ORTHO05D005272 6.5e-55 217.2 116 97.4
BcaC05g27252 Brassica carinata HOM05D004396 ORTHO05D005272 8.4e-55 216.9 116 97.4
C05p31610 Brassica napus HOM05D004396 ORTHO05D005272 8.4e-55 216.9 116 97.4
A05p25120 Brassica napus HOM05D004396 ORTHO05D005272 1.4e-54 216.1 116 96.6
BraA05t21392Z Brassica rapa HOM05D004396 ORTHO05D005272 1.4e-54 216.1 116 96.6
Sp1g27890 Schrenkiella parvula HOM05D004396 ORTHO05D005272 3.2e-54 214.9 116 96.6
CARHR129690 Cardamine hirsuta HOM05D004396 ORTHO05D005272 1.6e-53 212.6 116 94.8
AT2G35520 Arabidopsis thaliana HOM05D004396 ORTHO05D005272 2.1e-53 212.2 116 94.8
Carub.0004s1721 Capsella rubella HOM05D004396 ORTHO05D005272 4.6e-53 211.1 116 92.2
THA.LOC104814414 Tarenaya hassleriana HOM05D004396 ORTHO05D005272 4.6e-53 211.1 116 94.8
Thhalv10017441m.g Eutrema salsugineum HOM05D004396 ORTHO05D005272 6.1e-53 210.7 116 93.1
Lalb_Chr05g0215751 Lupinus albus HOM05D004396 ORTHO05D005272 1.3e-52 209.5 116 93.1
THA.LOC104798491 Tarenaya hassleriana HOM05D004396 ORTHO05D005272 1.8e-52 209.1 116 94.0
arahy.Tifrunner.gnm1.ann1.Z3U2VZ Arachis hypogaea HOM05D004396 ORTHO05D005272 5.1e-52 207.6 116 92.2
ClCG10G001270 Citrullus lanatus HOM05D004396 ORTHO05D005272 1.1e-51 206.5 116 91.4
Phvul.002G136700 Phaseolus vulgaris HOM05D004396 ORTHO05D005272 1.5e-51 206.1 116 91.4
QL12p001650 Quercus lobata HOM05D004396 ORTHO05D005272 3.3e-51 204.9 115 91.3
AL4G31570 Arabidopsis lyrata HOM05D004396 ORTHO05D005272 4.3e-51 204.5 113 93.8
Lj2g0004535 Lotus japonicus HOM05D004396 ORTHO05D005272 4.3e-51 204.5 116 89.7
Ca_25178_v3 Cicer arietinum L. HOM05D004396 ORTHO05D005272 7.4e-51 203.8 113 92.0
CiPaw.11G098400 Carya illinoinensis HOM05D004396 ORTHO05D005272 9.7e-51 203.4 116 90.5
CsaV3_3G001340 Cucumis sativus L. HOM05D004396 ORTHO05D005272 9.7e-51 203.4 116 90.5
Lalb_Chr16g0381071 Lupinus albus HOM05D004396 ORTHO05D005272 9.7e-51 203.4 116 87.9
Medtr3g023120 Medicago truncatula HOM05D004396 ORTHO05D005272 9.7e-51 203.4 116 90.5
TWI81G0111 Tripterygium wilfordii HOM05D004396 ORTHO05D005272 9.7e-51 203.4 116 89.7
VMungo1215G3227 Vigna mungo HOM05D004396 ORTHO05D005272 9.7e-51 203.4 116 90.5
Nn3g19387 Nelumbo nucifera HOM05D004396 ORTHO05D005272 1.3e-50 203.0 116 89.7
GSVIVG01013064001 Vitis vinifera HOM05D004396 ORTHO05D005272 1.6e-50 202.6 116 89.7
CSS0013599 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 2.8e-50 201.8 113 92.0
CSS0046263 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 2.8e-50 201.8 113 92.0
Haze_08163 Corylus avellana HOM05D004396 ORTHO05D005272 2.8e-50 201.8 116 89.7
CSS0033679 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 3.7e-50 201.4 117 91.5
Potri.003G096800 Populus trichocarpa HOM05D004396 ORTHO05D005272 4.8e-50 201.1 116 88.8
TWI60G0023 Tripterygium wilfordii HOM05D004396 ORTHO05D005272 4.8e-50 201.1 116 87.9
HanXRQChr13g0414241 Helianthus annuus HOM05D004396 ORTHO05D005272 1.1e-49 199.9 118 91.5
Hma1.2p1_0870F.1_g230890 Hydrangea macrophylla HOM05D004396 ORTHO05D005272 1.1e-49 199.9 113 91.2
PSO339G1317 Papaver somniferum HOM05D004396 ORTHO05D005272 1.4e-49 199.5 113 90.3
PSO384G3027 Papaver somniferum HOM05D004396 ORTHO05D005272 1.4e-49 199.5 113 90.3
PSO541G6011 Papaver somniferum HOM05D004396 ORTHO05D005272 1.4e-49 199.5 113 90.3
Peaxi162Scf00170g00812 Petunia axillaris HOM05D004396 ORTHO05D005272 1.4e-49 199.5 113 90.3
TAR375G0183 Trochodendron aralioides HOM05D004396 ORTHO05D005272 1.4e-49 199.5 116 88.8
Lsat_1_v5_gn_3_19181 Lactuca sativa HOM05D004396 ORTHO05D005272 1.8e-49 199.1 113 92.0
Rhsim11G0021700 Rhododendron simsii HOM05D004396 ORTHO05D005272 1.8e-49 199.1 113 91.2
Manes.12G090054 Manihot esculenta HOM05D004396 ORTHO05D005272 2.4e-49 198.7 116 88.8
PSO675G8737 Papaver somniferum HOM05D004396 ORTHO05D005272 2.4e-49 198.7 113 91.2
PGR031G0362 Punica granatum HOM05D004396 ORTHO05D005272 2.4e-49 198.7 116 87.9
PGR031G2119 Punica granatum HOM05D004396 ORTHO05D005272 2.4e-49 198.7 116 87.9
Sabra03G0065300 Salix brachista HOM05D004396 ORTHO05D005272 2.4e-49 198.7 116 87.9
SGA_v2.0_scaffold198G41072 Striga asiatica HOM05D004396 ORTHO05D005272 3.1e-49 198.4 113 90.3
Actinidia14779 Actinidia chinensis HOM05D004396 ORTHO05D005272 4.1e-49 198.0 113 91.2
ATR0626G058 Amborella trichopoda HOM05D004396 ORTHO05D005272 4.1e-49 198.0 113 90.3
Ciclev10002883m.g Citrus clementina HOM05D004396 ORTHO05D005272 4.1e-49 198.0 116 88.8
COL.COLO4_16940 Corchorus olitorius HOM05D004396 ORTHO05D005272 4.1e-49 198.0 113 91.2
SGA_v2.0_scaffold36G14295 Striga asiatica HOM05D004396 ORTHO05D005272 4.1e-49 198.0 113 89.4
TPR.G19425 Trifolium pratense HOM05D004396 ORTHO05D005272 4.1e-49 198.0 113 90.3
Ca_27048_v3 Cicer arietinum L. HOM05D004396 ORTHO05D005272 5.3e-49 197.6 115 88.7
Dinv25260 Davidia involucrata HOM05D004396 ORTHO05D005272 5.3e-49 197.6 113 90.3
Dinv29003 Davidia involucrata HOM05D004396 ORTHO05D005272 5.3e-49 197.6 113 91.2
Glyma.09G207800 Glycine max HOM05D004396 ORTHO05D005272 5.3e-49 197.6 110 90.9
Manes.04G055632 Manihot esculenta HOM05D004396 ORTHO05D005272 5.3e-49 197.6 116 87.9
vmacro00278 Vaccinium macrocarpon HOM05D004396 ORTHO05D005272 5.3e-49 197.6 113 90.3
DCAR_008222 Daucus carota HOM05D004396 ORTHO05D005272 6.9e-49 197.2 113 90.3
Hund10776 Selenicereus undatus HOM05D004396 ORTHO05D005272 6.9e-49 197.2 116 87.1
Actinidia18135 Actinidia chinensis HOM05D004396 ORTHO05D005272 9.0e-49 196.8 113 90.3
MSTRG.12178 Avicennia marina HOM05D004396 ORTHO05D005272 9.0e-49 196.8 113 88.5
CAN.G726.24 Capsicum annuum HOM05D004396 ORTHO05D005272 1.2e-48 196.4 113 89.4
Cc08_g03470 Coffea canephora HOM05D004396 ORTHO05D005272 1.2e-48 196.4 113 89.4
ECA240G0094 Erigeron canadensis HOM05D004396 ORTHO05D005272 1.2e-48 196.4 113 91.2
Eucgr.H00688 Eucalyptus grandis HOM05D004396 ORTHO05D005272 1.2e-48 196.4 116 87.1
HanXRQChr06g0172781 Helianthus annuus HOM05D004396 ORTHO05D005272 1.5e-48 196.1 113 90.3
Psat5g213400 Pisum sativum HOM05D004396 ORTHO05D005272 1.5e-48 196.1 116 87.1
CDE08G0196 Ceratophyllum demersum HOM05D004396 ORTHO05D005272 2.0e-48 195.7 113 88.5
Solyc08g076460.3 Solanum lycopersicum HOM05D004396 ORTHO05D005272 2.0e-48 195.7 113 88.5
Sopen08g025040 Solanum pennellii HOM05D004396 ORTHO05D005272 2.0e-48 195.7 113 88.5
PGSC0003DMG400014795 Solanum tuberosum HOM05D004396 ORTHO05D005272 2.0e-48 195.7 113 88.5
Thecc.03G310300 Theobroma cacao HOM05D004396 ORTHO05D005272 2.0e-48 195.7 113 90.3
Hma1.2p1_0890F.1_g233090 Hydrangea macrophylla HOM05D004396 ORTHO05D005272 2.6e-48 195.3 113 88.5
Aqoxy7G03666 Aquilegia oxysepala HOM05D004396 ORTHO05D005272 3.4e-48 194.9 113 87.6
Nitab4.5_0000529g0110 Nicotiana tabacum HOM05D004396 ORTHO05D005272 3.4e-48 194.9 113 86.7
Sc01g0005580 Simmondsia chinensis HOM05D004396 ORTHO05D005272 4.5e-48 194.5 116 87.1
TPR.G31993 Trifolium pratense HOM05D004396 ORTHO05D005272 5.9e-48 194.1 116 86.2
Gorai.003G185400 Gossypium raimondii HOM05D004396 ORTHO05D005272 7.7e-48 193.7 113 89.4
Rhsim07G0132100 Rhododendron simsii HOM05D004396 ORTHO05D005272 1.0e-47 193.4 113 89.4
FAN24G1987 Fragaria x ananassa HOM05D004396 ORTHO05D005272 1.3e-47 193.0 113 88.5
Oeu027093.1 Olea europaea HOM05D004396 ORTHO05D005272 1.3e-47 193.0 113 87.6
Duzib205G0471 Durio zibethinus HOM05D004396 ORTHO05D005272 1.7e-47 192.6 113 88.5
ECA240G0984 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.7e-47 192.6 113 89.4
Medtr5g029240 Medicago truncatula HOM05D004396 ORTHO05D005272 1.7e-47 192.6 110 89.1
Glyma.14G201900 Glycine max HOM05D004396 ORTHO05D005272 2.2e-47 192.2 110 89.1
RcHm_v2.0_Chr6g0251281 Rosa chinensis HOM05D004396 ORTHO05D005272 2.2e-47 192.2 113 89.4
FAN20G1930 Fragaria x ananassa HOM05D004396 ORTHO05D005272 2.9e-47 191.8 113 87.6
FAN27G1914 Fragaria x ananassa HOM05D004396 ORTHO05D005272 2.9e-47 191.8 113 87.6
Nitab4.5_0000556g0250 Nicotiana tabacum HOM05D004396 ORTHO05D005272 2.9e-47 191.8 113 85.8
Nitab4.5_0004528g0030 Nicotiana tabacum HOM05D004396 ORTHO05D005272 2.9e-47 191.8 113 85.8
Prupe.8G007900 Prunus persica HOM05D004396 ORTHO05D005272 2.9e-47 191.8 113 89.4
Duzib084G0048 Durio zibethinus HOM05D004396 ORTHO05D005272 3.8e-47 191.4 113 88.5
Gohir.A12G206100 Gossypium hirsutum HOM05D004396 ORTHO05D005272 5.0e-47 191.0 113 88.5
Gohir.D12G208400 Gossypium hirsutum HOM05D004396 ORTHO05D005272 5.0e-47 191.0 113 88.5
Gorai.008G224000 Gossypium raimondii HOM05D004396 ORTHO05D005272 5.0e-47 191.0 113 88.5
MD10G1005100 Malus domestica HOM05D004396 ORTHO05D005272 6.5e-47 190.7 113 88.5
HPP92_025493 Vanilla planifolia HOM05D004396 ORTHO05D005272 6.5e-47 190.7 116 85.3
MD05G1007700 Malus domestica HOM05D004396 ORTHO05D005272 8.5e-47 190.3 113 87.6
Potri.001G136800 Populus trichocarpa HOM05D004396 ORTHO05D005272 8.5e-47 190.3 116 85.3
Prupe.4G286900 Prunus persica HOM05D004396 ORTHO05D005272 1.9e-46 189.1 113 88.5
FvH4_2g00930 Fragaria vesca HOM05D004396 ORTHO05D005272 2.5e-46 188.7 111 87.4
HPP92_025445 Vanilla planifolia HOM05D004396 ORTHO05D005272 2.5e-46 188.7 116 84.5
PGSC0003DMG400018505 Solanum tuberosum HOM05D004396 ORTHO05D005272 4.2e-46 188.0 117 82.1
SalBow1G7612 Salvia bowleyana HOM05D004396 ORTHO05D005272 7.2e-46 187.2 113 85.0
unitig_899.g15442 Utricularia gibba HOM05D004396 ORTHO05D005272 7.2e-46 187.2 114 86.8
Migut.A01174 Erythranthe guttata HOM05D004396 ORTHO05D005272 1.6e-45 186.0 113 85.0
SEGI_22391 Sequoiadendron giganteum HOM05D004396 ORTHO05D005272 1.6e-45 186.0 116 80.2
Cpa.g.sc42.149 Carica papaya HOM05D004396 ORTHO05D005272 3.6e-45 184.9 108 88.0
EL10Ac5g11811 Beta vulgaris HOM05D004396 ORTHO05D005272 7.9e-45 183.7 152 68.4
Lsat_1_v5_gn_6_80060 Lactuca sativa HOM05D004396 ORTHO05D005272 7.9e-45 183.7 105 89.5
Os04g0397000 Oryza sativa ssp. japonica HOM05D004396 ORTHO05D005272 1.8e-44 182.6 116 83.6
Zm00001eb379050 Zea mays HOM05D004396 ORTHO05D005272 3.0e-44 181.8 116 83.6
Lj4g0004552 Lotus japonicus HOM05D004396 ORTHO05D005272 5.1e-44 181.0 116 79.3
Sabra01G0105900 Salix brachista HOM05D004396 ORTHO05D005272 5.1e-44 181.0 126 77.8
BolC3t13671H Brassica oleracea HOM05D004396 ORTHO05D005272 8.8e-44 180.3 200 56.5
Mapoly0046s0003 Marchantia polymorpha HOM05D004396 ORTHO05D005272 2.5e-43 178.7 112 80.4
Pp3c2_30990 Physcomitrium patens HOM05D004396 ORTHO05D005272 1.7e-42 176.0 113 74.3
SMO117G0136 Selaginella moellendorffii HOM05D004396 ORTHO05D005272 4.8e-42 174.5 109 80.7
Gohir.A03G000033 Gossypium hirsutum HOM05D004396 ORTHO05D005272 8.5e-39 163.7 101 85.1
BolC5t31884H Brassica oleracea HOM05D004396 ORTHO05D005272 1.1e-38 163.3 88 96.6
AagrBONN_evm.TU.Sc2ySwM_362.1218 Anthoceros agrestis HOM05D000444 ORTHO05D000489 1.2e-37 159.8 109 73.4
arahy.Tifrunner.gnm1.ann1.KG0UNZ Arachis hypogaea HOM05D004396 ORTHO05D005272 1.0e-36 156.8 89 91.0
Peaxi162Scf00045g00321 Petunia axillaris HOM05D004396 ORTHO05D005272 1.4e-36 156.4 89 85.4
Migut.E00744 Erythranthe guttata HOM05D004396 ORTHO05D005272 2.3e-36 155.6 88 90.9
Gohir.D03G176200 Gossypium hirsutum HOM05D004396 ORTHO05D005272 3.9e-36 154.8 117 76.1
AUR62036328 Chenopodium quinoa HOM05D004396 ORTHO05D005272 2.6e-35 152.1 88 89.8
CiPaw.12G068300 Carya illinoinensis HOM05D004396 ORTHO05D005272 8.2e-34 147.1 91 81.3
Sed0012676 Sechium edule HOM05D004396 ORTHO05D005272 3.1e-33 145.2 88 83.0
Ciclev10013120m.g Citrus clementina HOM05D004396 ORTHO05D005272 9.1e-33 143.7 102 75.5
Nn1g00212 Nelumbo nucifera HOM05D004396 ORTHO05D005272 1.3e-31 139.8 85 83.5
A08p09310 Brassica napus HOM05D004396 ORTHO05D005272 1.7e-31 139.4 105 71.4
BraA08t32929Z Brassica rapa HOM05D004396 ORTHO05D005272 1.7e-31 139.4 105 71.4
Cfa012506 Carpinus fangiana HOM05D004396 ORTHO05D005272 1.5e-30 136.3 81 85.2
MBI02_g15155_MAGBIO Magnolia biondii HOM05D004396 ORTHO05D005272 4.2e-30 134.8 72 90.3
CAN.G1987.1 Capsicum annuum HOM05D004396 ORTHO05D005272 1.6e-29 132.9 73 90.4
Psat2g139040 Pisum sativum HOM05D004396 ORTHO05D005272 6.1e-29 131.0 67 95.5
Aa31LG2G13800 Aethionema arabicum HOM05D004396 ORTHO05D005272 8.0e-29 130.6 83 84.3
Ah.02g116090 Amaranthus hybridus HOM05D002241 ORTHO05D002458 2.8e-26 122.1 73 89.0
Cre02.g108400 Chlamydomonas reinhardtii HOM05D004396 ORTHO05D005272 3.7e-26 121.7 106 52.8
Sc24g0004110 Simmondsia chinensis HOM05D004396 ORTHO05D005272 3.1e-25 118.6 73 86.3
CBR_g15971 Chara braunii HOM05D004396 ORTHO05D005272 2.0e-24 115.9 109 55.0
Atru.chr6.1524 Acer truncatum HOM05D004396 ORTHO05D005272 1.3e-23 113.2 86 72.1
FAN15G2154 Fragaria x ananassa HOM05D004396 ORTHO05D005272 5.5e-22 107.8 70 81.4
Pp3c1_6120 Physcomitrium patens HOM05D004396 ORTHO05D005272 5.5e-22 107.8 71 74.6
BolC8t47998H Brassica oleracea HOM05D004396 ORTHO05D005272 2.1e-21 105.9 107 61.7
Hund15006 Selenicereus undatus HOM05D004396 ORTHO05D005272 2.2e-15 85.9 61 73.8
C03p12000 Brassica napus HOM05D004396 ORTHO05D023989 6.5e-15 84.3 51 88.2
A09p33990 Brassica napus HOM05D004396 ORTHO05D005272 4.2e-14 81.6 45 95.6
C05p39130 Brassica napus HOM05D004396 ORTHO05D005272 2.1e-13 79.3 46 91.3
BolC5t32648H Brassica oleracea HOM05D004396 ORTHO05D005272 2.1e-13 79.3 46 91.3
TPR.G36203 Trifolium pratense HOM05D004396 ORTHO05D005272 1.2e-08 63.5 41 80.5
RcHm_v2.0_Chr6g0251331 Rosa chinensis HOM05D004396 ORTHO05D005272 7.7e-08 60.8 57 66.7
RcHm_v2.0_Chr6g0251311 Rosa chinensis HOM05D004396 ORTHO05D005272 5.0e-07 58.2 41 80.5


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