Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 2.3e-55 218.8 119 100.0
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 3.1e-52 208.4 119 93.3
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 1.2e-51 206.5 119 91.6
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 2.0e-51 205.7 119 91.6
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 3.4e-51 204.9 119 90.8
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 3.4e-51 204.9 119 90.8
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 3.4e-51 204.9 119 90.8
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 3.4e-51 204.9 119 90.8
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 3.4e-51 204.9 119 90.8
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 3.4e-51 204.9 119 91.6
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 2.2e-50 202.2 119 91.6
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 4.9e-50 201.1 117 90.6
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 4.6e-48 194.5 119 84.9
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 1.1e-44 183.3 119 82.4
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 2.6e-43 178.7 179 61.5
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.6e-43 178.7 103 90.3
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 5.4e-41 171.0 113 80.5
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.8e-39 166.0 113 75.2
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 1.8e-39 166.0 113 76.1
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.8e-39 166.0 112 77.7
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 5.1e-39 164.5 112 77.7
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 8.7e-39 163.7 112 74.1
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.5e-38 162.9 112 75.0
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 3.3e-38 161.8 113 75.2
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 3.3e-38 161.8 113 75.2
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 4.3e-38 161.4 117 69.2
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.6e-38 160.2 111 76.6
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.3e-37 159.8 111 75.7
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 1.3e-37 159.8 113 71.7
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.6e-37 159.5 119 69.7
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.6e-37 159.5 111 73.0
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 3.7e-37 158.3 110 76.4
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 6.2e-37 157.5 112 70.5
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 8.1e-37 157.1 110 70.9
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.4e-36 156.4 108 72.2
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 1.4e-36 156.4 107 73.8
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 1.4e-36 156.4 110 70.9
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 3.1e-36 155.2 113 72.6
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 5.3e-36 154.5 113 69.9
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 9.0e-36 153.7 113 70.8
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 9.0e-36 153.7 110 71.8
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 9.0e-36 153.7 111 72.1
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.2e-35 153.3 119 66.4
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 1.5e-35 152.9 113 71.7
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 2.0e-35 152.5 113 69.0
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 2.0e-35 152.5 112 71.4
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.0e-35 152.5 113 70.8
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 2.0e-35 152.5 110 71.8
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 2.0e-35 152.5 111 72.1
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 2.0e-35 152.5 110 70.9
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.6e-35 152.1 111 71.2
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 2.6e-35 152.1 110 72.7
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 3.4e-35 151.8 111 72.1
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 3.4e-35 151.8 113 69.0
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 4.5e-35 151.4 108 72.2
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 5.8e-35 151.0 110 70.9
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 5.8e-35 151.0 110 70.9
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 7.6e-35 150.6 110 70.9
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 1.0e-34 150.2 111 68.5
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.0e-34 150.2 113 66.4
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.0e-34 150.2 113 70.8
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 1.0e-34 150.2 105 75.2
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.7e-34 149.4 111 70.3
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.7e-34 149.4 113 69.0
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 2.2e-34 149.1 111 67.6
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 3.8e-34 148.3 111 71.2
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 4.9e-34 147.9 111 70.3
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 4.9e-34 147.9 112 67.9
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 6.5e-34 147.5 114 70.2
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 6.5e-34 147.5 111 67.6
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 8.4e-34 147.1 111 68.5
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.1e-33 146.7 110 70.9
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 1.4e-33 146.4 113 67.3
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 3.2e-33 145.2 111 68.5
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 5.5e-33 144.4 111 67.6
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 7.1e-33 144.1 111 68.5
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 9.3e-33 143.7 97 78.4
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 9.3e-33 143.7 110 70.9
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 2.7e-32 142.1 116 62.9
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 2.7e-32 142.1 107 68.2
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 7.9e-32 140.6 112 67.9
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 5.1e-31 137.9 113 64.6
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 1.9e-30 136.0 107 65.4
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 2.5e-30 135.6 111 62.2
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 2.8e-29 132.1 111 64.9
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 5.3e-28 127.9 118 61.9
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 1.5e-27 126.3 134 56.0
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 2.0e-27 125.9 99 67.7
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 4.5e-27 124.8 85 74.1
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 5.8e-27 124.4 89 70.8
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 7.6e-27 124.0 89 71.9
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 1.0e-26 123.6 83 74.7
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.0e-26 123.6 107 59.8
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.7e-26 122.9 85 71.8
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 2.2e-26 122.5 87 73.6
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.1e-25 120.2 79 78.5
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.9e-25 119.4 79 77.2
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 4.2e-25 118.2 85 68.2
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 9.3e-25 117.1 83 72.3
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.6e-24 116.3 84 70.2
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.1e-24 115.9 83 72.3
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 3.5e-24 115.2 84 69.0
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 7.9e-24 114.0 79 73.4
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 1.0e-23 113.6 81 74.1
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.3e-23 112.5 89 70.8
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.5e-22 109.0 79 72.2
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 8.2e-21 104.0 114 53.5
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 1.5e-19 99.8 70 74.3
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.5e-19 98.2 114 53.5
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.2e-18 95.9 79 65.8
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 8.5e-18 94.0 103 53.4
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.9e-17 92.8 64 75.0
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 5.1e-15 84.7 108 50.0
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 4.3e-14 81.6 52 78.8
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.4e-12 75.9 52 73.1
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 2.6e-11 72.4 59 64.4
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.0e-10 70.5 75 49.3
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.5e-09 65.9 60 63.3


User provided reference genes

Program Settings