Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 0.0e+00 1579.7 843 100.0
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 0.0e+00 1419.8 845 89.1
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 0.0e+00 1410.6 844 89.6
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 0.0e+00 1403.7 843 89.4
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 0.0e+00 1397.9 846 88.4
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 0.0e+00 1386.7 844 87.7
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 0.0e+00 1345.5 846 85.2
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 0.0e+00 1307.7 852 82.5
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 0.0e+00 1306.2 852 82.4
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 0.0e+00 1305.8 852 82.4
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 0.0e+00 1293.1 854 82.2
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 0.0e+00 1291.9 853 82.2
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 0.0e+00 1239.9 885 77.9
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 3.1e-300 1035.0 866 67.1
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 3.1e-255 885.6 830 60.4
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 4.0e-255 885.2 802 60.3
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 3.8e-253 878.6 854 58.4
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 4.1e-252 875.2 819 61.2
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.2e-251 873.6 850 58.9
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 3.5e-251 872.1 808 60.1
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 7.8e-251 870.9 850 58.6
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.0e-250 870.5 819 59.7
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 3.9e-250 868.6 852 57.6
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.5e-249 866.7 853 57.8
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.9e-249 866.3 864 57.2
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.3e-249 865.5 776 61.1
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.6e-248 863.2 860 58.4
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 3.6e-248 862.1 838 58.4
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.1e-247 860.5 842 58.4
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 2.4e-244 849.4 847 57.7
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.1e-243 846.3 880 55.6
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 6.0e-243 844.7 769 61.0
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 3.0e-242 842.4 813 58.8
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.9e-241 839.7 820 58.7
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.9e-241 839.7 752 61.0
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 7.3e-241 837.8 786 60.3
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 2.1e-240 836.3 860 55.3
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 3.6e-240 835.5 781 60.1
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 2.4e-239 832.8 775 59.0
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 1.4e-236 823.5 775 59.6
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.9e-236 823.2 812 57.8
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.6e-235 818.5 840 55.5
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 6.0e-235 818.1 846 56.4
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 4.3e-233 812.0 799 58.3
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 1.3e-232 810.4 799 57.1
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 7.6e-230 801.2 768 59.0
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 9.9e-230 800.8 781 57.9
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 8.4e-229 797.7 859 55.3
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.9e-228 796.6 805 56.3
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 3.5e-227 792.3 836 55.7
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 4.6e-227 792.0 789 57.3
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.0e-226 790.8 718 60.7
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.1e-225 787.3 805 56.1
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 8.2e-224 781.2 800 56.4
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 2.4e-223 779.6 774 55.8
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 9.0e-223 777.7 787 55.9
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 2.2e-221 773.1 752 58.2
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 6.5e-221 771.5 777 55.9
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.4e-220 770.4 792 55.4
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 1.9e-220 770.0 767 56.7
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.0e-218 762.7 757 56.0
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 8.2e-216 754.6 859 52.2
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.8e-215 753.4 780 54.9
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 2.0e-214 750.0 753 56.7
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.0e-214 750.0 781 54.2
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 5.9e-214 748.4 773 54.6
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 5.9e-214 748.4 778 55.4
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.2e-213 746.5 788 54.4
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 2.1e-211 740.0 807 53.9
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.7e-211 739.6 814 54.3
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 7.9e-211 738.0 771 54.3
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 6.7e-210 734.9 815 54.5
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 2.8e-208 729.6 757 54.6
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 1.1e-207 727.6 849 50.5
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 1.2e-206 724.2 820 51.8
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 5.9e-206 721.8 904 48.5
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.3e-202 709.9 670 61.0
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.4e-199 700.7 764 54.1
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.3e-197 694.1 810 52.1
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.7e-197 693.7 846 49.5
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.9e-194 682.6 765 53.2
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 8.2e-192 674.9 675 55.1
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 5.2e-186 655.6 775 50.1
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.1e-180 637.9 774 48.3
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 2.2e-176 623.6 786 45.0
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.1e-175 621.3 571 61.1
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.5e-174 616.3 791 47.2
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 8.0e-171 605.1 469 68.0
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.4e-161 572.8 461 65.9
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 6.0e-158 562.4 588 56.0
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 4.1e-151 539.7 558 53.6
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 9.2e-151 538.5 811 42.8
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 1.0e-149 535.0 595 52.3
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.0e-149 535.0 778 45.6
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.5e-148 531.2 676 47.8
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.4e-143 514.6 463 58.1
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 8.1e-139 498.8 564 52.7
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 4.0e-138 496.5 512 54.9
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 1.4e-135 488.0 513 54.4
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 1.3e-133 481.5 636 46.9
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 1.3e-112 411.8 863 37.7
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 8.2e-107 392.5 822 33.9
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 5.0e-88 330.1 371 47.7
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 3.3e-84 317.4 815 32.9
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.4e-74 285.4 215 68.8
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.3e-72 278.9 274 56.2
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.7e-72 278.5 292 54.1
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 1.4e-66 258.8 619 32.6
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.2e-64 251.5 210 59.5
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 8.8e-61 239.6 242 56.6
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 3.8e-56 224.2 202 58.9
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 7.2e-55 219.9 263 49.0
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 5.4e-50 203.8 853 25.1
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 1.8e-21 109.0 122 46.7
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 3.9e-16 91.3 146 42.5
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 1.3e-11 76.3 68 55.9
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 2.2e-11 75.5 110 45.5
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 1.1e-10 73.2 91 49.5
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 6.0e-09 67.4 120 38.3


User provided reference genes

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