Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.9e-153 545.8 272 100.0
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 1.7e-135 486.1 275 89.5
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 3.0e-135 485.3 275 89.1
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 4.3e-134 481.5 275 88.4
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 2.1e-133 479.2 275 87.6
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.3e-130 469.9 273 87.2
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 3.8e-130 468.4 276 85.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 4.6e-128 461.5 276 85.1
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 2.3e-127 459.1 276 84.8
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 6.7e-127 457.6 286 82.2
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 3.0e-111 405.6 278 75.9
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.4e-87 327.0 215 74.4
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.5e-86 323.6 216 69.4
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 4.4e-86 322.0 265 61.1
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 7.5e-86 321.2 207 72.5
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.4e-84 317.0 245 65.3
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 4.1e-84 315.5 215 70.2
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 9.1e-84 314.3 222 69.8
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 9.1e-84 314.3 207 71.0
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.7e-82 310.1 216 66.2
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 3.8e-82 308.9 216 68.1
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 3.8e-82 308.9 222 65.8
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 6.5e-82 308.1 261 58.2
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 8.5e-82 307.8 215 67.4
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 4.2e-81 305.4 233 62.2
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.2e-80 303.9 216 65.7
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 4.7e-80 302.0 222 63.1
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 6.1e-80 301.6 217 65.0
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 6.1e-80 301.6 246 61.0
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.4e-79 300.4 215 64.2
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 1.8e-79 300.1 206 68.9
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.3e-79 299.7 209 67.0
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 6.8e-79 298.1 217 66.4
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 6.8e-79 298.1 217 66.4
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.2e-78 297.4 204 69.6
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 7.5e-78 294.7 211 66.4
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 7.5e-78 294.7 217 64.1
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 9.8e-78 294.3 223 62.3
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.3e-77 293.9 231 62.8
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.7e-77 293.5 206 63.6
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.7e-77 293.5 212 63.2
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 6.3e-77 291.6 227 59.0
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.1e-76 290.8 206 66.0
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 4.1e-76 288.9 217 61.8
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 9.1e-76 287.7 233 61.8
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.6e-75 287.0 201 66.7
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 4.5e-75 285.4 245 58.8
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.3e-74 283.9 220 64.1
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.7e-74 283.5 249 57.4
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 5.0e-74 282.0 213 62.4
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 6.5e-74 281.6 230 61.7
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.1e-73 280.8 194 69.6
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.5e-73 280.4 220 63.6
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 3.2e-73 279.3 215 62.3
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 4.2e-73 278.9 220 61.4
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 7.2e-73 278.1 214 61.2
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 7.2e-73 278.1 206 61.2
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.6e-72 276.9 210 61.4
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 2.1e-72 276.6 220 63.6
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 1.8e-71 273.5 203 63.5
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 2.3e-71 273.1 238 57.1
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 3.0e-71 272.7 205 61.0
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 4.0e-71 272.3 261 52.1
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 6.8e-71 271.6 213 62.9
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.2e-70 270.8 283 51.2
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 3.4e-70 269.2 206 61.7
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 3.4e-70 269.2 204 63.2
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 1.7e-69 266.9 181 69.6
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.4e-68 263.8 212 59.4
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.4e-68 263.8 209 59.3
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 2.0e-67 260.0 181 66.9
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 7.7e-67 258.1 187 67.9
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 9.5e-65 251.1 214 56.1
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 2.8e-64 249.6 207 60.4
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 8.9e-63 244.6 173 69.4
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 3.4e-62 242.7 210 55.7
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 2.4e-60 236.5 231 52.4
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.6e-59 233.8 185 62.7
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 3.9e-58 229.2 228 50.4
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 8.6e-58 228.0 173 60.1
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 2.1e-56 223.4 221 52.5
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 4.0e-55 219.2 186 61.3
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.2e-54 217.6 273 44.3
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 4.4e-54 215.7 209 53.1
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 6.6e-50 201.8 141 68.8
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 7.3e-49 198.4 285 37.5
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 9.5e-49 198.0 197 48.2
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 2.3e-47 193.4 140 64.3
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 1.7e-45 187.2 235 43.0
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 8.3e-45 184.9 185 47.0
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 5.4e-36 155.6 161 52.8
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 9.2e-36 154.8 110 61.8
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 1.1e-31 141.4 104 62.5
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 1.5e-30 137.5 146 46.6
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 5.4e-28 129.0 212 36.3
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 7.8e-27 125.2 167 40.1
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 3.3e-25 119.8 125 49.6
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.1e-23 113.2 102 54.9
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 2.6e-22 110.2 208 38.0
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.2e-21 107.1 84 60.7
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.8e-18 97.4 80 57.5
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 2.1e-16 90.5 197 30.5
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 2.5e-09 67.0 40 70.0
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 3.7e-08 63.2 78 38.5
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 3.1e-07 60.1 40 55.0
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 1.2e-06 58.2 60 46.7


User provided reference genes

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