Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 7.4e-178 627.1 318 100.0
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 3.0e-163 578.6 316 92.4
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 1.3e-158 563.1 318 90.3
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 5.5e-157 557.8 318 89.3
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 1.6e-156 556.2 318 89.0
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 1.5e-154 549.7 318 87.7
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 9.8e-154 547.0 315 87.3
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 8.3e-153 543.9 315 86.7
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 2.4e-152 542.3 310 87.7
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 2.0e-151 539.3 315 86.3
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 2.7e-151 538.9 325 85.2
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 4.2e-149 531.6 319 85.3
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 1.4e-147 526.6 336 80.7
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 3.0e-147 525.4 320 84.4
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 5.0e-142 508.1 330 78.8
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 7.0e-136 487.6 296 82.8
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 2.1e-124 449.5 316 70.3
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 2.8e-124 449.1 315 70.5
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 2.6e-122 442.6 315 69.8
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 4.4e-122 441.8 315 69.8
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 7.5e-122 441.0 309 71.2
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 9.9e-122 440.7 313 69.3
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 5.4e-120 434.9 315 68.9
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 1.6e-119 433.3 309 68.9
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 2.7e-119 432.6 317 66.6
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 9.5e-117 424.1 308 67.9
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 2.1e-116 422.9 310 67.7
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 2.4e-115 419.5 311 65.9
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 3.1e-115 419.1 316 64.2
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 3.1e-115 419.1 303 67.0
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 4.0e-115 418.7 311 65.9
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 4.0e-115 418.7 309 66.7
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 5.2e-115 418.3 307 67.4
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 6.8e-115 417.9 311 65.9
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 6.8e-115 417.9 311 65.9
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 1.2e-114 417.2 313 65.8
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 1.2e-114 417.2 310 66.5
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.0e-114 416.4 303 66.7
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 4.4e-114 415.2 307 67.4
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 9.9e-114 414.1 306 67.3
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 9.9e-114 414.1 303 66.0
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 1.7e-113 413.3 307 67.4
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 2.9e-113 412.5 309 66.7
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 3.8e-113 412.1 316 64.9
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 6.4e-113 411.4 305 66.2
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 1.1e-112 410.6 304 65.5
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 2.4e-112 409.5 312 65.7
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 2.4e-112 409.5 316 64.9
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 2.4e-112 409.5 314 63.1
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 3.2e-112 409.1 312 64.1
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 5.4e-112 408.3 310 64.2
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 9.2e-112 407.5 303 65.0
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 1.2e-111 407.1 310 63.9
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 1.2e-111 407.1 311 64.3
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.6e-111 406.8 312 62.8
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 2.1e-111 406.4 304 65.8
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 4.6e-111 405.2 309 66.0
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 4.6e-111 405.2 310 64.5
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 4.6e-111 405.2 314 64.0
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 6.0e-111 404.8 306 66.0
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 1.3e-110 403.7 307 63.5
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 3.0e-110 402.5 308 65.3
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 3.0e-110 402.5 308 65.9
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 3.9e-110 402.1 313 64.5
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 3.9e-110 402.1 310 64.2
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 6.6e-110 401.4 308 65.3
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 6.6e-110 401.4 310 62.9
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 8.7e-110 401.0 305 64.6
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 1.1e-109 400.6 308 64.9
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 1.1e-109 400.6 317 63.1
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 1.5e-109 400.2 310 62.9
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 1.9e-109 399.8 308 64.6
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 1.9e-109 399.8 308 65.3
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 3.3e-109 399.1 307 63.2
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 9.6e-109 397.5 306 63.7
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.2e-108 397.1 311 62.7
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 1.2e-108 397.1 301 64.8
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 1.2e-108 397.1 310 62.3
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.1e-108 396.4 338 60.1
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 2.1e-108 396.4 305 65.2
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 2.1e-108 396.4 308 63.3
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 2.8e-108 396.0 325 60.9
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 8.1e-108 394.4 332 59.9
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 1.4e-107 393.7 332 59.9
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 2.4e-107 392.9 330 60.6
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 9.0e-107 391.0 270 69.6
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 1.5e-106 390.2 310 62.3
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 2.0e-106 389.8 271 69.7
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 2.0e-106 389.8 308 61.7
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 3.4e-106 389.0 335 60.0
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 7.6e-106 387.9 308 62.0
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 7.6e-106 387.9 311 61.7
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 1.1e-104 384.0 353 56.1
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 1.1e-104 384.0 307 62.9
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.9e-104 383.3 375 54.4
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 1.2e-103 380.6 312 59.0
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 1.2e-103 380.6 306 63.4
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 1.6e-103 380.2 275 66.9
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 4.6e-103 378.6 276 66.3
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 1.3e-102 377.1 311 63.0
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 6.6e-102 374.8 277 66.4
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 1.1e-101 374.0 272 68.8
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.5e-101 372.9 338 55.9
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 8.1e-100 367.9 284 64.1
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 8.4e-97 357.8 287 63.1
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 2.4e-96 356.3 307 58.6
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 5.4e-96 355.1 202 87.6
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 2.1e-95 353.2 306 58.8
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 2.1e-95 353.2 317 56.5
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.0e-94 349.4 312 57.7
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 3.9e-94 349.0 252 67.5
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.5e-93 347.1 306 58.2
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 5.6e-93 345.1 301 57.8
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 1.6e-92 343.6 307 56.7
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 1.8e-91 340.1 241 66.4
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 3.1e-91 339.3 309 57.6
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 3.1e-91 339.3 313 56.5
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 1.2e-90 337.4 302 54.6
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 2.0e-90 336.7 317 57.1
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 3.4e-90 335.9 310 55.5
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 4.5e-90 335.5 189 89.9
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 3.2e-88 329.3 309 54.4
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 1.0e-86 324.3 234 65.8
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 1.5e-82 310.5 256 59.8
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 2.0e-82 310.1 174 90.8
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 1.3e-78 297.4 226 65.9
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 5.7e-77 292.0 315 48.9
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 1.4e-75 287.3 231 61.0
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 8.5e-73 278.1 313 49.2
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 3.6e-71 272.7 300 48.7
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.1e-69 267.7 445 38.9
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 5.1e-62 242.3 184 64.7
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 1.5e-61 240.7 163 70.6
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 1.7e-60 237.3 311 45.0
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 2.8e-60 236.5 302 44.7
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 5.9e-58 228.8 273 48.4
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 7.7e-58 228.4 210 56.7
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 1.9e-56 223.8 173 64.7
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 1.0e-54 218.0 221 50.7
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 1.5e-53 214.2 171 62.0
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 1.7e-52 210.7 214 52.3
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 3.7e-52 209.5 192 52.6
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 3.1e-51 206.5 286 41.6
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 2.6e-50 203.4 233 46.8
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 3.5e-50 203.0 164 64.0
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 7.7e-50 201.8 227 48.0
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 1.2e-47 194.5 137 68.6
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 2.1e-47 193.7 147 63.3
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 1.0e-46 191.4 132 70.5
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 8.8e-46 188.3 304 42.4
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 2.6e-45 186.8 140 64.3
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 3.3e-45 186.4 165 55.8
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 4.5e-42 176.0 119 70.6
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.3e-41 174.5 195 49.2
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 2.9e-41 173.3 115 72.2
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 2.6e-37 160.2 167 47.9
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 2.8e-36 156.8 149 56.4
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 2.0e-34 150.6 181 47.5
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 6.8e-30 135.6 106 62.3
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 4.4e-29 132.9 151 50.3
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 4.9e-28 129.4 113 60.2
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 2.8e-23 113.6 116 51.7
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 3.1e-22 110.2 116 54.3
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 3.5e-18 96.7 62 72.6
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 8.0e-15 85.5 81 54.3
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 3.4e-13 80.1 81 51.9
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 9.8e-13 78.6 45 77.8
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 6.4e-12 75.9 90 43.3
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.9e-11 74.3 104 43.3
Ah.05g170600 Amaranthus hybridus HOM05D003898 ORTHO05D004642 4.1e-11 73.2 75 49.3
QL08p011560 Quercus lobata HOM05D003898 ORTHO05D004642 1.9e-08 64.3 62 53.2
QL10p009819 Quercus lobata HOM05D003898 ORTHO05D004642 1.9e-08 64.3 62 53.2
Atru.chr5.2810 Acer truncatum HOM05D003898 ORTHO05D004642 2.1e-07 60.8 54 53.7


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