Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s0982 Capsella rubella HOM05D001713 ORTHO05D013456 3.8e-69 264.6 124 100.0
Aa31LG1G5160 Aethionema arabicum HOM05D001713 ORTHO05D001669 3.5e-22 108.6 122 43.4
QL08p058986 Quercus lobata HOM05D001713 ORTHO05D001669 4.7e-11 71.6 124 32.3
AL1G21240 Arabidopsis lyrata HOM05D011773 ORTHO05D013456 1.0e-10 70.5 121 36.4
Carub.0004s1534 Capsella rubella HOM05D001713 ORTHO05D001669 1.4e-10 70.1 125 37.6
BraA05t20129Z Brassica rapa HOM05D001713 ORTHO05D001669 4.0e-10 68.6 136 33.1
AL5G19040 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 5.2e-10 68.2 127 36.2
Carub.0002s2549 Capsella rubella HOM05D001713 ORTHO05D001669 3.4e-09 65.5 115 35.7
A05p11880 Brassica napus HOM05D001713 ORTHO05D001669 4.4e-09 65.1 134 32.1
FAN19G2268 Fragaria x ananassa HOM05D001713 ORTHO05D001669 7.5e-09 64.3 122 27.9
QL02p074400 Quercus lobata HOM05D001713 ORTHO05D001669 9.8e-09 63.9 125 32.0
Haze_03476 Corylus avellana HOM05D001713 ORTHO05D001669 1.3e-08 63.5 124 33.1
QL02p075052 Quercus lobata HOM05D001713 ORTHO05D001669 1.7e-08 63.2 121 29.8
Cfa016920 Carpinus fangiana HOM05D001713 ORTHO05D001669 2.2e-08 62.8 124 33.1
AT1G78640 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 2.8e-08 62.4 116 32.8
BolC4t23116H Brassica oleracea HOM05D001713 ORTHO05D001669 2.8e-08 62.4 126 34.1
Haze_08779 Corylus avellana HOM05D000141 ORTHO05D001860 3.7e-08 62.0 125 31.2
Haze_08778 Corylus avellana HOM05D001713 ORTHO05D001669 4.9e-08 61.6 122 31.1
Haze_09859 Corylus avellana HOM05D003572 ORTHO05D004118 4.9e-08 61.6 123 31.7
BcaB01g03921 Brassica carinata HOM05D001713 ORTHO05D001669 8.3e-08 60.8 124 32.3
Cfa012228 Carpinus fangiana HOM05D001713 ORTHO05D001669 1.1e-07 60.5 122 32.0
Duzib264G0660 Durio zibethinus HOM05D001713 ORTHO05D001669 1.4e-07 60.1 113 32.7
AL3G51850 Arabidopsis lyrata HOM05D011773 ORTHO05D013456 1.8e-07 59.7 116 30.2
BcaC02g11447 Brassica carinata HOM05D001713 ORTHO05D001669 1.8e-07 59.7 134 30.6
Haze_09851 Corylus avellana HOM05D001713 ORTHO05D001669 1.8e-07 59.7 124 32.3
Cfa010546 Carpinus fangiana HOM05D001713 ORTHO05D001669 2.4e-07 59.3 124 32.3
PGR031G2861 Punica granatum HOM05D001713 ORTHO05D001669 3.1e-07 58.9 114 30.7
Cfa010548 Carpinus fangiana HOM05D001713 ORTHO05D001669 4.1e-07 58.5 124 32.3
Thhalv10022043m.g Eutrema salsugineum HOM05D011773 ORTHO05D013456 4.1e-07 58.5 109 33.0
Sp4g16060 Schrenkiella parvula HOM05D001713 ORTHO05D001669 5.4e-07 58.2 125 31.2
QL08p058979 Quercus lobata HOM05D001713 ORTHO05D001669 9.2e-07 57.4 120 30.0
THA.LOC109116201 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 9.2e-07 57.4 125 34.4
A05p35910 Brassica napus HOM05D008434 ORTHO05D011150 1.2e-06 57.0 111 29.7
BraA03t12174Z Brassica rapa HOM05D008434 ORTHO05D011150 1.2e-06 57.0 111 29.7
BraA05t22397Z Brassica rapa HOM05D008434 ORTHO05D011150 1.2e-06 57.0 111 29.7
A03p29840 Brassica napus HOM05D008434 ORTHO05D011150 1.6e-06 56.6 111 29.7
BcaC01g05828 Brassica carinata HOM05D001713 ORTHO05D001669 2.0e-06 56.2 125 31.2
COL.COLO4_24578 Corchorus olitorius HOM05D001713 ORTHO05D001669 2.0e-06 56.2 125 28.8
Duzib268G1296 Durio zibethinus HOM05D001713 ORTHO05D001669 2.0e-06 56.2 122 32.8
Gorai.011G050500 Gossypium raimondii HOM05D001713 ORTHO05D001669 3.5e-06 55.5 112 32.1
CARHR072160 Cardamine hirsuta HOM05D001713 ORTHO05D001669 4.5e-06 55.1 125 31.2
Gohir.A10G046150 Gossypium hirsutum HOM05D001713 ORTHO05D001669 4.5e-06 55.1 112 31.2
C03p22010 Brassica napus HOM05D001713 ORTHO05D001669 5.9e-06 54.7 125 31.2


User provided reference genes

Program Settings