Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s0930 Capsella rubella HOM05D004775 ORTHO05D005351 3.5e-117 424.9 198 100.0
CARHR009970 Cardamine hirsuta HOM05D004775 ORTHO05D005351 5.2e-113 411.0 198 96.0
AL1G20520 Arabidopsis lyrata HOM05D004775 ORTHO05D005351 4.4e-112 407.9 198 97.0
AT1G09920 Arabidopsis thaliana HOM05D004775 ORTHO05D005351 1.5e-107 392.9 198 94.4
BolC8t48959H Brassica oleracea HOM05D004775 ORTHO05D005351 6.2e-106 387.5 197 90.4
BcaC07g38533 Brassica carinata HOM05D004775 ORTHO05D005351 1.1e-105 386.7 197 90.4
BraA08t35340Z Brassica rapa HOM05D004775 ORTHO05D005351 3.1e-105 385.2 197 89.8
Thhalv10008829m.g Eutrema salsugineum HOM05D004775 ORTHO05D005351 3.1e-105 385.2 194 92.8
A08p34290 Brassica napus HOM05D004775 ORTHO05D005351 5.2e-105 384.4 197 89.3
BolC5t29556H Brassica oleracea HOM05D004775 ORTHO05D005351 2.0e-104 382.5 197 90.4
BcaC05g24832 Brassica carinata HOM05D004775 ORTHO05D005351 2.6e-104 382.1 197 87.8
Sp1g08560 Schrenkiella parvula HOM05D004775 ORTHO05D005351 9.8e-104 380.2 193 91.7
C08p13270 Brassica napus HOM05D004775 ORTHO05D005351 1.5e-99 366.3 184 91.3
C05p08040 Brassica napus HOM05D004775 ORTHO05D005351 6.8e-97 357.5 181 91.2
A06p06630 Brassica napus HOM05D004775 ORTHO05D005351 7.6e-96 354.0 181 89.5
BraA06t23877Z Brassica rapa HOM05D004775 ORTHO05D005351 7.6e-96 354.0 181 89.5
THA.LOC104823690 Tarenaya hassleriana HOM05D004775 ORTHO05D005351 3.7e-95 351.7 197 81.7
Aa31LG1G4980 Aethionema arabicum HOM05D000583 ORTHO05D000442 1.9e-94 349.4 195 82.6
THA.LOC104816787 Tarenaya hassleriana HOM05D004775 ORTHO05D005351 1.6e-90 336.3 195 79.5
Gohir.A01G125800 Gossypium hirsutum HOM05D004775 ORTHO05D005351 5.8e-80 301.2 191 71.7
COL.COLO4_35296 Corchorus olitorius HOM05D004775 ORTHO05D005351 7.6e-80 300.8 191 72.3
Atru.chr13.955 Acer truncatum HOM05D004775 ORTHO05D005351 2.9e-79 298.9 197 70.6
Thecc.08G074700 Theobroma cacao HOM05D004775 ORTHO05D005351 6.4e-79 297.7 191 72.8
Gohir.D01G113700 Gossypium hirsutum HOM05D004775 ORTHO05D005351 1.9e-78 296.2 191 70.7
Gorai.002G138100 Gossypium raimondii HOM05D004775 ORTHO05D005351 1.9e-78 296.2 191 70.7
Duzib093G0042 Durio zibethinus HOM05D004775 ORTHO05D005351 7.1e-78 294.3 191 70.7
Duzib116G0735 Durio zibethinus HOM05D004775 ORTHO05D005351 1.2e-77 293.5 191 69.6
TWI56G0975 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 1.2e-77 293.5 196 70.9
Gohir.D05G220600 Gossypium hirsutum HOM05D004775 ORTHO05D005351 1.6e-77 293.1 191 70.7
CsaV3_3G048130 Cucumis sativus L. HOM05D004775 ORTHO05D005351 2.1e-77 292.7 197 70.6
MELO3C003503.2 Cucumis melo HOM05D004775 ORTHO05D005351 2.7e-77 292.4 197 70.6
Gohir.A05G216900 Gossypium hirsutum HOM05D004775 ORTHO05D005351 2.7e-77 292.4 191 70.7
MD15G1389500 Malus domestica HOM05D004775 ORTHO05D005351 2.7e-77 292.4 197 70.1
Duzib041G0637 Durio zibethinus HOM05D004775 ORTHO05D005351 3.5e-77 292.0 211 65.9
Gohir.A06G030500 Gossypium hirsutum HOM05D004775 ORTHO05D005351 3.5e-77 292.0 197 69.0
TWI12G1154 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 6.0e-77 291.2 191 71.2
Potri.002G109800 Populus trichocarpa HOM05D004775 ORTHO05D005351 7.9e-77 290.8 191 70.2
QL12p039787 Quercus lobata HOM05D004775 ORTHO05D005351 1.3e-76 290.0 194 70.1
Gorai.010G032800 Gossypium raimondii HOM05D004775 ORTHO05D005351 1.7e-76 289.7 197 68.0
Prupe.1G538600 Prunus persica HOM05D004775 ORTHO05D005351 1.7e-76 289.7 191 70.7
Gohir.D06G029800 Gossypium hirsutum HOM05D004775 ORTHO05D005351 3.9e-76 288.5 197 68.0
TWI36G1537 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 8.7e-76 287.3 191 70.2
Ciclev10002525m.g Citrus clementina HOM05D004775 ORTHO05D005351 1.5e-75 286.6 196 68.4
Manes.18G057500 Manihot esculenta HOM05D004775 ORTHO05D005351 1.9e-75 286.2 189 71.4
CANSAT25G1480 Cannabis sativa HOM05D004775 ORTHO05D005351 2.5e-75 285.8 195 66.2
LjContig00408g0019215 Lotus japonicus HOM05D004775 ORTHO05D005351 2.5e-75 285.8 196 65.8
PGR042G0432 Punica granatum HOM05D004775 ORTHO05D005351 2.5e-75 285.8 193 67.4
CiPaw.07G162400 Carya illinoinensis HOM05D004775 ORTHO05D005351 1.6e-74 283.1 191 68.6
MSTRG.24993 Avicennia marina HOM05D004775 ORTHO05D005351 2.1e-74 282.7 197 64.5
Sed0023619 Sechium edule HOM05D004775 ORTHO05D005351 2.8e-74 282.3 196 67.3
Sed0025083 Sechium edule HOM05D004775 ORTHO05D005351 3.6e-74 282.0 196 67.9
Actinidia10268 Actinidia chinensis HOM05D004775 ORTHO05D005351 8.1e-74 280.8 193 67.4
TPR.G27047 Trifolium pratense HOM05D004775 ORTHO05D005351 8.1e-74 280.8 197 65.5
Ca_15537_v3 Cicer arietinum L. HOM05D000583 ORTHO05D000442 2.4e-73 279.3 194 65.5
Gorai.009G227600 Gossypium raimondii HOM05D004775 ORTHO05D005351 2.4e-73 279.3 191 69.6
MSTRG.932 Avicennia marina HOM05D004775 ORTHO05D005351 5.3e-73 278.1 188 67.6
Migut.C00072 Erythranthe guttata HOM05D004775 ORTHO05D005351 5.3e-73 278.1 201 63.2
Lalb_Chr17g0344651 Lupinus albus HOM05D004775 ORTHO05D005351 9.0e-73 277.3 189 64.6
Dinv42587 Davidia involucrata HOM05D004775 ORTHO05D005351 2.0e-72 276.2 191 66.5
Medtr3g111440 Medicago truncatula HOM05D004775 ORTHO05D005351 2.6e-72 275.8 195 65.1
Peaxi162Scf00962g00039 Petunia axillaris HOM05D004775 ORTHO05D005351 3.4e-72 275.4 191 66.0
Nitab4.5_0018050g0020 Nicotiana tabacum HOM05D004775 ORTHO05D005351 5.8e-72 274.6 195 66.2
Glyma.02G216500 Glycine max HOM05D004775 ORTHO05D005351 2.2e-71 272.7 197 62.9
Glyma.14G183500 Glycine max HOM05D004775 ORTHO05D005351 2.9e-71 272.3 196 62.8
Lalb_Chr11g0064841 Lupinus albus HOM05D004775 ORTHO05D005351 2.9e-71 272.3 191 63.9
TAR381G0646 Trochodendron aralioides HOM05D004775 ORTHO05D005351 2.9e-71 272.3 191 63.9
CSS0014871 Camellia sinensis var. sinensis HOM05D004775 ORTHO05D005351 3.8e-71 271.9 197 64.0
CAN.G1104.13 Capsicum annuum HOM05D004775 ORTHO05D005351 8.4e-71 270.8 192 65.1
Psat2g064440 Pisum sativum HOM05D004775 ORTHO05D005351 8.4e-71 270.8 201 61.2
RcHm_v2.0_Chr7g0233601 Rosa chinensis HOM05D004775 ORTHO05D005351 8.4e-71 270.8 191 64.9
Cc10_g08310 Coffea canephora HOM05D004775 ORTHO05D005351 1.4e-70 270.0 191 65.4
Solyc04g076670.3 Solanum lycopersicum HOM05D004775 ORTHO05D005351 1.4e-70 270.0 189 67.2
Sopen04g030390 Solanum pennellii HOM05D004775 ORTHO05D005351 1.4e-70 270.0 189 67.2
Nitab4.5_0003184g0020 Nicotiana tabacum HOM05D004775 ORTHO05D005351 1.9e-70 269.6 191 67.5
Hma1.2p1_0125F.1_g058660 Hydrangea macrophylla HOM05D004775 ORTHO05D005351 4.2e-70 268.5 194 67.0
MD08G1206200 Malus domestica HOM05D004775 ORTHO05D005351 4.2e-70 268.5 181 69.1
Aqoxy6G00652 Aquilegia oxysepala HOM05D004775 ORTHO05D005351 7.1e-70 267.7 191 62.8
Oeu038164.1 Olea europaea HOM05D004775 ORTHO05D005351 1.2e-69 266.9 189 65.1
Cpa.g.sc177.17 Carica papaya HOM05D004775 ORTHO05D005351 1.6e-69 266.5 187 66.3
Psat0s3268g0200 Pisum sativum HOM05D004775 ORTHO05D005351 3.5e-69 265.4 197 63.5
arahy.Tifrunner.gnm1.ann1.ZY5S91 Arachis hypogaea HOM05D004775 ORTHO05D005351 7.9e-69 264.2 185 64.9
CAN.G723.7 Capsicum annuum HOM05D004775 ORTHO05D005351 1.3e-68 263.5 189 65.6
FAN08G1925 Fragaria x ananassa HOM05D004775 ORTHO05D005351 1.3e-68 263.5 186 64.0
FAN18G1173 Fragaria x ananassa HOM05D004775 ORTHO05D005351 2.3e-68 262.7 186 63.4
unitig_8.g4905 Utricularia gibba HOM05D004775 ORTHO05D005351 2.3e-68 262.7 185 63.8
Solyc12g088070.2 Solanum lycopersicum HOM05D004775 ORTHO05D005351 3.9e-68 261.9 195 60.5
Medtr5g066840 Medicago truncatula HOM05D004775 ORTHO05D005351 6.7e-68 261.2 192 60.4
TAR625G1011 Trochodendron aralioides HOM05D004775 ORTHO05D005351 6.7e-68 261.2 190 60.5
Nn5g29801 Nelumbo nucifera HOM05D004775 ORTHO05D005351 1.9e-67 259.6 189 63.0
FAN04G2969 Fragaria x ananassa HOM05D004775 ORTHO05D005351 3.3e-67 258.8 191 62.3
Sc26g0003070 Simmondsia chinensis HOM05D004775 ORTHO05D005351 5.6e-67 258.1 191 58.6
TPR.G12363 Trifolium pratense HOM05D004775 ORTHO05D005351 5.6e-67 258.1 197 60.4
DCAR_020031 Daucus carota HOM05D004775 ORTHO05D005351 7.4e-67 257.7 194 61.3
Sopen12g030090 Solanum pennellii HOM05D004775 ORTHO05D005351 7.4e-67 257.7 195 60.5
BcaB03g13545 Brassica carinata HOM05D004775 ORTHO05D005351 1.3e-66 256.9 132 89.4
Ca_05476_v3 Cicer arietinum L. HOM05D004775 ORTHO05D005351 2.8e-66 255.8 190 61.1
Ca_30556_v3 Cicer arietinum L. HOM05D004775 ORTHO05D005351 2.8e-66 255.8 190 61.1
PSO532G0015 Papaver somniferum HOM05D004775 ORTHO05D005351 3.7e-66 255.4 191 61.3
PSO541G5225 Papaver somniferum HOM05D004775 ORTHO05D005351 3.7e-66 255.4 191 60.7
Sabra02G0086400 Salix brachista HOM05D004775 ORTHO05D005351 1.4e-65 253.4 269 49.1
PSO541G4289 Papaver somniferum HOM05D004775 ORTHO05D005351 4.0e-65 251.9 191 60.7
ECA246G4228 Erigeron canadensis HOM05D004775 ORTHO05D005351 1.5e-64 250.0 184 64.1
unitig_578.g16108 Utricularia gibba HOM05D004775 ORTHO05D005351 2.0e-64 249.6 183 66.7
CAN.G1104.12 Capsicum annuum HOM05D004775 ORTHO05D005351 9.3e-62 240.7 189 58.2
HanXRQChr02g0046001 Helianthus annuus HOM05D004775 ORTHO05D005351 1.0e-60 237.3 187 57.8
Lsat_1_v5_gn_6_107340 Lactuca sativa HOM05D004775 ORTHO05D005351 1.0e-60 237.3 179 63.1
ECA247G3351 Erigeron canadensis HOM05D004775 ORTHO05D005351 1.8e-60 236.5 198 58.1
GSVIVG01009216001 Vitis vinifera HOM05D004775 ORTHO05D005351 3.0e-60 235.7 203 58.1
Dinv44879 Davidia involucrata HOM05D000583 ORTHO05D000442 1.1e-59 233.8 184 59.8
Zm00001eb017320 Zea mays HOM05D004775 ORTHO05D005351 1.3e-58 230.3 198 55.1
Actinidia19256 Actinidia chinensis HOM05D004775 ORTHO05D005351 2.1e-58 229.6 144 68.8
Phvul.009G145000 Phaseolus vulgaris HOM05D004775 ORTHO05D005351 1.1e-57 227.3 191 57.6
GSVIVG01009218001 Vitis vinifera HOM05D004775 ORTHO05D005351 1.2e-56 223.8 204 54.9
ClCG11G014720 Citrullus lanatus HOM05D004775 ORTHO05D005351 1.5e-56 223.4 158 67.7
vmacro21362 Vaccinium macrocarpon HOM05D004775 ORTHO05D005351 1.5e-56 223.4 269 46.1
ATR0800G163 Amborella trichopoda HOM05D004775 ORTHO05D005351 5.9e-56 221.5 124 74.2
Glyma.06G092700 Glycine max HOM05D004775 ORTHO05D005351 1.3e-55 220.3 194 55.7
Phvul.008G183600 Phaseolus vulgaris HOM05D004775 ORTHO05D005351 2.9e-55 219.2 153 65.4
CDE02G4408 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 4.2e-54 215.3 185 54.1
Solyc12g088060.2 Solanum lycopersicum HOM05D004775 ORTHO05D005351 2.1e-53 213.0 138 63.0
CDE01G0193 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 3.5e-53 212.2 183 54.6
PGSC0003DMG402002053 Solanum tuberosum HOM05D004775 ORTHO05D005351 1.3e-52 210.3 191 52.4
Nitab4.5_0000354g0090 Nicotiana tabacum HOM05D004775 ORTHO05D005351 1.8e-52 209.9 171 59.6
Zm00001eb110680 Zea mays HOM05D004775 ORTHO05D005351 1.8e-52 209.9 198 50.0
Zm00001eb394470 Zea mays HOM05D004775 ORTHO05D005351 6.7e-52 208.0 186 53.8
EL10Ac1g00475 Beta vulgaris HOM05D004775 ORTHO05D005351 1.5e-51 206.8 197 50.8
SEGI_14572 Sequoiadendron giganteum HOM05D004775 ORTHO05D005351 3.3e-51 205.7 199 47.7
Nitab4.5_0000885g0090 Nicotiana tabacum HOM05D004775 ORTHO05D005351 1.3e-50 203.8 181 55.8
Lsat_1_v5_gn_1_840 Lactuca sativa HOM05D004775 ORTHO05D005351 1.6e-50 203.4 206 50.5
Eucgr.F00443 Eucalyptus grandis HOM05D004775 ORTHO05D005351 2.4e-49 199.5 192 51.6
BcaC07g41856 Brassica carinata HOM05D004775 ORTHO05D005351 4.1e-49 198.7 196 55.6
BolC8t52458H Brassica oleracea HOM05D000348 ORTHO05D000244 4.1e-49 198.7 196 55.6
Os03g0356652 Oryza sativa ssp. japonica HOM05D004775 ORTHO05D005351 4.1e-49 198.7 191 50.8
BraA09t41874Z Brassica rapa HOM05D000348 ORTHO05D000244 9.0e-49 197.6 196 54.6
MBI16_g12296_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 1.1e-46 190.7 153 57.5
HanXRQChr05g0163501 Helianthus annuus HOM05D004775 ORTHO05D005351 7.2e-46 188.0 158 58.2
HanXRQChr10g0277731 Helianthus annuus HOM05D004775 ORTHO05D005351 1.2e-45 187.2 153 58.2
unitig_37.g13069 Utricularia gibba HOM05D000316 ORTHO05D005351 1.2e-45 187.2 181 49.2
Os07g0657500 Oryza sativa ssp. japonica HOM05D004775 ORTHO05D005351 6.1e-45 184.9 182 46.2
VMungo1309G0719 Vigna mungo HOM05D004775 ORTHO05D005351 1.8e-44 183.3 175 52.0
Hund17253 Selenicereus undatus HOM05D004775 ORTHO05D005351 2.3e-44 183.0 182 48.4
VMungo0647G0779 Vigna mungo HOM05D004775 ORTHO05D005351 8.8e-44 181.0 129 65.9
Hma1.2p1_0010F.1_g006440 Hydrangea macrophylla HOM05D004775 ORTHO05D005351 8.2e-42 174.5 136 62.5
Nn1g05655 Nelumbo nucifera HOM05D004775 ORTHO05D005351 8.2e-42 174.5 103 67.0
Mapoly0004s0283 Marchantia polymorpha HOM05D004775 ORTHO05D005351 3.1e-41 172.6 199 43.2
Haze_22493 Corylus avellana HOM05D004775 ORTHO05D005351 4.1e-41 172.2 184 50.5
FvH4_5g34100 Fragaria vesca HOM05D004775 ORTHO05D005351 4.1e-41 172.2 136 61.0
AUR62014379 Chenopodium quinoa HOM05D004775 ORTHO05D005351 7.7e-40 167.9 192 47.9
AUR62019121 Chenopodium quinoa HOM05D004775 ORTHO05D005351 2.9e-39 166.0 192 46.4
Manes.12G122400 Manihot esculenta HOM05D004775 ORTHO05D005351 6.1e-37 158.3 188 42.0
Sopen12g030080 Solanum pennellii HOM05D000583 ORTHO05D000442 6.1e-37 158.3 147 51.0
SGA_v2.0_scaffold74G24544 Striga asiatica HOM05D004775 ORTHO05D005351 4.4e-27 125.6 186 37.6
MBI05_g43456_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 5.9e-24 115.2 87 55.2
MBI10_g33158_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 4.2e-22 109.0 86 54.7
vmacro22764 Vaccinium macrocarpon HOM05D004775 ORTHO05D005351 7.7e-16 88.2 72 56.9
MELO3C018834.2 Cucumis melo HOM05D006348 ORTHO05D008261 2.2e-15 86.7 162 30.9
ClCG02G002100 Citrullus lanatus HOM05D006348 ORTHO05D008261 1.1e-14 84.3 158 29.7
EL10Ac5g11991 Beta vulgaris HOM05D006348 ORTHO05D008261 4.2e-14 82.4 163 29.4
Lalb_Chr17g0347351 Lupinus albus HOM05D006348 ORTHO05D008261 2.1e-13 80.1 151 29.8
Dinv08741 Davidia involucrata HOM05D006348 ORTHO05D008261 3.0e-12 76.3 157 30.6
SGA_v2.0_scaffold159G37573 Striga asiatica HOM05D006348 ORTHO05D008261 4.0e-12 75.9 154 29.9
CDE09G1141 Ceratophyllum demersum HOM05D006348 ORTHO05D008261 5.2e-12 75.5 154 29.2
Dinv36973 Davidia involucrata HOM05D004775 ORTHO05D005351 6.8e-12 75.1 150 34.7
Nn1g03434 Nelumbo nucifera HOM05D006348 ORTHO05D008261 1.5e-11 73.9 154 29.2
CDE07G0871 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 2.6e-11 73.2 56 51.8
Pp3c3_2100 Physcomitrium patens HOM05D006348 ORTHO05D008261 2.0e-08 63.5 152 27.0
Medtr3g099560 Medicago truncatula HOM05D004775 ORTHO05D005351 5.9e-08 62.0 39 66.7
Zm00001eb329620 Zea mays HOM05D004775 ORTHO05D005351 8.6e-07 58.2 92 33.7
Glyma.04G091000 Glycine max HOM05D004775 ORTHO05D005351 7.3e-06 55.1 51 58.8


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