Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 2.2e-163 578.9 300 100.0
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 4.4e-148 528.1 300 90.7
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 3.2e-146 521.9 302 91.4
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 2.8e-142 508.8 300 89.7
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 1.4e-138 496.5 303 85.1
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 1.9e-138 496.1 286 87.8
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 2.0e-132 476.1 299 82.6
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 2.9e-131 472.2 288 84.0
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 3.8e-131 471.9 287 84.3
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.0e-128 463.8 288 82.3
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 2.3e-128 462.6 287 83.6
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 6.6e-128 461.1 289 83.7
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 1.3e-123 446.8 278 83.1
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 1.3e-120 436.8 289 76.1
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 5.3e-117 424.9 265 79.2
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 1.2e-105 387.1 289 68.2
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 4.6e-105 385.2 288 69.1
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 1.0e-104 384.0 288 68.8
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 6.7e-104 381.3 288 68.4
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 2.2e-102 376.3 289 68.2
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 4.8e-102 375.2 289 68.2
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 1.1e-101 374.0 289 67.8
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 5.3e-101 371.7 289 65.4
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 9.0e-101 370.9 288 66.0
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 9.0e-101 370.9 289 66.8
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 5.9e-100 368.2 289 66.4
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 1.0e-99 367.5 286 65.0
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 2.9e-99 365.9 288 64.2
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 6.5e-99 364.8 287 65.9
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 1.1e-98 364.0 288 64.6
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.1e-98 364.0 288 65.6
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.5e-98 362.8 287 65.2
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 2.5e-98 362.8 286 64.3
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 2.5e-98 362.8 286 62.9
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 4.2e-98 362.1 285 65.3
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 7.2e-98 361.3 287 64.1
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.7e-97 359.4 287 64.8
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 3.6e-97 359.0 244 72.5
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 3.6e-97 359.0 286 65.0
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 6.1e-97 358.2 291 64.3
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 3.0e-96 355.9 289 64.7
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 1.1e-95 354.0 286 63.6
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 3.3e-95 352.4 289 63.3
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 5.7e-95 351.7 286 62.2
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.7e-94 350.1 287 62.0
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 2.2e-94 349.7 286 63.3
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 2.2e-94 349.7 293 64.2
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 3.7e-94 349.0 289 63.0
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 3.7e-94 349.0 287 62.7
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 4.8e-94 348.6 288 62.8
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 1.4e-93 347.1 290 64.8
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 2.4e-93 346.3 272 65.1
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 3.1e-93 345.9 290 64.5
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.1e-93 345.9 267 67.0
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 6.9e-93 344.7 289 62.6
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 9.1e-93 344.4 291 62.9
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 3.4e-92 342.4 287 64.5
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 4.5e-92 342.0 285 60.0
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 5.9e-92 341.7 296 61.8
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 2.2e-91 339.7 300 62.0
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 3.8e-91 339.0 286 60.1
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 2.5e-90 336.3 287 59.6
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 4.2e-90 335.5 297 56.9
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 5.5e-90 335.1 297 59.3
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 7.2e-90 334.7 293 61.4
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 1.6e-89 333.6 303 59.7
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 2.1e-89 333.2 288 60.4
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 3.9e-88 328.9 301 59.8
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 5.1e-88 328.6 287 60.6
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 5.7e-87 325.1 249 67.5
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 1.3e-86 323.9 288 59.7
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 4.8e-86 322.0 298 58.4
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 1.1e-85 320.9 257 65.0
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 4.1e-85 318.9 300 56.3
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 7.0e-85 318.2 222 69.8
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 9.1e-85 317.8 222 69.8
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 1.2e-84 317.4 289 57.8
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 1.6e-84 317.0 222 69.8
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 5.9e-84 315.1 245 66.9
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 7.7e-84 314.7 291 57.0
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 1.0e-83 314.3 293 58.4
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 1.7e-83 313.5 267 62.5
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 8.5e-83 311.2 218 70.2
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.9e-82 310.1 259 63.3
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 7.2e-82 308.1 313 57.5
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 1.2e-81 307.4 285 56.1
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 3.6e-81 305.8 287 57.5
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.8e-80 303.5 219 68.9
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 4.0e-80 302.4 269 61.3
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 5.2e-80 302.0 269 59.1
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 1.7e-78 297.0 312 52.6
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.4e-77 293.9 256 58.2
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 9.1e-77 291.2 286 55.9
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 5.9e-76 288.5 290 54.1
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 1.0e-75 287.7 242 59.1
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.1e-74 284.3 288 55.6
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 9.4e-74 281.2 240 67.5
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.4e-72 277.3 300 53.7
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 3.7e-70 269.2 268 53.4
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 5.9e-68 261.9 224 57.1
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 1.3e-67 260.8 298 46.6
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 2.2e-67 260.0 184 69.0
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 1.1e-66 257.7 263 55.5
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.5e-66 257.3 222 54.5
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 4.7e-65 252.3 228 54.4
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 5.7e-63 245.4 175 69.1
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 9.8e-63 244.6 239 54.4
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.8e-61 240.4 175 65.1
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 4.5e-60 235.7 291 45.4
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 2.3e-59 233.4 245 46.9
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.5e-58 229.9 273 49.8
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 3.0e-56 223.0 316 44.6
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 1.3e-54 217.6 168 68.5
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 1.1e-53 214.5 186 55.4
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 1.5e-50 204.1 260 46.2
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 3.4e-39 166.4 112 70.5
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 1.3e-38 164.5 230 43.9
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 2.4e-37 160.2 135 63.7
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 2.5e-34 150.2 223 38.1
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 2.3e-32 143.7 130 60.0
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 7.6e-31 138.7 78 83.3
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 7.6e-31 138.7 78 82.1
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 6.4e-30 135.6 78 82.1
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 1.4e-29 134.4 112 59.8
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 6.0e-28 129.0 79 81.0
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 7.8e-28 128.6 196 37.2
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 1.8e-24 117.5 80 76.2
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 2.0e-23 114.0 83 66.3
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 1.1e-18 98.2 104 51.9
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.5e-18 97.8 104 51.0
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.5e-18 97.8 104 51.0
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 5.6e-18 95.9 104 50.0
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 7.3e-18 95.5 104 50.0
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 2.8e-17 93.6 52 90.4
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 1.1e-16 91.7 143 32.2
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 9.0e-16 88.6 197 29.4
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 1.3e-11 74.7 102 43.1
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 6.7e-11 72.4 56 62.5
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 3.3e-10 70.1 130 36.9
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 1.6e-09 67.8 54 63.0
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 6.2e-09 65.9 60 58.3
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 4.5e-07 59.7 211 27.5


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