Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s0737 Capsella rubella HOM05D000452 ORTHO05D005748 4.0e-290 1000.7 509 100.0
AT1G08030 Arabidopsis thaliana HOM05D000452 ORTHO05D005748 1.6e-254 882.5 502 88.2
AL1G18360 Arabidopsis lyrata HOM05D000452 ORTHO05D005748 2.7e-254 881.7 502 88.6
CARHR007800 Cardamine hirsuta HOM05D000452 ORTHO05D005748 3.3e-236 821.6 493 84.8
Thhalv10007441m.g Eutrema salsugineum HOM05D000452 ORTHO05D005748 7.3e-236 820.5 502 83.7
BcaC05g24718 Brassica carinata HOM05D000452 ORTHO05D005748 9.3e-231 803.5 504 82.3
BolC5t29365H Brassica oleracea HOM05D000452 ORTHO05D005748 9.3e-231 803.5 504 82.3
BraA06t23716Z Brassica rapa HOM05D000452 ORTHO05D005748 2.4e-226 788.9 503 80.5
Sp1g06650 Schrenkiella parvula HOM05D000452 ORTHO05D005748 7.1e-223 777.3 502 79.7
BcaB02g06693 Brassica carinata HOM05D000452 ORTHO05D005748 3.1e-218 761.9 496 79.4
A06p05090 Brassica napus HOM05D000452 ORTHO05D005748 1.7e-216 756.1 446 85.2
C05p06050 Brassica napus HOM05D000452 ORTHO05D005748 2.3e-213 745.7 447 85.5
BraA08t35443Z Brassica rapa HOM05D000452 ORTHO05D005748 8.2e-211 737.3 503 76.7
A08p35370 Brassica napus HOM05D000452 ORTHO05D005748 9.0e-210 733.8 504 76.6
BcaB03g13356 Brassica carinata HOM05D000452 ORTHO05D005748 2.1e-206 722.6 503 75.1
BolC8t47149H Brassica oleracea HOM05D000452 ORTHO05D005748 3.9e-205 718.4 506 74.9
C08p03470 Brassica napus HOM05D000452 ORTHO05D005748 8.7e-205 717.2 506 74.9
THA.LOC104826371 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 1.5e-204 716.5 495 74.7
THA.LOC104800598 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 1.1e-196 690.3 494 72.5
Aa31sc122G10 Aethionema arabicum HOM05D000452 ORTHO05D005748 2.0e-193 679.5 469 74.8
MELO3C004897.2 Cucumis melo HOM05D000452 ORTHO05D005748 2.4e-154 549.7 503 58.8
MD11G1137500 Malus domestica HOM05D000452 ORTHO05D005748 2.4e-154 549.7 502 59.6
Manes.04G019700 Manihot esculenta HOM05D000452 ORTHO05D005748 3.1e-154 549.3 502 57.2
TWI31G0927 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 5.4e-154 548.5 501 58.7
CANSAT54G2994 Cannabis sativa HOM05D000452 ORTHO05D005748 7.0e-154 548.1 507 58.8
MD03G1119900 Malus domestica HOM05D000452 ORTHO05D005748 9.2e-154 547.7 503 59.0
Thecc.09G342400 Theobroma cacao HOM05D000452 ORTHO05D005748 1.7e-152 543.5 498 57.4
Potri.009G011400 Populus trichocarpa HOM05D000452 ORTHO05D005748 8.6e-152 541.2 484 58.5
ClCG01G013590 Citrullus lanatus HOM05D000452 ORTHO05D005748 1.1e-151 540.8 497 58.4
Sed0009159 Sechium edule HOM05D000452 ORTHO05D005748 1.1e-151 540.8 504 58.5
CiPaw.13G114400 Carya illinoinensis HOM05D000452 ORTHO05D005748 1.9e-151 540.0 483 59.6
Prupe.6G103100 Prunus persica HOM05D000452 ORTHO05D005748 1.9e-151 540.0 524 56.9
Gohir.A03G032800 Gossypium hirsutum HOM05D000452 ORTHO05D005748 5.6e-151 538.5 504 57.3
Lj3g0027876 Lotus japonicus HOM05D000452 ORTHO05D005748 7.3e-151 538.1 499 57.3
RcHm_v2.0_Chr5g0058721 Rosa chinensis HOM05D000452 ORTHO05D005748 7.3e-151 538.1 508 57.9
Gorai.003G142700 Gossypium raimondii HOM05D000452 ORTHO05D005748 9.5e-151 537.7 498 56.2
COL.COLO4_18319 Corchorus olitorius HOM05D000452 ORTHO05D002419 1.6e-150 537.0 497 56.3
Lalb_Chr01g0004351 Lupinus albus HOM05D000452 ORTHO05D005748 6.1e-150 535.0 486 57.4
FAN21G3667 Fragaria x ananassa HOM05D000452 ORTHO05D005748 8.0e-150 534.6 485 58.4
FvH4_3g31960 Fragaria vesca HOM05D000452 ORTHO05D005748 1.0e-149 534.3 485 58.4
FAN11G0834 Fragaria x ananassa HOM05D000452 ORTHO05D005748 1.0e-149 534.3 485 58.4
Glyma.11G145300 Glycine max HOM05D000452 ORTHO05D005748 1.4e-149 533.9 492 56.5
Gohir.D03G135600 Gossypium hirsutum HOM05D000452 ORTHO05D005748 3.0e-149 532.7 499 55.9
Medtr4g058890 Medicago truncatula HOM05D000452 ORTHO05D005748 5.2e-149 531.9 505 56.2
CsaV3_1G013960 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.2e-148 530.8 487 57.1
arahy.Tifrunner.gnm1.ann1.I1PATR Arachis hypogaea HOM05D000452 ORTHO05D005748 2.0e-148 530.0 475 58.1
TWI79G0017 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 3.4e-148 529.3 503 57.1
Haze_23811 Corylus avellana HOM05D000452 ORTHO05D005748 4.4e-148 528.9 517 56.1
GSVIVG01025200001 Vitis vinifera HOM05D000452 ORTHO05D005748 4.4e-148 528.9 499 56.9
arahy.Tifrunner.gnm1.ann1.S7ZFT4 Arachis hypogaea HOM05D000452 ORTHO05D005748 1.3e-147 527.3 480 57.3
Peaxi162Scf00270g00311 Petunia axillaris HOM05D000452 ORTHO05D005748 1.3e-147 527.3 482 56.0
FAN25G3410 Fragaria x ananassa HOM05D000452 ORTHO05D005748 1.7e-147 526.9 487 57.7
PSO339G2396 Papaver somniferum HOM05D000452 ORTHO05D005748 2.9e-147 526.2 487 55.9
Phvul.011G080300 Phaseolus vulgaris HOM05D000452 ORTHO05D005748 6.4e-147 525.0 491 57.4
Nitab4.5_0005742g0010 Nicotiana tabacum HOM05D000452 ORTHO05D005748 1.4e-146 523.9 481 56.5
Hma1.2p1_0307F.1_g119780 Hydrangea macrophylla HOM05D000452 ORTHO05D005748 3.2e-146 522.7 506 55.5
arahy.Tifrunner.gnm1.ann1.AXM315 Arachis hypogaea HOM05D000452 ORTHO05D005748 4.1e-146 522.3 480 56.5
Lalb_Chr19g0137171 Lupinus albus HOM05D000452 ORTHO05D005748 2.7e-145 519.6 514 53.5
Migut.D02233 Erythranthe guttata HOM05D000452 ORTHO05D005748 3.5e-145 519.2 488 56.6
CSS0006947 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D005748 1.3e-144 517.3 502 55.8
CsaV3_1G013970 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.7e-144 516.9 504 55.6
TAR636G2205 Trochodendron aralioides HOM05D000452 ORTHO05D005748 2.3e-144 516.5 485 57.3
Nitab4.5_0000602g0100 Nicotiana tabacum HOM05D000452 ORTHO05D005748 3.9e-144 515.8 481 55.3
MSTRG.21118 Avicennia marina HOM05D000452 ORTHO05D005748 5.0e-144 515.4 491 55.4
Cfa011305 Carpinus fangiana HOM05D000452 ORTHO05D005748 5.0e-144 515.4 425 61.9
VMungo1127G0723 Vigna mungo HOM05D000452 ORTHO05D005748 6.6e-144 515.0 497 55.9
HanXRQChr01g0019321 Helianthus annuus HOM05D000452 ORTHO05D005748 3.6e-142 509.2 481 56.3
CsaV3_1G013990 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.8e-141 506.9 504 54.8
arahy.Tifrunner.gnm1.ann1.WEDN33 Arachis hypogaea HOM05D000452 ORTHO05D005748 2.3e-141 506.5 485 55.9
Eucgr.B02508 Eucalyptus grandis HOM05D000452 ORTHO05D005748 2.3e-141 506.5 501 55.3
Ciclev10028288m.g Citrus clementina HOM05D000452 ORTHO05D005748 5.2e-141 505.4 499 54.1
QL01p021907 Quercus lobata HOM05D000452 ORTHO05D005748 5.2e-141 505.4 588 49.1
Actinidia03722 Actinidia chinensis HOM05D000452 ORTHO05D005748 8.9e-141 504.6 452 57.3
Rhsim13G0095000 Rhododendron simsii HOM05D000452 ORTHO05D005748 1.2e-140 504.2 489 54.8
Sopen11g028230 Solanum pennellii HOM05D000452 ORTHO05D005748 1.5e-140 503.8 484 55.4
Solyc11g069520.2 Solanum lycopersicum HOM05D000452 ORTHO05D005748 2.6e-140 503.1 484 55.2
Oeu030194.1 Olea europaea HOM05D000452 ORTHO05D005748 4.4e-140 502.3 479 56.2
PGSC0003DMG400008083 Solanum tuberosum HOM05D000452 ORTHO05D005748 9.8e-140 501.1 484 54.8
DCAR_022745 Daucus carota HOM05D000452 ORTHO05D005748 1.1e-138 497.7 449 55.7
AUR62042196 Chenopodium quinoa HOM05D000452 ORTHO05D005748 4.1e-138 495.7 435 59.1
Cc01_g11000 Coffea canephora HOM05D000452 ORTHO05D005748 4.1e-138 495.7 508 52.4
TAR633G0246 Trochodendron aralioides HOM05D000452 ORTHO05D005748 4.1e-138 495.7 494 54.3
vmacro03204 Vaccinium macrocarpon HOM05D000452 ORTHO05D005748 4.1e-138 495.7 494 54.3
AUR62024960 Chenopodium quinoa HOM05D000452 ORTHO05D005748 2.1e-137 493.4 448 57.6
HanXRQChr07g0195801 Helianthus annuus HOM05D000452 ORTHO05D005748 2.1e-137 493.4 495 52.9
Sc06g0010310 Simmondsia chinensis HOM05D000452 ORTHO05D005748 7.8e-137 491.5 425 59.3
Aqoxy1G01223 Aquilegia oxysepala HOM05D000452 ORTHO05D005748 3.9e-136 489.2 448 57.1
Nn2g10818 Nelumbo nucifera HOM05D000452 ORTHO05D005748 8.6e-136 488.0 493 53.3
Psat7g192440 Pisum sativum HOM05D000452 ORTHO05D005748 8.6e-136 488.0 494 54.5
Cpa.g.sc279.1 Carica papaya HOM05D000452 ORTHO05D005748 1.9e-135 486.9 435 58.4
EL10Ac9g22533 Beta vulgaris HOM05D000452 ORTHO05D005748 5.6e-135 485.3 459 55.3
ECA248G3240 Erigeron canadensis HOM05D000452 ORTHO05D005748 2.8e-134 483.0 495 52.3
Oeu014003.1 Olea europaea HOM05D000452 ORTHO05D005748 8.1e-134 481.5 464 53.9
SGA_v2.0_scaffold180G39657 Striga asiatica HOM05D000452 ORTHO05D005748 2.3e-133 479.9 469 54.2
PGR102G2372 Punica granatum HOM05D000452 ORTHO05D005748 2.6e-132 476.5 509 52.3
Zm00001eb271200 Zea mays HOM05D000452 ORTHO05D005748 8.3e-131 471.5 506 53.2
ECA238G2818 Erigeron canadensis HOM05D000452 ORTHO05D005748 1.9e-130 470.3 476 52.1
Zm00001eb376480 Zea mays HOM05D000452 ORTHO05D005748 3.5e-129 466.1 440 56.1
CDE02G3238 Ceratophyllum demersum HOM05D000452 ORTHO05D005748 1.5e-127 460.7 472 51.9
Lj2C1024T12 Lonicera japonica HOM05D000452 ORTHO05D005748 4.3e-127 459.1 433 53.6
PSO384G2013 Papaver somniferum HOM05D000452 ORTHO05D005748 1.2e-126 457.6 447 54.1
Lsat_1_v5_gn_1_64080 Lactuca sativa HOM05D000452 ORTHO05D005748 3.1e-125 453.0 418 56.0
PSO339G5930 Papaver somniferum HOM05D000452 ORTHO05D005748 8.9e-125 451.4 437 54.0
Dinv02128 Davidia involucrata HOM05D000452 ORTHO05D005748 2.6e-124 449.9 487 51.5
SEGI_04235 Sequoiadendron giganteum HOM05D000452 ORTHO05D005748 5.8e-124 448.7 508 49.0
Oeu037301.1 Olea europaea HOM05D000452 ORTHO05D005748 3.2e-122 443.0 499 48.9
unitig_736.g22410 Utricularia gibba HOM05D000452 ORTHO05D005748 1.7e-120 437.2 523 48.0
Ca_19270_v3 Cicer arietinum L. HOM05D000452 ORTHO05D005748 5.1e-120 435.6 499 49.7
ATR0048G028 Amborella trichopoda HOM05D000452 ORTHO05D005748 5.8e-116 422.2 436 53.0
TPR.G6153 Trifolium pratense HOM05D000452 ORTHO05D005748 5.8e-116 422.2 494 49.4
CiPaw.14G081900 Carya illinoinensis HOM05D000452 ORTHO05D005748 3.8e-115 419.5 452 51.8
Lsat_1_v5_gn_2_100281 Lactuca sativa HOM05D000452 ORTHO05D005748 6.6e-112 408.7 428 50.7
PSO063G2649 Papaver somniferum HOM05D000452 ORTHO05D005748 6.2e-110 402.1 406 52.7
CsaV3_1G013980 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.4e-109 401.0 493 48.3
Lj1C203G7 Lonicera japonica HOM05D000452 ORTHO05D005748 1.4e-109 401.0 429 50.6
MBI07_g26020_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 3.4e-108 396.4 424 50.9
HPP92_008616 Vanilla planifolia HOM05D000452 ORTHO05D005748 8.4e-107 391.7 308 62.0
Atru.chr3.3611 Acer truncatum HOM05D000452 ORTHO05D005748 6.4e-99 365.5 452 48.0
Oeu001281.1 Olea europaea HOM05D000452 ORTHO05D005748 1.4e-98 364.4 396 52.0
Mapoly0061s0093 Marchantia polymorpha HOM05D000452 ORTHO05D005748 1.0e-96 358.2 470 43.8
Peaxi162Scf00034g00107 Petunia axillaris HOM05D000452 ORTHO05D005748 3.3e-95 353.2 480 43.3
SalBow3G4114 Salvia bowleyana HOM05D000452 ORTHO05D005748 4.3e-95 352.8 334 54.2
Lsat_1_v5_gn_9_37660 Lactuca sativa HOM05D000452 ORTHO05D005748 8.4e-91 338.6 308 55.8
Hund08167 Selenicereus undatus HOM05D000452 ORTHO05D005748 5.5e-90 335.9 365 52.1
RhsimUnG0046400 Rhododendron simsii HOM05D000452 ORTHO05D005748 8.7e-88 328.6 457 43.3
AagrBONN_evm.TU.Sc2ySwM_117.3844 Anthoceros agrestis HOM05D000452 ORTHO05D005748 9.7e-87 325.1 503 40.0
Pp3c16_24250 Physcomitrium patens HOM05D000452 ORTHO05D005748 1.4e-85 321.2 409 44.0
Lsat_1_v5_gn_2_91861 Lactuca sativa HOM05D000452 ORTHO05D005748 6.5e-83 312.4 304 53.9
SMO134G0053 Selaginella moellendorffii HOM05D000452 ORTHO05D005748 7.9e-73 278.9 292 49.3
DCAR_018802 Daucus carota HOM05D000452 ORTHO05D005748 3.9e-72 276.6 290 49.3
SHI19559 Sapria himalayana HOM05D000452 ORTHO05D005748 3.9e-72 276.6 225 60.4
CBR_g51944 Chara braunii HOM05D000452 ORTHO05D005748 4.8e-70 269.6 482 34.9
Dinv01781 Davidia involucrata HOM05D000452 ORTHO05D005748 1.5e-63 248.1 173 68.2
MBI10_g19822_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 7.4e-63 245.7 312 47.4
Os06g0158200 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D005748 1.3e-62 245.0 170 69.4
Dinv32733 Davidia involucrata HOM05D000452 ORTHO05D005748 1.6e-57 228.0 237 54.0
TPR.G26833 Trifolium pratense HOM05D000452 ORTHO05D005748 7.5e-47 192.6 132 67.4
PRCOL_00001963 Prasinoderma coloniale HOM05D000452 ORTHO05D005748 2.3e-43 181.0 441 29.9
Lsat_1_v5_gn_5_88800 Lactuca sativa HOM05D000452 ORTHO05D005748 5.5e-42 176.4 189 51.3
Cre01.g022600 Chlamydomonas reinhardtii HOM05D000452 ORTHO05D005748 2.4e-37 161.0 291 33.0
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 2.0e-36 157.9 84 86.9
Lsat_1_v5_gn_3_50740 Lactuca sativa HOM05D000452 ORTHO05D005748 1.4e-29 135.2 145 53.1
SHI19558 Sapria himalayana HOM05D000452 ORTHO05D000031 2.4e-29 134.4 201 36.8
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 5.6e-26 123.2 77 75.3
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 9.5e-26 122.5 73 78.1
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 4.7e-25 120.2 73 76.7
Hund08166 Selenicereus undatus HOM05D000452 ORTHO05D005748 2.6e-23 114.4 77 67.5
MD11G1150200 Malus domestica HOM05D000452 ORTHO05D005748 2.4e-21 107.8 80 60.0
MBI15_g38533_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 4.7e-17 93.6 124 47.6
HPP92_008615 Vanilla planifolia HOM05D000452 ORTHO05D005748 1.4e-16 92.0 145 39.3
C07p54990 Brassica napus HOM05D000452 ORTHO05D005748 5.8e-15 86.7 46 82.6
BcaC02g07555 Brassica carinata HOM05D000452 ORTHO05D005748 7.6e-15 86.3 78 56.4
Lsat_1_v5_gn_4_22460 Lactuca sativa HOM05D000344 ORTHO05D005714 4.3e-10 70.5 57 61.4
PRCOL_00002815 Prasinoderma coloniale HOM05D000452 ORTHO05D333388 5.2e-08 63.5 391 24.8


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