Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31316_v3 Cicer arietinum L. HOM05D004734 ORTHO05D006019 2.0e-53 212.2 112 100.0
Ca_06065_v3 Cicer arietinum L. HOM05D004734 ORTHO05D001394 1.6e-34 149.4 86 89.5
Ca_06067_v3 Cicer arietinum L. HOM05D004734 ORTHO05D006019 7.9e-34 147.1 106 79.2
Medtr5g084830 Medicago truncatula HOM05D004734 ORTHO05D006019 5.1e-33 144.4 83 89.2
TPR.G25656 Trifolium pratense HOM05D004734 ORTHO05D006019 1.5e-32 142.9 83 90.4
Lalb_Chr10g0105531 Lupinus albus HOM05D004734 ORTHO05D006019 3.3e-32 141.7 83 86.7
Psat2g026760 Pisum sativum HOM05D004734 ORTHO05D006019 5.7e-32 141.0 83 89.2
TPR.G6822 Trifolium pratense HOM05D004734 ORTHO05D006019 5.7e-32 141.0 83 89.2
Glyma.14G050700 Glycine max HOM05D004734 ORTHO05D006019 7.4e-32 140.6 80 87.5
Glyma.02G266800 Glycine max HOM05D004734 ORTHO05D006019 3.7e-31 138.3 83 85.5
Psat0s1468g0080 Pisum sativum HOM05D004734 ORTHO05D006019 3.7e-31 138.3 83 88.0
Psat0s1468g0040 Pisum sativum HOM05D004734 ORTHO05D006019 1.8e-30 136.0 83 86.7
Psat1g135920 Pisum sativum HOM05D004734 ORTHO05D006019 1.8e-30 136.0 83 85.5
LjContig00029g0002265 Lotus japonicus HOM05D004734 ORTHO05D006019 4.1e-30 134.8 83 83.1
Phvul.008G215200 Phaseolus vulgaris HOM05D004734 ORTHO05D006019 5.3e-30 134.4 83 84.3
Thecc.01G184100 Theobroma cacao HOM05D004734 ORTHO05D006019 5.0e-28 127.9 85 71.8
Duzib138G1622 Durio zibethinus HOM05D004734 ORTHO05D006019 1.9e-27 125.9 85 72.9
arahy.Tifrunner.gnm1.ann1.L0FFGY Arachis hypogaea HOM05D004734 ORTHO05D006019 3.2e-27 125.2 83 75.9
Gohir.D07G174400 Gossypium hirsutum HOM05D004734 ORTHO05D006019 4.2e-27 124.8 85 72.9
VMungo0647G1710 Vigna mungo HOM05D004734 ORTHO05D006019 5.5e-27 124.4 83 80.7
GSVIVG01030526001 Vitis vinifera HOM05D004734 ORTHO05D006019 7.2e-27 124.0 99 67.7
arahy.Tifrunner.gnm1.ann1.LYY30L Arachis hypogaea HOM05D004734 ORTHO05D006019 1.2e-26 123.2 79 77.2
Gohir.A07G168100 Gossypium hirsutum HOM05D004734 ORTHO05D006019 1.2e-26 123.2 85 74.1
Atru.chr6.3273 Acer truncatum HOM05D004734 ORTHO05D006019 1.6e-26 122.9 80 76.2
Atru.chr6.3288 Acer truncatum HOM05D004734 ORTHO05D006019 1.6e-26 122.9 80 76.2
Nitab4.5_0009060g0010 Nicotiana tabacum HOM05D004734 ORTHO05D006019 4.7e-26 121.3 100 65.0
Cfa014305 Carpinus fangiana HOM05D004734 ORTHO05D006019 1.4e-25 119.8 80 73.8
MD17G1107900 Malus domestica HOM05D004734 ORTHO05D006019 1.4e-25 119.8 91 65.9
Prupe.3G208500 Prunus persica HOM05D004734 ORTHO05D006019 1.4e-25 119.8 80 73.8
Ciclev10014379m.g Citrus clementina HOM05D004734 ORTHO05D006019 1.8e-25 119.4 85 70.6
Gorai.001G195000 Gossypium raimondii HOM05D004734 ORTHO05D006019 1.8e-25 119.4 85 70.6
Hma1.2p1_2840F.1_g329320 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 1.8e-25 119.4 85 72.9
QL01p037797 Quercus lobata HOM05D004734 ORTHO05D006019 1.8e-25 119.4 80 73.8
CAN.G387.3 Capsicum annuum HOM05D004734 ORTHO05D006019 3.0e-25 118.6 97 66.0
Nitab4.5_0000006g0360 Nicotiana tabacum HOM05D004734 ORTHO05D006019 3.0e-25 118.6 100 64.0
Peaxi162Scf00977g00315 Petunia axillaris HOM05D004734 ORTHO05D006019 3.0e-25 118.6 95 68.4
Solyc05g043350.4 Solanum lycopersicum HOM05D004734 ORTHO05D006019 3.9e-25 118.2 100 64.0
Dinv39761 Davidia involucrata HOM05D004734 ORTHO05D006019 5.2e-25 117.9 79 74.7
FvH4_6g41900 Fragaria vesca HOM05D004734 ORTHO05D006019 5.2e-25 117.9 89 66.3
FAN14G4409 Fragaria x ananassa HOM05D004734 ORTHO05D006019 5.2e-25 117.9 89 66.3
Haze_12752 Corylus avellana HOM05D004734 ORTHO05D006019 6.7e-25 117.5 80 71.2
Hma1.2p1_2840F.1_g329330 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 6.7e-25 117.5 80 76.2
Sopen05g026560 Solanum pennellii HOM05D004734 ORTHO05D006019 8.8e-25 117.1 100 64.0
FAN09G1456 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.1e-24 116.7 89 65.2
MD09G1116200 Malus domestica HOM05D004734 ORTHO05D006019 1.1e-24 116.7 77 75.3
RcHm_v2.0_Chr2g0157781 Rosa chinensis HOM05D004734 ORTHO05D006019 1.1e-24 116.7 89 65.2
Dinv08709 Davidia involucrata HOM05D004734 ORTHO05D006019 2.6e-24 115.5 80 72.5
Hma1.2p1_0445F.1_g154190 Hydrangea macrophylla HOM05D004734 ORTHO05D006019 4.4e-24 114.8 98 64.3
PGSC0003DMG400019206 Solanum tuberosum HOM05D004734 ORTHO05D006019 4.4e-24 114.8 104 61.5
CSS0018671 Camellia sinensis var. sinensis HOM05D004734 ORTHO05D006019 5.7e-24 114.4 92 64.1
FAN02G4553 Fragaria x ananassa HOM05D004734 ORTHO05D006019 5.7e-24 114.4 89 67.4
CiPaw.04G108800 Carya illinoinensis HOM05D004734 ORTHO05D006019 7.4e-24 114.0 80 70.0
FAN05G4875 Fragaria x ananassa HOM05D004734 ORTHO05D006019 1.7e-23 112.8 87 65.5
CANSAT64G0097 Cannabis sativa HOM05D004734 ORTHO05D006019 2.2e-23 112.5 87 66.7
SalBow7G0507 Salvia bowleyana HOM05D004734 ORTHO05D006019 2.2e-23 112.5 97 61.9
Actinidia09755 Actinidia chinensis HOM05D004734 ORTHO05D006019 2.8e-23 112.1 90 65.6
Nn1g07321 Nelumbo nucifera HOM05D004734 ORTHO05D006019 3.7e-23 111.7 76 72.4
Manes.12G058300 Manihot esculenta HOM05D004734 ORTHO05D006019 4.8e-23 111.3 87 66.7
TWI75G1245 Tripterygium wilfordii HOM05D004734 ORTHO05D006019 6.3e-23 110.9 85 64.7
AUR62015114 Chenopodium quinoa HOM05D004734 ORTHO05D006019 2.4e-22 109.0 83 65.1
EL10Ac9g22816 Beta vulgaris HOM05D004734 ORTHO05D006019 3.1e-22 108.6 90 62.2
DCAR_012916 Daucus carota HOM05D004734 ORTHO05D006019 4.1e-22 108.2 79 68.4
Potri.002G223600 Populus trichocarpa HOM05D004734 ORTHO05D006019 4.1e-22 108.2 80 68.8
AUR62017577 Chenopodium quinoa HOM05D004734 ORTHO05D006019 5.3e-22 107.8 80 65.0
PGR042G3679 Punica granatum HOM05D004734 ORTHO05D006019 5.3e-22 107.8 80 68.8
MELO3C019721.2 Cucumis melo HOM05D004734 ORTHO05D006019 7.0e-22 107.5 80 71.2
CsaV3_6G015550 Cucumis sativus L. HOM05D004734 ORTHO05D006019 7.0e-22 107.5 80 71.2
Cc00_g21460 Coffea canephora HOM05D004734 ORTHO05D006019 9.1e-22 107.1 79 69.6
THA.LOC104826129 Tarenaya hassleriana HOM05D004734 ORTHO05D006019 9.1e-22 107.1 93 60.2
ClCG02G018160 Citrullus lanatus HOM05D004734 ORTHO05D006019 1.2e-21 106.7 80 71.2
Oeu054514.1 Olea europaea HOM05D004734 ORTHO05D006019 1.2e-21 106.7 80 68.8
Sabra02G0171200 Salix brachista HOM05D004734 ORTHO05D006019 1.2e-21 106.7 80 67.5
Sed0026816 Sechium edule HOM05D004734 ORTHO05D006019 1.2e-21 106.7 80 71.2
Ah.01g001840 Amaranthus hybridus HOM05D004734 ORTHO05D006019 2.6e-21 105.5 80 63.8
Aqoxy2G03788 Aquilegia oxysepala HOM05D004734 ORTHO05D006019 2.6e-21 105.5 85 60.0
Migut.A01159 Erythranthe guttata HOM05D004734 ORTHO05D006019 2.6e-21 105.5 80 67.5
AT2G32900 Arabidopsis thaliana HOM05D004734 ORTHO05D006019 3.5e-21 105.1 90 62.2
Sc21g0001080 Simmondsia chinensis HOM05D004734 ORTHO05D006019 4.5e-21 104.8 86 65.1
ATR1128G058 Amborella trichopoda HOM05D004734 ORTHO05D006019 5.9e-21 104.4 88 59.1
Lj8A131T30 Lonicera japonica HOM05D004734 ORTHO05D006019 7.7e-21 104.0 79 69.6
Aa31LG5G4570 Aethionema arabicum HOM05D004734 ORTHO05D006019 3.8e-20 101.7 84 64.3
A05p12730 Brassica napus HOM05D004734 ORTHO05D006019 3.8e-20 101.7 80 66.2
TAR629G0221 Trochodendron aralioides HOM05D004734 ORTHO05D006019 3.8e-20 101.7 79 64.6
AL4G28410 Arabidopsis lyrata HOM05D004734 ORTHO05D006019 6.5e-20 100.9 88 62.5
Carub.0004s1431 Capsella rubella HOM05D004734 ORTHO05D006019 6.5e-20 100.9 99 60.6
Lsat_1_v5_gn_7_94920 Lactuca sativa HOM05D004734 ORTHO05D006019 6.5e-20 100.9 90 61.1
Sp4g15270 Schrenkiella parvula HOM05D004734 ORTHO05D006019 6.5e-20 100.9 80 67.5
vmacro12148 Vaccinium macrocarpon HOM05D004734 ORTHO05D006019 8.5e-20 100.5 95 57.9
HanXRQChr16g0508221 Helianthus annuus HOM05D004734 ORTHO05D006019 1.5e-19 99.8 80 65.0
BraA05t20212Z Brassica rapa HOM05D004734 ORTHO05D006019 1.9e-19 99.4 80 65.0
Thhalv10016293m.g Eutrema salsugineum HOM05D004734 ORTHO05D006019 1.9e-19 99.4 99 61.6
C04p16650 Brassica napus HOM05D004734 ORTHO05D006019 2.5e-19 99.0 80 63.8
BolC4t23215H Brassica oleracea HOM05D004734 ORTHO05D006019 2.5e-19 99.0 80 63.8
SGA_v2.0_scaffold73G24401 Striga asiatica HOM05D004734 ORTHO05D006019 2.5e-19 99.0 80 61.2
BcaB02g10504 Brassica carinata HOM05D004734 ORTHO05D006019 3.2e-19 98.6 80 65.0
A03p18530 Brassica napus HOM05D004734 ORTHO05D006019 3.2e-19 98.6 85 61.2
BraA03t11112Z Brassica rapa HOM05D004734 ORTHO05D006019 3.2e-19 98.6 85 61.2
CARHR126840 Cardamine hirsuta HOM05D004734 ORTHO05D006019 3.2e-19 98.6 99 61.6
PSO017G2150 Papaver somniferum HOM05D004734 ORTHO05D006019 4.2e-19 98.2 86 60.5
HanXRQChr14g0438421 Helianthus annuus HOM05D004734 ORTHO05D006019 5.5e-19 97.8 95 57.9
Eucgr.A01088 Eucalyptus grandis HOM05D004734 ORTHO05D006019 2.1e-18 95.9 99 52.5
BcaB01g03944 Brassica carinata HOM05D004734 ORTHO05D006019 2.7e-18 95.5 104 55.8
MBI16_g26176_MAGBIO Magnolia biondii HOM05D004734 ORTHO05D006019 2.7e-18 95.5 80 58.8
ECA236G2537 Erigeron canadensis HOM05D004734 ORTHO05D006019 1.0e-17 93.6 80 62.5
PSO675G0915 Papaver somniferum HOM05D004734 ORTHO05D006019 1.0e-17 93.6 79 59.5
SHI10094 Sapria himalayana HOM05D004734 ORTHO05D006019 1.4e-17 93.2 77 57.1
CDE07G0136 Ceratophyllum demersum HOM05D004734 ORTHO05D006019 1.8e-17 92.8 82 54.9
BcaC01g05869 Brassica carinata HOM05D004734 ORTHO05D006019 3.0e-17 92.0 104 53.8
C03p21580 Brassica napus HOM05D004734 ORTHO05D006019 3.0e-17 92.0 104 53.8
BolC3t14542H Brassica oleracea HOM05D004734 ORTHO05D006019 3.0e-17 92.0 104 53.8
SEGI_13952 Sequoiadendron giganteum HOM05D004734 ORTHO05D006019 2.0e-16 89.4 75 57.3
Psat5g176200 Pisum sativum HOM05D004734 ORTHO05D006019 4.1e-14 81.6 49 87.8
HPP92_000196 Vanilla planifolia HOM05D004734 ORTHO05D006019 5.3e-14 81.3 73 53.4
HPP92_000240 Vanilla planifolia HOM05D004734 ORTHO05D006019 1.2e-13 80.1 73 52.1
Zm00001eb114880 Zea mays HOM05D004734 ORTHO05D006019 4.5e-13 78.2 79 46.8
COL.COLO4_07254 Corchorus olitorius HOM05D004734 ORTHO05D006019 1.7e-12 76.3 51 72.5
RcHm_v2.0_Chr1g0340141 Rosa chinensis HOM05D004734 ORTHO05D006019 2.2e-12 75.9 67 55.2
HPP92_028624 Vanilla planifolia HOM05D004734 ORTHO05D006019 4.2e-11 71.6 70 52.9
HPP92_028626 Vanilla planifolia HOM05D004734 ORTHO05D006019 4.2e-11 71.6 70 52.9
unitig_8.g4607 Utricularia gibba HOM05D004734 ORTHO05D006019 3.6e-10 68.6 49 69.4
Hund08442 Selenicereus undatus HOM05D004734 ORTHO05D006019 1.8e-09 66.2 55 63.6
Mapoly0004s0108 Marchantia polymorpha HOM05D004734 ORTHO05D006019 1.3e-07 60.1 99 36.4
Rhsim06G0169400 Rhododendron simsii HOM05D004734 ORTHO05D006019 1.8e-06 56.2 37 70.3
SMO200G0072 Selaginella moellendorffii HOM05D004734 ORTHO05D006019 4.1e-06 55.1 97 33.0
Pp3c3_5560 Physcomitrium patens HOM05D004734 ORTHO05D006019 9.1e-06 53.9 76 34.2


User provided reference genes

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