Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31187_v3 Cicer arietinum L. HOM05D002740 ORTHO05D003126 2.5e-127 458.8 225 100.0
Pp3s155_110 Physcomitrium patens HOM05D000068 ORTHO05D016537 1.2e-20 104.4 192 29.7
Zm00001eb175630 Zea mays HOM05D002740 ORTHO05D003126 1.0e-16 91.3 212 31.6
Ah.02g118370 Amaranthus hybridus HOM05D002740 ORTHO05D003126 1.5e-15 87.4 227 29.1
Zm00001eb038600 Zea mays HOM05D002740 ORTHO05D003126 4.4e-15 85.9 210 29.5
Sc09g0001850 Simmondsia chinensis HOM05D002740 ORTHO05D003126 1.3e-14 84.3 212 29.7
AUR62000632 Chenopodium quinoa HOM05D002740 ORTHO05D003126 2.2e-14 83.6 212 29.7
AUR62006985 Chenopodium quinoa HOM05D002740 ORTHO05D003126 3.7e-14 82.8 212 29.7
EL10Ac4g09762 Beta vulgaris HOM05D002740 ORTHO05D003126 4.8e-14 82.4 212 28.3
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 6.3e-14 82.0 216 28.7
MSTRG.8171 Avicennia marina HOM05D002740 ORTHO05D003126 1.8e-13 80.5 225 29.8
Aqoxy5G00131 Aquilegia oxysepala HOM05D002740 ORTHO05D003126 3.1e-13 79.7 211 28.0
MELO3C010087.2 Cucumis melo HOM05D002740 ORTHO05D003126 3.1e-13 79.7 211 28.9
Nn1g02994 Nelumbo nucifera HOM05D002740 ORTHO05D003126 3.1e-13 79.7 209 28.7
Ah.06g187970 Amaranthus hybridus HOM05D002740 ORTHO05D003126 7.0e-13 78.6 211 31.3
Eucgr.H04213 Eucalyptus grandis HOM05D002740 ORTHO05D003126 7.0e-13 78.6 209 29.2
TWI60G0984 Tripterygium wilfordii HOM05D002740 ORTHO05D003126 7.0e-13 78.6 209 28.7
CiPaw.07G070800 Carya illinoinensis HOM05D002740 ORTHO05D003126 9.1e-13 78.2 219 27.9
CsaV3_1G045030 Cucumis sativus L. HOM05D002740 ORTHO05D003126 9.1e-13 78.2 211 28.9
ATR0787G107 Amborella trichopoda HOM05D002740 ORTHO05D003126 1.2e-12 77.8 212 29.7
Phvul.008G137801 Phaseolus vulgaris HOM05D002740 ORTHO05D003126 1.2e-12 77.8 219 26.9
Actinidia06833 Actinidia chinensis HOM05D002740 ORTHO05D003126 2.0e-12 77.0 217 28.1
AagrBONN_evm.TU.Sc2ySwM_228.5264 Anthoceros agrestis HOM05D002740 ORTHO05D003126 2.6e-12 76.6 237 27.8
CAN.G94.6 Capsicum annuum HOM05D002740 ORTHO05D003126 2.6e-12 76.6 210 28.6
Cc09_g02980 Coffea canephora HOM05D002740 ORTHO05D003126 2.6e-12 76.6 209 27.8
ClCG03G011470 Citrullus lanatus HOM05D002740 ORTHO05D003126 3.5e-12 76.3 211 28.4
Migut.F02056 Erythranthe guttata HOM05D002740 ORTHO05D003126 3.5e-12 76.3 209 29.2
Nitab4.5_0000841g0010 Nicotiana tabacum HOM05D002740 ORTHO05D003126 3.5e-12 76.3 206 28.6
Oeu010185.1 Olea europaea HOM05D002740 ORTHO05D003126 3.5e-12 76.3 224 27.2
Lj5g0022875 Lotus japonicus HOM05D002740 ORTHO05D003126 4.5e-12 75.9 217 28.1
Sopen04g020910 Solanum pennellii HOM05D002740 ORTHO05D003126 4.5e-12 75.9 210 28.6
CDE08G1574 Ceratophyllum demersum HOM05D002740 ORTHO05D003126 5.9e-12 75.5 205 28.3
Os08g0566000 Oryza sativa ssp. japonica HOM05D002740 ORTHO05D003126 5.9e-12 75.5 212 28.3
AagrBONN_evm.TU.Sc2ySwM_228.5261 Anthoceros agrestis HOM05D002740 ORTHO05D003126 7.7e-12 75.1 231 28.1
HanXRQChr11g0327251 Helianthus annuus HOM05D002740 ORTHO05D003126 7.7e-12 75.1 214 28.0
Lalb_Chr02g0148991 Lupinus albus HOM05D002740 ORTHO05D003126 7.7e-12 75.1 213 28.6
Nitab4.5_0002088g0010 Nicotiana tabacum HOM05D002740 ORTHO05D003126 1.0e-11 74.7 206 28.2
Solyc04g050190.4 Solanum lycopersicum HOM05D002740 ORTHO05D003126 1.3e-11 74.3 210 28.1
VMungo0720G1032 Vigna mungo HOM05D002740 ORTHO05D003126 1.3e-11 74.3 219 26.5
TAR636G2335 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.7e-11 73.9 213 28.2
PSO832G0576 Papaver somniferum HOM05D002740 ORTHO05D003126 2.9e-11 73.2 211 28.0
CDE02G1172 Ceratophyllum demersum HOM05D002740 ORTHO05D003126 3.8e-11 72.8 205 27.8
Sed0005304 Sechium edule HOM05D002740 ORTHO05D003126 6.5e-11 72.0 212 28.3
TAR365G0402 Trochodendron aralioides HOM05D002740 ORTHO05D003126 6.5e-11 72.0 207 28.5
TWI32G1314 Tripterygium wilfordii HOM05D002740 ORTHO05D003126 8.5e-11 71.6 209 27.8
PSO764G0261 Papaver somniferum HOM05D002740 ORTHO05D003126 1.1e-10 71.2 211 27.5
Nitab4.5_0010891g0030 Nicotiana tabacum HOM05D002740 ORTHO05D003126 1.5e-10 70.9 215 28.4
Aa31LG9G18030 Aethionema arabicum HOM05D002740 ORTHO05D003126 1.9e-10 70.5 209 25.8
THA.LOC104823789 Tarenaya hassleriana HOM05D002740 ORTHO05D003126 1.9e-10 70.5 204 27.0
Cre08.g365600 Chlamydomonas reinhardtii HOM05D005536 ORTHO05D006999 3.2e-10 69.7 202 28.7
TAR365G1151 Trochodendron aralioides HOM05D002740 ORTHO05D003126 3.2e-10 69.7 207 28.0
HPP92_025821 Vanilla planifolia HOM05D002740 ORTHO05D003126 5.5e-10 68.9 212 26.9
Nn3g19799 Nelumbo nucifera HOM05D002740 ORTHO05D003126 7.2e-10 68.6 211 26.1
Gorai.004G249600 Gossypium raimondii HOM05D002740 ORTHO05D003126 1.2e-09 67.8 217 25.8
TAR633G0934 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.2e-09 67.8 213 26.8
SGA_v2.0_scaffold62G21468 Striga asiatica HOM05D002740 ORTHO05D003126 1.6e-09 67.4 234 26.9
FAN15G0236 Fragaria x ananassa HOM05D002740 ORTHO05D003126 2.1e-09 67.0 207 29.0
FAN27G2178 Fragaria x ananassa HOM05D002740 ORTHO05D003126 2.7e-09 66.6 207 29.0
Gohir.D08G234800 Gossypium hirsutum HOM05D002740 ORTHO05D003126 4.7e-09 65.9 217 25.3
FvH4_2g20480 Fragaria vesca HOM05D002740 ORTHO05D003126 8.0e-09 65.1 207 29.0
FAN24G0357 Fragaria x ananassa HOM05D002740 ORTHO05D003126 8.0e-09 65.1 207 29.0
GSVIVG01028433001 Vitis vinifera HOM05D002740 ORTHO05D003126 8.0e-09 65.1 196 25.5
Manes.09G146900 Manihot esculenta HOM05D002740 ORTHO05D003126 1.0e-08 64.7 214 25.2
Actinidia37554 Actinidia chinensis HOM05D002740 ORTHO05D003126 1.4e-08 64.3 213 27.2
CiPaw.03G271200 Carya illinoinensis HOM05D002740 ORTHO05D003126 1.8e-08 63.9 215 27.4
Dinv19266 Davidia involucrata HOM05D002740 ORTHO05D003126 2.3e-08 63.5 211 25.6
MBI07_g08913_MAGBIO Magnolia biondii HOM05D004684 ORTHO05D006904 5.2e-08 62.4 210 26.2
Cpa.g.sc87.32 Carica papaya HOM05D002740 ORTHO05D003126 2.0e-07 60.5 212 26.4
MSTRG.12516 Avicennia marina HOM05D002740 ORTHO05D003126 3.3e-07 59.7 229 27.1
Cpa.g.sc51.3 Carica papaya HOM05D002740 ORTHO05D003126 3.3e-07 59.7 143 30.8
FAN01G0416 Fragaria x ananassa HOM05D002740 ORTHO05D003126 3.3e-07 59.7 185 24.9
Lj1A74G101 Lonicera japonica HOM05D002740 ORTHO05D003126 3.3e-07 59.7 219 25.1
Oeu052082.1 Olea europaea HOM05D002740 ORTHO05D003126 4.4e-07 59.3 220 23.6
RcHm_v2.0_Chr6g0286581 Rosa chinensis HOM05D002740 ORTHO05D003126 4.4e-07 59.3 208 26.4
SalBow1G0650 Salvia bowleyana HOM05D002740 ORTHO05D003126 9.7e-07 58.2 214 27.1
Migut.N02233 Erythranthe guttata HOM05D002740 ORTHO05D003126 1.3e-06 57.8 239 26.4
Gohir.A07G152600 Gossypium hirsutum HOM05D002740 ORTHO05D003126 1.7e-06 57.4 211 26.5
Gohir.D07G158800 Gossypium hirsutum HOM05D002740 ORTHO05D003126 2.2e-06 57.0 211 26.1
Gorai.001G182000 Gossypium raimondii HOM05D002740 ORTHO05D003126 2.2e-06 57.0 211 26.1
vmacro02711 Vaccinium macrocarpon HOM05D002740 ORTHO05D003126 2.2e-06 57.0 215 26.0
Thecc.01G249900 Theobroma cacao HOM05D002740 ORTHO05D003126 2.8e-06 56.6 211 25.6
Solyc05g055900.3 Solanum lycopersicum HOM05D002740 ORTHO05D003126 6.3e-06 55.5 225 24.9
Sc16g0009790 Simmondsia chinensis HOM05D002740 ORTHO05D003126 8.2e-06 55.1 212 27.4


User provided reference genes

Program Settings