Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31107_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 8.2e-126 453.8 232 100.0
Ca_13883_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.5e-92 341.7 234 78.6
Ca_14478_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 6.8e-80 301.2 232 70.7
TWI23G0203 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.6e-44 182.2 240 46.7
Hma1.2p1_0661F.1_g197850 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.1e-41 171.4 187 52.9
Ca_31123_v3 Cicer arietinum L. HOM05D016232 ORTHO05D000014 2.0e-39 166.8 115 76.5
Hma1.2p1_0222F.1_g093680 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.3e-37 157.9 200 48.0
Hma1.2p1_0017F.1_g011150 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.1e-36 156.8 245 39.6
RcHm_v2.0_Chr7g0223471 Rosa chinensis HOM05D000023 ORTHO05D002258 8.7e-35 151.4 188 45.2
Hma1.2p1_1937F.1_g308280 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.1e-34 151.0 221 44.8
Hma1.2p1_1425F.1_g282820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.1e-32 142.9 124 57.3
Hma1.2p1_0619F.1_g190370 Hydrangea macrophylla HOM05D000023 ORTHO05D002258 5.3e-32 142.1 188 47.9
Ca_02571_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 1.5e-31 140.6 66 97.0
Hund22389 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-30 137.1 248 40.3
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.8e-30 136.0 244 38.1
Hund08528 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.9e-27 125.9 128 52.3
Hma1.2p1_1578F.1_g291740 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.7e-27 125.2 116 55.2
Ca_26013_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 8.7e-27 124.8 66 89.4
Dinv07359 Davidia involucrata HOM05D000023 ORTHO05D018230 2.5e-26 123.2 236 38.6
Hma1.2p1_2537F.1_g324110 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.7e-26 121.3 74 75.7
Ah.02g120390 Amaranthus hybridus HOM05D000023 ORTHO05D000014 1.8e-24 117.1 124 52.4
COL.COLO4_06621 Corchorus olitorius HOM05D023965 ORTHO05D000014 9.0e-24 114.8 221 38.0
Hund20805 Selenicereus undatus HOM05D016232 ORTHO05D000014 2.2e-22 110.2 124 46.0
Hma1.2p1_0169F.1_g074660 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.2e-21 105.9 217 35.0
Hma1.2p1_0926F.1_g237530 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.6e-20 102.4 242 36.0
Hma1.2p1_0153F.1_g067820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.9e-19 99.4 247 31.2
Hma1.2p1_0084F.1_g042920 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-18 97.4 76 60.5
Hma1.2p1_0801F.1_g220220 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.3e-18 96.3 73 61.6
COL.COLO4_27211 Corchorus olitorius HOM05D000023 ORTHO05D000014 1.7e-17 94.0 73 58.9
Actinidia06841 Actinidia chinensis HOM05D000023 ORTHO05D000014 2.8e-17 93.2 71 62.0
Hma1.2p1_1081F.1_g255100 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.5e-15 85.9 56 71.4
Hma1.2p1_0006F.1_g004740 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.9e-13 80.5 96 43.8
Hma1.2p1_1264F.1_g271330 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.6e-12 77.4 93 38.7
FvH4_4g35171 Fragaria vesca HOM05D000023 ORTHO05D000014 2.7e-12 76.6 96 45.8
RhsimUnG0210600 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.7e-12 76.6 77 46.8
PSO170G2584 Papaver somniferum HOM05D000023 ORTHO05D000014 6.1e-12 75.5 77 50.6
PSO500G0158 Papaver somniferum HOM05D000023 ORTHO05D000014 6.1e-12 75.5 77 50.6
COL.COLO4_35554 Corchorus olitorius HOM05D000023 ORTHO05D000014 7.9e-12 75.1 155 34.8
PSO591G0023 Papaver somniferum HOM05D000023 ORTHO05D000014 7.9e-12 75.1 77 50.6
RhsimUnG0179600 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.9e-12 75.1 77 45.5
SEGI_15194 Sequoiadendron giganteum HOM05D010104 ORTHO05D000014 1.0e-11 74.7 138 34.1
CSS0029210 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.8e-11 73.9 78 43.6
PSO063G5350 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-11 73.9 77 49.4
SEGI_06975 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.8e-11 73.9 80 42.5
SEGI_28317 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 1.8e-11 73.9 80 42.5
Ca_19810_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 2.3e-11 73.6 42 81.0
AUR62042193 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.0e-11 73.2 115 36.5
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.9e-11 72.8 78 47.4
Hma1.2p1_0400F.1_g144380 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.1e-11 72.4 146 28.8
Rhsim05G0125600 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.7e-11 72.0 126 35.7
CSS0003700 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 8.8e-11 71.6 84 41.7
vmacro01190 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 8.8e-11 71.6 83 41.0
vmacro22609 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 8.8e-11 71.6 83 41.0
Hma1.2p1_0139F.1_g063210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.1e-10 71.2 50 66.0
Rhsim02G0002400 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-10 71.2 126 35.7
Hma1.2p1_0191F.1_g083200 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-10 70.9 67 49.3
SEGI_36132 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-10 70.9 90 41.1
AUR62042294 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.0e-10 70.5 115 35.7
AUR62043939 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.0e-10 70.5 115 35.7
SEGI_02209 Sequoiadendron giganteum HOM05D002022 ORTHO05D000014 2.6e-10 70.1 80 40.0
SEGI_02520 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.6e-10 70.1 80 41.2
Ah.02g121500 Amaranthus hybridus HOM05D000023 ORTHO05D000014 3.3e-10 69.7 64 50.0
vmacro15507 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 4.4e-10 69.3 78 42.3
SEGI_17547 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-09 67.8 80 40.0
vmacro00523 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.2e-09 67.0 78 41.0
vmacro21301 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.8e-09 66.6 109 36.7
vmacro21302 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.8e-09 66.6 109 36.7
HPP92_024951 Vanilla planifolia HOM05D000023 ORTHO05D000014 2.8e-09 66.6 140 33.6
HPP92_026521 Vanilla planifolia HOM05D000023 ORTHO05D000014 2.8e-09 66.6 140 33.6
ATR0991G005 Amborella trichopoda HOM05D000023 ORTHO05D000014 3.7e-09 66.2 105 36.2
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 3.7e-09 66.2 92 39.1
SEGI_35826 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.8e-09 65.9 80 43.8
ATR1159G080 Amborella trichopoda HOM05D000023 ORTHO05D000014 6.3e-09 65.5 75 44.0
SEGI_20337 Sequoiadendron giganteum HOM05D010104 ORTHO05D000014 8.2e-09 65.1 70 47.1
SEGI_29766 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 8.2e-09 65.1 81 42.0
COL.COLO4_37695 Corchorus olitorius HOM05D000023 ORTHO05D000014 1.1e-08 64.7 236 29.2
FvH4_3g24081 Fragaria vesca HOM05D000003 ORTHO05D000022 1.1e-08 64.7 57 63.2
Rhsim05G0106100 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-08 64.7 165 29.7
ATR0693G388 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.4e-08 64.3 88 40.9
SEGI_02352 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.4e-08 64.3 80 38.8
ATR0464G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 1.8e-08 63.9 75 41.3
vmacro21168 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.1e-08 63.2 66 43.9
RhsimUnG0179400 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.0e-08 62.0 57 47.4
vmacro21165 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 7.0e-08 62.0 64 46.9
QL02p052017 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
QL02p079277 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
QL04p042141 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
QL05p053353 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
QL06p001114 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
QL06p025366 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
QL10p053741 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
QL11p043807 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
QL11p051169 Quercus lobata HOM05D000023 ORTHO05D000014 9.1e-08 61.6 92 38.0
Ah.14g084590 Amaranthus hybridus HOM05D001418 ORTHO05D002038 1.2e-07 61.2 76 38.2
vmacro03238 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.2e-07 61.2 80 42.5
SEGI_32590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-07 60.8 76 38.2
ATR0495G004 Amborella trichopoda HOM05D000023 ORTHO05D000014 2.6e-07 60.1 75 40.0
arahy.Tifrunner.gnm1.ann1.LZ7HA6 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.6e-07 60.1 157 26.8
SEGI_01977 Sequoiadendron giganteum HOM05D002039 ORTHO05D005834 2.6e-07 60.1 90 37.8
QL10p011687 Quercus lobata HOM05D000023 ORTHO05D000014 3.4e-07 59.7 91 36.3
Ah.10g026540 Amaranthus hybridus HOM05D057872 ORTHO05D000014 5.9e-07 58.9 70 51.4
ATR0495G021 Amborella trichopoda HOM05D000023 ORTHO05D000014 5.9e-07 58.9 75 41.3
arahy.Tifrunner.gnm1.ann1.1V5VYE Arachis hypogaea HOM05D000023 ORTHO05D000014 5.9e-07 58.9 157 26.1
ECA233G1350 Erigeron canadensis HOM05D000023 ORTHO05D000001 5.9e-07 58.9 135 31.1
Lj2g0007711 Lotus japonicus HOM05D000023 ORTHO05D000014 5.9e-07 58.9 127 33.1
arahy.Tifrunner.gnm1.ann1.3H2HJM Arachis hypogaea HOM05D000023 ORTHO05D000014 7.7e-07 58.5 132 28.0
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.7e-07 58.5 99 33.3
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.0e-06 58.2 104 31.7
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.0e-06 58.2 104 31.7
ECA233G4406 Erigeron canadensis HOM05D000131 ORTHO05D000014 1.0e-06 58.2 131 32.8
Lj6g0019681 Lotus japonicus HOM05D000023 ORTHO05D000014 1.0e-06 58.2 84 35.7
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 1.3e-06 57.8 132 27.3
BolC4t23848H Brassica oleracea HOM05D000023 ORTHO05D000014 1.3e-06 57.8 111 31.5
CSS0002975 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.3e-06 57.8 82 34.1
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-06 57.8 99 32.3
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-06 57.8 99 32.3
AUR62022259 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-06 57.8 99 32.3
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-06 57.8 99 32.3
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-06 57.8 99 32.3
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-06 57.8 99 32.3
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-06 57.8 99 32.3
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-06 57.8 99 32.3
Rhsim04G0118200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.3e-06 57.8 59 47.5
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-06 57.4 132 27.3
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-06 57.4 132 27.3
arahy.Tifrunner.gnm1.ann1.KV4G29 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-06 57.4 132 27.3
arahy.Tifrunner.gnm1.ann1.QM4BK9 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.7e-06 57.4 132 27.3
CSS0031929 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.7e-06 57.4 82 34.1
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.7e-06 57.4 99 32.3
AUR62034981 Chenopodium quinoa HOM05D000779 ORTHO05D000246 1.7e-06 57.4 104 31.7
SEGI_09264 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.7e-06 57.4 73 37.0
SEGI_32036 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.7e-06 57.4 81 37.0
arahy.Tifrunner.gnm1.ann1.UX9V95 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.2e-06 57.0 132 28.0
SEGI_18045 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.2e-06 57.0 68 38.2
SEGI_20252 Sequoiadendron giganteum HOM05D000861 ORTHO05D007385 2.2e-06 57.0 81 39.5
SEGI_28721 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.2e-06 57.0 76 35.5
CSS0048742 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.9e-06 56.6 82 34.1
AUR62019609 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.9e-06 56.6 99 32.3
AUR62038522 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.9e-06 56.6 99 31.3
AUR62041775 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.9e-06 56.6 99 32.3
QL06p009534 Quercus lobata HOM05D000132 ORTHO05D000014 2.9e-06 56.6 91 34.1
arahy.Tifrunner.gnm1.ann1.47Q9LE Arachis hypogaea HOM05D000023 ORTHO05D000014 3.8e-06 56.2 132 28.0
arahy.Tifrunner.gnm1.ann1.HID98C Arachis hypogaea HOM05D000023 ORTHO05D000014 3.8e-06 56.2 132 26.5
AUR62011831 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.8e-06 56.2 99 31.3
SEGI_39341 Sequoiadendron giganteum HOM05D000112 ORTHO05D000014 3.8e-06 56.2 90 35.6
Ah.02g119120 Amaranthus hybridus HOM05D000023 ORTHO05D002258 5.0e-06 55.8 42 61.9
ATR0495G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 5.0e-06 55.8 75 41.3
SEGI_32192 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.0e-06 55.8 111 28.8
C04p23460 Brassica napus HOM05D000023 ORTHO05D000014 6.5e-06 55.5 111 30.6
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 6.5e-06 55.5 90 37.8
FvH4_5g23531 Fragaria vesca HOM05D000023 ORTHO05D000014 6.5e-06 55.5 90 37.8
Os02g0513700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 6.5e-06 55.5 82 40.2
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 6.5e-06 55.5 82 40.2
ATR0448G001 Amborella trichopoda HOM05D000023 ORTHO05D000014 8.5e-06 55.1 65 43.1
SHI32734 Sapria himalayana HOM05D000023 ORTHO05D000014 8.5e-06 55.1 90 34.4


User provided reference genes

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