Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31023_v3 Cicer arietinum L. HOM05D008089 ORTHO05D000166 3.3e-164 581.6 294 100.0
Ca_02497_v3 Cicer arietinum L. HOM05D008089 ORTHO05D000166 5.4e-58 228.8 227 55.1
Ca_02546_v3 Cicer arietinum L. HOM05D008089 ORTHO05D000166 2.1e-57 226.9 243 52.7
TPR.G23696 Trifolium pratense HOM05D008089 ORTHO05D000166 2.2e-35 153.7 300 35.3
TPR.G23685 Trifolium pratense HOM05D008089 ORTHO05D000166 5.5e-34 149.1 323 35.3
TPR.G23667 Trifolium pratense HOM05D008089 ORTHO05D000166 5.7e-31 139.0 307 34.9
Ca_04905_v3 Cicer arietinum L. HOM05D008089 ORTHO05D000166 8.2e-30 135.2 305 32.8
Ca_27244_v3 Cicer arietinum L. HOM05D008089 ORTHO05D000166 8.2e-30 135.2 305 32.1
Psat1g133560 Pisum sativum HOM05D008089 ORTHO05D026066 5.0e-27 125.9 295 31.9
Medtr4g045977 Medicago truncatula HOM05D008089 ORTHO05D000166 5.7e-23 112.5 296 30.7
TPR.G1875 Trifolium pratense HOM05D008089 ORTHO05D000166 2.2e-22 110.5 295 31.9
TPR.G1873 Trifolium pratense HOM05D008089 ORTHO05D000166 2.8e-22 110.2 113 53.1
Medtr2g049610 Medicago truncatula HOM05D008089 ORTHO05D000166 3.1e-21 106.7 171 36.3
Medtr4g107170 Medicago truncatula HOM05D008089 ORTHO05D000166 5.3e-21 105.9 157 37.6
TPR.G28062 Trifolium pratense HOM05D008089 ORTHO05D000166 5.9e-20 102.4 130 42.3
Medtr2g049630 Medicago truncatula HOM05D008089 ORTHO05D000166 1.7e-19 100.9 316 32.3
TPR.G28961 Trifolium pratense HOM05D008089 ORTHO05D000166 3.2e-18 96.7 302 29.5
Glyma.13G045500 Glycine max HOM05D008089 ORTHO05D000166 7.2e-18 95.5 204 34.3
Medtr2g049530 Medicago truncatula HOM05D008089 ORTHO05D000166 1.6e-17 94.4 90 54.4
Lj1g0019614 Lotus japonicus HOM05D008089 ORTHO05D000166 6.1e-17 92.4 228 34.2
TPR.G30022 Trifolium pratense HOM05D008089 ORTHO05D026066 3.9e-16 89.7 245 29.0
Glyma.19G047600 Glycine max HOM05D008089 ORTHO05D000166 5.7e-15 85.9 295 28.5
Glyma.19G051700 Glycine max HOM05D008089 ORTHO05D000166 1.7e-14 84.3 210 32.9
Lj6g0011242 Lotus japonicus HOM05D008089 ORTHO05D000166 4.8e-14 82.8 156 34.6
Phvul.005G017200 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 4.8e-14 82.8 128 40.6
Lj2g0013276 Lotus japonicus HOM05D008089 ORTHO05D000166 8.2e-14 82.0 253 29.6
Phvul.004G061300 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 8.2e-14 82.0 158 38.6
TPR.G6617 Trifolium pratense HOM05D008089 ORTHO05D000166 1.1e-13 81.6 84 45.2
Glyma.15G196300 Glycine max HOM05D008089 ORTHO05D000166 4.1e-13 79.7 132 37.1
Phvul.004G060500 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 7.0e-13 79.0 233 30.9
TPR.G6633 Trifolium pratense HOM05D008089 ORTHO05D000166 9.1e-13 78.6 84 42.9
TPR.G7340 Trifolium pratense HOM05D008089 ORTHO05D000166 9.1e-13 78.6 77 51.9
Phvul.004G060700 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 1.2e-12 78.2 171 36.8
Phvul.004G060600 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 3.5e-12 76.6 139 36.7
Phvul.004G060900 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 3.5e-12 76.6 157 36.9
Phvul.004G061600 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 1.0e-11 75.1 158 36.1
TPR.G23694 Trifolium pratense HOM05D008089 ORTHO05D026066 1.0e-11 75.1 212 30.2
arahy.Tifrunner.gnm1.ann1.G9T3SU Arachis hypogaea HOM05D008089 ORTHO05D000166 1.3e-11 74.7 92 41.3
Lalb_Chr08g0233261 Lupinus albus HOM05D008089 ORTHO05D000166 1.3e-11 74.7 147 34.0
Phvul.004G061500 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 3.8e-11 73.2 161 32.9
Glyma.19G045900 Glycine max HOM05D008089 ORTHO05D000166 6.5e-11 72.4 223 29.6
arahy.Tifrunner.gnm1.ann1.4RS8DG Arachis hypogaea HOM05D008089 ORTHO05D000166 8.5e-11 72.0 216 29.6
Lj1g0009381 Lotus japonicus HOM05D008089 ORTHO05D000166 8.5e-11 72.0 123 35.8
Lalb_Chr11g0073241 Lupinus albus HOM05D008089 ORTHO05D000166 8.5e-11 72.0 165 33.3
Medtr1g115290 Medicago truncatula HOM05D008089 ORTHO05D000166 8.5e-11 72.0 118 38.1
Lalb_Chr08g0233361 Lupinus albus HOM05D008089 ORTHO05D000166 1.9e-10 70.9 120 35.8
TPR.G7343 Trifolium pratense HOM05D008089 ORTHO05D000166 1.9e-10 70.9 68 52.9
Phvul.004G061100 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 4.2e-10 69.7 153 35.9
Phvul.009G213800 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 5.5e-10 69.3 200 26.0
Lj6g0015605 Lotus japonicus HOM05D008089 ORTHO05D000166 9.4e-10 68.6 134 32.1
VMungo1080G1585 Vigna mungo HOM05D008089 ORTHO05D000166 1.2e-09 68.2 225 25.3
VMungo1309G0257 Vigna mungo HOM05D008089 ORTHO05D000166 1.6e-09 67.8 197 28.4
arahy.Tifrunner.gnm1.ann1.UG5UID Arachis hypogaea HOM05D008089 ORTHO05D000166 2.7e-09 67.0 92 37.0
Lj1g0015182 Lotus japonicus HOM05D008089 ORTHO05D000166 6.1e-09 65.9 95 37.9
Medtr6g005450 Medicago truncatula HOM05D008089 ORTHO05D000166 1.8e-08 64.3 136 30.1
arahy.Tifrunner.gnm1.ann1.PV8IVT Arachis hypogaea HOM05D008089 ORTHO05D000166 2.3e-08 63.9 116 35.3
arahy.Tifrunner.gnm1.ann1.Q9AYPR Arachis hypogaea HOM05D008089 ORTHO05D000166 5.2e-08 62.8 213 26.8
Phvul.004G061000 Phaseolus vulgaris HOM05D008089 ORTHO05D000166 8.8e-08 62.0 212 29.2
Ca_13731_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 2.0e-07 60.8 134 26.9
Lj5g0004947 Lotus japonicus HOM05D000307 ORTHO05D000166 2.6e-07 60.5 67 44.8
Lj5g0023944 Lotus japonicus HOM05D000307 ORTHO05D000166 2.6e-07 60.5 67 44.8
TPR.G1441 Trifolium pratense HOM05D000307 ORTHO05D000166 4.4e-07 59.7 135 27.4
Lj1g0022539 Lotus japonicus HOM05D008089 ORTHO05D000166 7.5e-07 58.9 67 44.8
TPR.G32449 Trifolium pratense HOM05D000307 ORTHO05D000166 7.5e-07 58.9 67 40.3
VMungo0647G1946 Vigna mungo HOM05D008089 ORTHO05D000166 7.5e-07 58.9 103 29.1
Medtr6g005440 Medicago truncatula HOM05D008089 ORTHO05D000166 9.7e-07 58.5 125 28.8
Psat1g082000 Pisum sativum HOM05D000307 ORTHO05D000166 9.7e-07 58.5 236 24.2
TPR.G26403 Trifolium pratense HOM05D008089 ORTHO05D000166 1.7e-06 57.8 83 34.9
Glyma.08G095300 Glycine max HOM05D008089 ORTHO05D000166 2.8e-06 57.0 83 33.7
Lalb_Chr23g0265491 Lupinus albus HOM05D000307 ORTHO05D000166 3.7e-06 56.6 106 29.2
Glyma.05G140000 Glycine max HOM05D000307 ORTHO05D000166 4.8e-06 56.2 83 33.7
Medtr6g018920 Medicago truncatula HOM05D000307 ORTHO05D000166 4.8e-06 56.2 74 37.8
VMungo0251G0242 Vigna mungo HOM05D008089 ORTHO05D000166 4.8e-06 56.2 123 27.6
Lalb_Chr05g0223381 Lupinus albus HOM05D000307 ORTHO05D000166 8.2e-06 55.5 226 25.7


User provided reference genes

Program Settings